Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d052103_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:179678569:179682211:1 gene:Zm00001d052103 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin lyase-like superfamily protein
Sequence	ATGGTGGACACGGGCGGGGGGAGGCTCTACCAGCGCCGTGGCGCGGTCGCTTTCGTCGCG GCCAACAAGGCGCTGCTCGCCGCTGCGTGGGTCGTCGGGTTCGCGCTCGTGTTCCTATGG CAGAGCGCCTCCATGTCCTTCGGCAGCGCCGGCGGCGGAGGGTACCTCAGGCTCCTGTCG GTGCCGCCTCCGCCGCCGCGCCCCGCGCCGCGGCTCCGCCCCACGGCGTACAACATCACG GACTTCGGCGCCGTCGGGGACGGCCGGGCGGTCAACACCGCGGCGTTCGAGCGTGCTGTC GAGGCCATCGCGGCGCTCGCGGAGCGAGGCGGCGGGCAGCTCAATGTGCCACCCGGGCGC TGGCTCACGGCACCCTTCAACCTCACCAGCCACATGACGCTGTTTCTTGCCGAGGGCGCG GAAATCCTTGGCATTACGGATGAGAAGTACTGGCCATTGATGCCAGCATTACCGTCATAT GGGTATGGGCGGGAGCGCAAAGGACCACGATTTGGGAGCCTCATTCATGGACAGAATTTG AGAGATGTAGTCATTACAGGACATAATGGGAGCATAAATGGCCAGGGTGAAGTTTGGTGG ATGAAGCATCGCAGAAGAATTCTGAATAACACAAGGCCTCCTCTTGTGCAGCTGATGTGG TCCAAGGACATTATTGTTGCAAACATAACACTGAGGAACTCACCTTTCTGGCACTTGCAT CCTTATGATTGCACAAATGTGACTGTTTCGAATGTTACTATCATGTCTCCTGTTTCTGGT GCTCCAAACACAGATGGCATAGATCCAGATTCTTGTCAGGATGTGCTTATTGAGAATTGC TACATATCGGTTGGCGATGATGCAATAGCTATAAAGAGTGGTTGGGATCAGTATGGTATT GCATACGGTCGTCCATCTTCTGACATTTTAATTCGCAATGTAACCGCCCGTTCTCTTGTG AGTGCTGGAATTTCAATAGGCAGTGAGATGTCTGGCGGAGTTGCAAATGTTACTGTGGAG AATGTGCGCATCTGGGAATCAAGGAGAGGTGTGAGGATAAAGACTGCCACAGGAAGAGGC GGCTACATCCGTAACATCTCATACCGCAACATAACTTTCGACAATGTCCGTGCTGGGATT GTGATAAAGGTTGACTACAACGAGCACGCTGATGATGGATACGACCGGACTGCCTTCCCA GACATCACAAGCATATCATTCAAGGGAATCCATGGGCAGGGTGTTCGGGTGCCTGTCCGA GCTCATGGCAGCGACGTCATCCCCATCAAGGACATCAGCTTCCAGGACATGTCGGTAGGC ATCAGCTACAAGAAGAAGCACATCTTCCAGTGCTCCTACCTCGAGGGGCGTGTCATCAGG CCTGTGTTCCCGAAACCATGTGAGAACCTGGACGTCTATGATGAGCAAGGGCAGCTTGTG AAGCGGGCAGTGGCCCTAAACAGCACAGAACTTGACTACGATATATGA

Peptide Sequence

PEP ID	Zm00001d052103_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:179678569:179682211:1 gene:Zm00001d052103 transcript:Zm00001d052103_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin lyase-like superfamily protein
Sequence	MVDTGGGRLYQRRGAVAFVAANKALLAAAWVVGFALVFLWQSASMSFGSAGGGGYLRLLS VPPPPPRPAPRLRPTAYNITDFGAVGDGRAVNTAAFERAVEAIAALAERGGGQLNVPPGR WLTAPFNLTSHMTLFLAEGAEILGITDEKYWPLMPALPSYGYGRERKGPRFGSLIHGQNL RDVVITGHNGSINGQGEVWWMKHRRRILNNTRPPLVQLMWSKDIIVANITLRNSPFWHLH PYDCTNVTVSNVTIMSPVSGAPNTDGIDPDSCQDVLIENCYISVGDDAIAIKSGWDQYGI AYGRPSSDILIRNVTARSLVSAGISIGSEMSGGVANVTVENVRIWESRRGVRIKTATGRG GYIRNISYRNITFDNVRAGIVIKVDYNEHADDGYDRTAFPDITSISFKGIHGQGVRVPVR AHGSDVIPIKDISFQDMSVGISYKKKHIFQCSYLEGRVIRPVFPKPCENLDVYDEQGQLV KRAVALNSTELDYDI

