Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d052057_T014
CDS Infomation	cds chromosome:B73_RefGen_v4:4:177962753:177966908:-1 gene:Zm00001d052057 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase XBAT32
Sequence	ATGGGGTTCCTCAGCCTTGTGGGCAACTCCTTTGGGTGCTCTGCTTCCGGTGAGCGTCTT GTCTCAGCTGCCCGCGACGGCGACCTGCAGGAGGCACGCGCACTCCTCCAATACAACCCT CGCCTTGCCCGGTACTCCACGTTCGGCGGCCGGAACTCACCGCTGCACTATGCCGCGGCG CAAGGCCACCATGAGATTGTCTCTCTGTTGCTTGAATCCGGTGTTGAGATCAACCTTAGG AATTACAGGGGGCAGACTGCTTTGATGCAAGCATGCCAATATGGCCACTGGGAGGTTGTT CAGACACTGATACTCTTCAATGCAAATGTGCACAGGACAGATTATCTGAACGGTGGAACT GCTCTCCATTTTGCTGCACTGCATGGTCATGCCCGATGCCTCCGTCTTGTGCTTGCAGAT TATGTTCCAAGCGTACCGAATTTCTGCACCCTGGTGAATCATAAGTCATCTGAAGAAGAT TCAACTGCTGATTTTGATCATGATGCTTTGGTCAAGATGGTGAATCAGAAGGCGGATGGA GGCTTAACCCCACTTCATATGGCAGCATTAAACGGGCATGTAGAGTGCGTGCAATTGTTG CTGGACTTAGGGGCATCTGTTTCTGAGGTCACTATTGAGGATGGAACAACTATAGACTTA ATAGGGGCCGGTAGCACCCCACTTCACTATGCTGCTTGTGGTGGAAATGCTGTCTGTTGT CAGCTCCTAATTGCTCGAGGGGCTTGCATTGCTGTGCAAAATGCTAGCGGATGGACCCCT TTAATGGTGGCTCGTTCCTGGCAAAGAAATTCAGTTGAAGAAATCTTAAGTAGAGAACCA GAGGGTCGGATACACACTCTTCCTTCACCTTATCTCTGTCTTCCACTCATGAGTATCATG AACATTGCCAGGGAGTGTGGATGGAGGTATCTAAACCAGTCACCTGTTTGTATCGACCCT TGTGCTGTCTGCTTAGAAGGGAGCTGTTCCGTTGCTGCAGAAGGTTGCAAACATGAATTC TGCACAAGATGTGCTCTATACCTTTGCTCAACTAGCTACACGTCAGCGAGCCCAGCGGGT GCAATACCATGCCCTCTCTGCAGACATCCGATCATCTCGTTCAACACCCTCCCCGGCACG AGCCCGATAAGAGAGTTGCCGAGGAACAGCCTCTCGCTGTCGTTCTGCACGGCGTGCCCA GCCGTGAGCTCCGACTCTTCCGCCCCGGTCGGCGCCCATCCGTGCCGCTCCGAGTTCCAG TGCGTCCGCCTGCCGCCGATGGGCTCGTCCTCCTTCCGCTCGCTGAGCTGCCAGAGGATA CCAGCGATGAAGCTGCACCCATCGTTCTGCATGGGTTCCATGGACACGAACCCCTGCCTC ATAAGGTGCTCGAGGTTCGGGTCTGGCCTTGGGCGGTCGGCTTCCCAGAGAGAGGGGGCT ACCAGAAGAGCTTGGCCTGTGACGTTCAGCCCCATTGCTGCCACCGGCAGCTGA

Peptide Sequence

PEP ID	Zm00001d052057_P014
PEP Infomation	pep chromosome:B73_RefGen_v4:4:177962753:177966908:-1 gene:Zm00001d052057 transcript:Zm00001d052057_T014 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase XBAT32
Sequence	MGFLSLVGNSFGCSASGERLVSAARDGDLQEARALLQYNPRLARYSTFGGRNSPLHYAAA QGHHEIVSLLLESGVEINLRNYRGQTALMQACQYGHWEVVQTLILFNANVHRTDYLNGGT ALHFAALHGHARCLRLVLADYVPSVPNFCTLVNHKSSEEDSTADFDHDALVKMVNQKADG GLTPLHMAALNGHVECVQLLLDLGASVSEVTIEDGTTIDLIGAGSTPLHYAACGGNAVCC QLLIARGACIAVQNASGWTPLMVARSWQRNSVEEILSREPEGRIHTLPSPYLCLPLMSIM NIARECGWRYLNQSPVCIDPCAVCLEGSCSVAAEGCKHEFCTRCALYLCSTSYTSASPAG AIPCPLCRHPIISFNTLPGTSPIRELPRNSLSLSFCTACPAVSSDSSAPVGAHPCRSEFQ CVRLPPMGSSSFRSLSCQRIPAMKLHPSFCMGSMDTNPCLIRCSRFGSGLGRSASQREGA TRRAWPVTFSPIAATGS

