Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d052098_T013
CDS Infomation	cds chromosome:B73_RefGen_v4:4:179503911:179530514:1 gene:Zm00001d052098 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable NOT transcription complex subunit VIP2
Sequence	ATGCCTCAGATTCCTCATGCACATTCAGGTGTCAGTGGTAGAGGGATGAATTTTGGCGCA GGTCCGGCATTTAGTAGCAGCATGAATATTGGTGGTAACATCCAAGGCTTATCCTCGGGC TTGGGCTCCGGTGGTAATCGCAATTCTGTTCATGGGATGCCAGTATCTTCATCTATAGGA AACTCGGGTCAACGGATAAGTTCTGTAGGAAATATGGTAAGTGCAAGCAATATTGGAAGA AATATAGGCACTGGTGGTTTGTCCGTGCCAAGTATTGCATCACGAATCAATTTGAATGGT AGTGGTGGGAGTGGTAGTCTGAATGTGCAAGGATCCAGTCGAATGATGAATGGATTGCTT CATCAACAAGCAACTCCTCAGTTGATAAATATGCTTGGAAGTTCATATCCAACATCTGGA GGTTCATTATCACAGAGCCAAATTCAAGCAGGAAATAATTCTTTTAGTTCTATGGGGATG TTGCATGATGCCAGTGACACTGCTCCATTTGACATAAATGATTTTCCCCAATTGTCTGGT CGACCTAGTTCTGCTGGTGGTCCGCAAGGACAATATGGATCACTGCGCAAGCAAGGAGTT GGTGTTAATACCCTTGTGCAACAAAACCAGGAATTCAGCATTCAAAATGAAGACTTCCCG GCTTTGCCTGGATATAAAGGTAACCCTTCGGATTATAATGCTATAGAGTTGCATCACAAG GAACAACTCCACGATAATGTACCTGTAATTCAAGCACAGCAGTATCCTATGGCAAGGTCA GGCTTAGGAAGTAGCTACCTACCCAATCGACAACAACACCAGCAAGGTGCTAATTCAGTC CAGAATGGCGGATCCCACAATATTTTACTGAGACCACCCAGTCAAACTTCTAGTTTGGGA TCATATGATCCATTTCTGCAGCAATACCAGCAGCCTCAGCCTCAAAATCATTTCAGATTG CAGCAGATGTCTTCAGCTGCACATTCATATCGGGATCAGATTCAAAAGATTCAGGCGGGA CCGACACCACCTGATCCATATGGCTTGTTAGGATTTTTGGGTGTTATAAGGATGAATGAT GCTGATTTAGCATCTCTTGCTTTAGGAATAGATTTGACAGCATTGGGTTTGAACTTGAAC TCGCCAGATAATCTATACAAGACATTTGGCTCACCCTGGTCGAATGACCCAGCAAAAGGA GATACTGATTTTCGAATTCCAGCTTGTTACCTCTTTGACAAAACTCCTCCACTACAGACC TTACTTTTTCAGAGGTTTCACATAGTAACACTATTTTTCGTCTTCTATAGCATGCCAAAA GATGAAGCTCAGCTGTACTCTGCCAATGAACTGTGA

Peptide Sequence

PEP ID	Zm00001d052098_P013
PEP Infomation	pep chromosome:B73_RefGen_v4:4:179503911:179530514:1 gene:Zm00001d052098 transcript:Zm00001d052098_T013 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable NOT transcription complex subunit VIP2
Sequence	MPQIPHAHSGVSGRGMNFGAGPAFSSSMNIGGNIQGLSSGLGSGGNRNSVHGMPVSSSIG NSGQRISSVGNMVSASNIGRNIGTGGLSVPSIASRINLNGSGGSGSLNVQGSSRMMNGLL HQQATPQLINMLGSSYPTSGGSLSQSQIQAGNNSFSSMGMLHDASDTAPFDINDFPQLSG RPSSAGGPQGQYGSLRKQGVGVNTLVQQNQEFSIQNEDFPALPGYKGNPSDYNAIELHHK EQLHDNVPVIQAQQYPMARSGLGSSYLPNRQQHQQGANSVQNGGSHNILLRPPSQTSSLG SYDPFLQQYQQPQPQNHFRLQQMSSAAHSYRDQIQKIQAGPTPPDPYGLLGFLGVIRMND ADLASLALGIDLTALGLNLNSPDNLYKTFGSPWSNDPAKGDTDFRIPACYLFDKTPPLQT LLFQRFHIVTLFFVFYSMPKDEAQLYSANEL