Transcript Sequence

Transcript ID	Zm00001d052103_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:179678569:179682211:1 gene:Zm00001d052103 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin lyase-like superfamily protein
Sequence	GGCGCACACAAGTACACAACCACCCAAGATGGGGAGGAGCCAGGAGCACAGGCCCAATGC GGCAGCCATCCCACCACCTATCGCGTCGGCTTCACTCAAACGGCTTCTGCCGCATCCTAT AAAACCTCCTCACCAACCTCCGATGGCGGAAATTCTTGCCCTCCCACACCGACCCCCTCC CCCACGGCCCGCCTTCCCCCGGGAGCACGAGACCCTCGTTCCCTGCGCCACCGACTGAGC CAAGGCCGCGCTTTGCCGTTTCCGACCTAGGTCGCGAGATCTCGGAGGAGCGGAGCCCCG CCGTGCCGCCGCCTGCTACAGGGGGGCACGCAGGGACCGCACGGCGCGATGGTGGACACG GGCGGGGGGAGGCTCTACCAGCGCCGTGGCGCGGTCGCTTTCGTCGCGGCCAACAAGGCG CTGCTCGCCGCTGCGTGGGTCGTCGGGTTCGCGCTCGTGTTCCTATGGCAGAGCGCCTCC ATGTCCTTCGGCAGCGCCGGCGGCGGAGGGTACCTCAGGCTCCTGTCGGTGCCGCCTCCG CCGCCGCGCCCCGCGCCGCGGCTCCGCCCCACGGCGTACAACATCACGGACTTCGGCGCC GTCGGGGACGGCCGGGCGGTCAACACCGCGGCGTTCGAGCGTGCTGTCGAGGCCATCGCG GCGCTCGCGGAGCGAGGCGGCGGGCAGCTCAATGTGCCACCCGGGCGCTGGCTCACGGCA CCCTTCAACCTCACCAGCCACATGACGCTGTTTCTTGCCGAGGGCGCGGAAATCCTTGGC ATTACGGATGAGAAGTACTGGCCATTGATGCCAGCATTACCGTCATATGGGTATGGGCGG GAGCGCAAAGGACCACGATTTGGGAGCCTCATTCATGGACAGAATTTGAGAGATGTAGTC ATTACAGGACATAATGGGAGCATAAATGGCCAGGGTGAAGTTTGGTGGATGAAGCATCGC AGAAGAATTCTGAATAACACAAGGCCTCCTCTTGTGCAGCTGATGTGGTCCAAGGACATT ATTGTTGCAAACATAACACTGAGGAACTCACCTTTCTGGCACTTGCATCCTTATGATTGC ACAAATGTGACTGTTTCGAATGTTACTATCATGTCTCCTGTTTCTGGTGCTCCAAACACA GATGGCATAGATCCAGATTCTTGTCAGGATGTGCTTATTGAGAATTGCTACATATCGGTT GGCGATGATGCAATAGCTATAAAGAGTGGTTGGGATCAGTATGGTATTGCATACGGTCGT CCATCTTCTGACATTTTAATTCGCAATGTAACCGCCCGTTCTCTTGTGAGTGCTGGAATT TCAATAGGCAGTGAGATGTCTGGCGGAGTTGCAAATGTTACTGTGGAGAATGTGCGCATC TGGGAATCAAGGAGAGGTGTGAGGATAAAGACTGCCACAGGAAGAGGCGGCTACATCCGT AACATCTCATACCGCAACATAACTTTCGACAATGTCCGTGCTGGGATTGTGATAAAGGTT GACTACAACGAGCACGCTGATGATGGATACGACCGGACTGCCTTCCCAGACATCACAAGC ATATCATTCAAGGGAATCCATGGGCAGGGTGTTCGGGTGCCTGTCCGAGCTCATGGCAGC GACGTCATCCCCATCAAGGACATCAGCTTCCAGGACATGTCGGTAGGCATCAGCTACAAG AAGAAGCACATCTTCCAGTGCTCCTACCTCGAGGGGCGTGTCATCAGGCCTGTGTTCCCG AAACCATGTGAGAACCTGGACGTCTATGATGAGCAAGGGCAGCTTGTGAAGCGGGCAGTG GCCCTAAACAGCACAGAACTTGACTACGATATATGAGGTGCACATATCATACCACAGCTT TGATAGTTGTAGTGGAAATTGGTGCTCTCTACCCTCAGAAATCAATTTTCTCCGATTGTC CATGGCTTTTTGGGTCTAGAATTGTAGATAGAGAGGAGATTCTCCTCTTGATAGGTTTGC TGCTTACAGTGGCTGAATGTATCTCACCGGCGATTTACTGATTTGTCCATGAACATTTGT AATCGCCAGAACCTTCCTGGCGACAAATGTATGCTGTCAATATATTGTACACCTGAAGAT TGTATTGGAGTATACACAGTACATGATCTCTAAATATCTGCCAGCAGATTTTTC