Transcript Sequence

Transcript ID	Zm00001d052057_T014
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:177962753:177966908:-1 gene:Zm00001d052057 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase XBAT32
Sequence	GCATCGCGTCCTTGGTTCCTCGCATTAGCCACCCACTGGATTTTCTTGCCAACGAGCTTC GACTACACCAACGCCGCTTCGTCCCAGTGCTTGCTAATCATCGGCTCCTCTTAATTGCAG CAACCACCACGCTTCGTGTTTTCAGATCAAAGAAGTGGGGGAACAACACAGATTTGGAGC GGCACGCCAGCAATACGGACCGGGGGTGACCTGAGGCGTGGAGATTTTTGGCCGCTGCCT GCATCTCCACGTCGCGGTCCCAATCAAGATCATTATTTCTTTCTCCTTCCTTGTCCCCGC CCAAATCGCAAGGCTTCGTTGCGAATCGCCCTTGGCGTGGCCCCAGGATTCGACGCCCCA GCGCCCTCGCTGGAATCGTGGGCGCTGTGGAGGAGGACTCGAGGCGGCCGTCGCGCTTGT CTCGTCTCTCATCAATCTCACTCTCTCTCTGGTCTCTCTCTTTTTTTAACTGCGGGGATT CGCCCTGATTTAGAGGAGCGAGTTGCTGGTCTCGGCGCCGTCTAGCTCGTCCCGGACCGA CGATTTGGGGCAGGGCAGGTCCAAAGCATGCCTCAGTTGGGCCTGTCTCGTGATCTTCCT GTAATGCGGTTTGCGGCAGGCAGCAGCATCATGGAAGATTGAGAAAATTTGGAGGCATCT ACTACAAGGTTTTCCTGTGTGCCCTCAAGACAGGGCGCTGTGCCGTGTGGGCCTCCTCTT GGGCATCCATGGGGTTCCTCAGCCTTGTGGGCAACTCCTTTGGGTGCTCTGCTTCCGGTG AGCGTCTTGTCTCAGCTGCCCGCGACGGCGACCTGCAGGAGGCACGCGCACTCCTCCAAT ACAACCCTCGCCTTGCCCGGTACTCCACGTTCGGCGGCCGGAACTCACCGCTGCACTATG CCGCGGCGCAAGGCCACCATGAGATTGTCTCTCTGTTGCTTGAATCCGGTGTTGAGATCA ACCTTAGGAATTACAGGGGGCAGACTGCTTTGATGCAAGCATGCCAATATGGCCACTGGG AGGTTGTTCAGACACTGATACTCTTCAATGCAAATGTGCACAGGACAGATTATCTGAACG GTGGAACTGCTCTCCATTTTGCTGCACTGCATGGTCATGCCCGATGCCTCCGTCTTGTGC TTGCAGATTATGTTCCAAGCGTACCGAATTTCTGCACCCTGGTGAATCATAAGTCATCTG AAGAAGATTCAACTGCTGATTTTGATCATGATGCTTTGGTCAAGATGGTGAATCAGAAGG CGGATGGAGGCTTAACCCCACTTCATATGGCAGCATTAAACGGGCATGTAGAGTGCGTGC AATTGTTGCTGGACTTAGGGGCATCTGTTTCTGAGGTCACTATTGAGGATGGAACAACTA TAGACTTAATAGGGGCCGGTAGCACCCCACTTCACTATGCTGCTTGTGGTGGAAATGCTG TCTGTTGTCAGCTCCTAATTGCTCGAGGGGCTTGCATTGCTGTGCAAAATGCTAGCGGAT GGACCCCTTTAATGGTGGCTCGTTCCTGGCAAAGAAATTCAGTTGAAGAAATCTTAAGTA GAGAACCAGAGGGTCGGATACACACTCTTCCTTCACCTTATCTCTGTCTTCCACTCATGA GTATCATGAACATTGCCAGGGAGTGTGGATGGAGGTATCTAAACCAGTCACCTGTTTGTA TCGACCCTTGTGCTGTCTGCTTAGAAGGGAGCTGTTCCGTTGCTGCAGAAGGTTGCAAAC ATGAATTCTGCACAAGATGTGCTCTATACCTTTGCTCAACTAGCTACACGTCAGCGAGCC CAGCGGGTGCAATACCATGCCCTCTCTGCAGACATCCGATCATCTCGTTCAACACCCTCC CCGGCACGAGCCCGATAAGAGAGTTGCCGAGGAACAGCCTCTCGCTGTCGTTCTGCACGG CGTGCCCAGCCGTGAGCTCCGACTCTTCCGCCCCGGTCGGCGCCCATCCGTGCCGCTCCG AGTTCCAGTGCGTCCGCCTGCCGCCGATGGGCTCGTCCTCCTTCCGCTCGCTGAGCTGCC AGAGGATACCAGCGATGAAGCTGCACCCATCGTTCTGCATGGGTTCCATGGACACGAACC CCTGCCTCATAAGGTGCTCGAGGTTCGGGTCTGGCCTTGGGCGGTCGGCTTCCCAGAGAG AGGGGGCTACCAGAAGAGCTTGGCCTGTGACGTTCAGCCCCATTGCTGCCACCGGCAGCT GAATTGGCGGTTTTGTGCCCCCCGTTTTTTTGAGGTCGGGTTTTGTTTGCCAATTTTTTG GTTGGTTTGATCTAATGTTCACCGTTGTGATCGATATGGTATGAACTCGCTGGTTCCAAC TCCTTGTTGATTCGGAGTACTTATATATGTCTGATCAGAAGCAGCACGTAACTGCTTACT ACCTTGGTAT