Transcript Sequence

Transcript ID	Zm00001d052098_T013
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:179503911:179530514:1 gene:Zm00001d052098 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable NOT transcription complex subunit VIP2
Sequence	AACAACCTGGAGGTAGCATTCCTGGGAGATTCCCTTCAAACAACCTTCCAGTTGGCATGC CTCAGATTCCTCATGCACATTCAGGTGTCAGTGGTAGAGGGATGAATTTTGGCGCAGGTC CGGCATTTAGTAGCAGCATGAATATTGGTGGTAACATCCAAGGCTTATCCTCGGGCTTGG GCTCCGGTGGTAATCGCAATTCTGTTCATGGGATGCCAGTATCTTCATCTATAGGAAACT CGGGTCAACGGATAAGTTCTGTAGGAAATATGGTAAGTGCAAGCAATATTGGAAGAAATA TAGGCACTGGTGGTTTGTCCGTGCCAAGTATTGCATCACGAATCAATTTGAATGGTAGTG GTGGGAGTGGTAGTCTGAATGTGCAAGGATCCAGTCGAATGATGAATGGATTGCTTCATC AACAAGCAACTCCTCAGTTGATAAATATGCTTGGAAGTTCATATCCAACATCTGGAGGTT CATTATCACAGAGCCAAATTCAAGCAGGAAATAATTCTTTTAGTTCTATGGGGATGTTGC ATGATGCCAGTGACACTGCTCCATTTGACATAAATGATTTTCCCCAATTGTCTGGTCGAC CTAGTTCTGCTGGTGGTCCGCAAGGACAATATGGATCACTGCGCAAGCAAGGAGTTGGTG TTAATACCCTTGTGCAACAAAACCAGGAATTCAGCATTCAAAATGAAGACTTCCCGGCTT TGCCTGGATATAAAGGTAACCCTTCGGATTATAATGCTATAGAGTTGCATCACAAGGAAC AACTCCACGATAATGTACCTGTAATTCAAGCACAGCAGTATCCTATGGCAAGGTCAGGCT TAGGAAGTAGCTACCTACCCAATCGACAACAACACCAGCAAGGTGCTAATTCAGTCCAGA ATGGCGGATCCCACAATATTTTACTGAGACCACCCAGTCAAACTTCTAGTTTGGGATCAT ATGATCCATTTCTGCAGCAATACCAGCAGCCTCAGCCTCAAAATCATTTCAGATTGCAGC AGATGTCTTCAGCTGCACATTCATATCGGGATCAGATTCAAAAGATTCAGGCGGGACCGA CACCACCTGATCCATATGGCTTGTTAGGATTTTTGGGTGTTATAAGGATGAATGATGCTG ATTTAGCATCTCTTGCTTTAGGAATAGATTTGACAGCATTGGGTTTGAACTTGAACTCGC CAGATAATCTATACAAGACATTTGGCTCACCCTGGTCGAATGACCCAGCAAAAGGAGATA CTGATTTTCGAATTCCAGCTTGTTACCTCTTTGACAAAACTCCTCCACTACAGACCTTAC TTTTTCAGAGGTTTCACATAGTAACACTATTTTTCGTCTTCTATAGCATGCCAAAAGATG AAGCTCAGCTGTACTCTGCCAATGAACTGTGAGTACATAGAGGCCATTTCTTCAGCATAT CTTGGTGCTATATTTATCTAAATTCTCATGTTCCTTGCCTTTAATGTTTCTGGACTTTTT GTTAGTACTTTATTAAGTGTTACGACCATATATCAGTAATTTCCTTGGCAATGATTAATA TCTTTGTTAATGCTGTGAAACTTGTTCATAAACCAGCTGCCAGCCTGATGACGGGTTAAT GATGCAAGTTTCTACTTATTAGAAGCAAATGTTACCTTCATTTATGGACCTAATTCAGTG AACGTTGAACAAACTGAGCTTCTGTGTTATATAATTTGGCAGTTTTTCTGTTTTTTAAGA ATTATGTAACTTCTACACATTAGAAACCTATGAACGAATTGTTGTTTGGGTCAGTAAAGC CTTGAACCGCTGCTAGACTACCTGATCACAAGTGTTTTTAAATTTACTCTTTACATCCTA TTTTAGTTAGTGAATTTTCAGTCCATTATTCCTTTACAATATTCGTTTGTTAGTAGTTTG CTAACTTTGATGAGTGTTGTGTTGCATTGCTGCACATCCCTTGTGTTTTCATCTAGGCTT AGCCATTTTCAAGATATTGATATGGATTCTCTTTCATTCTGTCTACTATTGAATGGCAAC GGTAGTATCTAATTATATTAGTCAAAAGCTACCTTTTCCAATCTTCCACACCCGATTACT CGACAACCTAGTGTAGCACAACTAAATCAGATTAAACTGGTTTTTTTCTTTATTTATATG CCTTGTGTAGTGGTGAGAGTTGTCTCACTGAGTCACCAGTTCATGGGTTCGAACCAGCCT CTCTACATTTGCACGGGAAGGCTTGCCTCTGTTATCTCTTCACCAGACCTCAGTAAGACC TTGTTTGGATACTCTCGTATTTACCTCAATCCACATGTATTGAAGTGGATTGGGGTATAG ATTAGTTTAAGTTCCAGTCCAATCCACCTCAATACATGTGGATTGAGGTGAATAAGAGAG TATGCAAACAAGGCCTAATGTGGAAACCTCTAGCGCTGAGTCTGCCCCTTTTTTATATTA ATGTTAATATACCATACAATATATTTGTATTTTGTCTTAGGTATAATCGGGGATGGTTTT ACCATAAAGAAGTGCACTTATGGCTCACCAGAATTTCAAATGTGGAACCTCTAGTAAAAA CTCACCTCTATGAACGTGGATCTTACTATTGCTTTGACCCAGAATCCTGGGACACAATAC GCAAGGACAACTTTGTTCTCCACTATGAGATGGTAGAGAAAAGGCCAGTTCTGCCTTCAA CATCACCAAACCTTAGATGAAAAGAAAATCTAGGACGGGGAGAGGAACAAAGAAACATAT AACGATCTGCAGGAAGGACTAAGGAGGCAGGAAGTCGCAGAACAGAATTGGGGATGTCCA ATTAACACCCCTTGTAATTACTAAAACTGTGAGCGAATGTTGCGTTTTTCTTGCACTCCC CCCTTCGCCCTCCTAATTAAACTGCCTAATGTTCAGGATTAGTTTTTCTCCAGCTTCAAA ATAACAACGCATAGATGGTTTTGATGTTCTGTCCTCTGTCCAACCATATCATGTCGATGC TCAGCGAAAGATAAAAT