Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d052035_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:177034088:177035560:-1 gene:Zm00001d052035 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA polymerase II C-terminal domain phosphatase-like 4
Sequence	ATGGAGCAAAAGCAAGGAGGAAAAAACGACGACACCCCGCTCTGCCCCCCACATCTTGGG TTCATCGGCGGGCTCTGCTTCCTTTGCGGGGCGAAGGAGGAGGACGCGGAAGGAGGTACT CCCAGAGTCGCCGTTGGTCAAGGAGTAGAAGGAAGCGACAGCAGCGATGATGACGCGCGC TGCGTGGAGGCGAAAACGGAAGGATGTGCTCCCGGAGTCTCCGTTGGGCACAGAATGAAG GTGGAAGAAGGCGACGACGACGCGCTCTTTCCCCTGGACCCCGAGTTCGCCCTGGCTGAA CTCTACTACCAGTGCGGGTTGCCGGGGAAGATGATGGAGGAGGAGGACGCGGAGGGAAGC GCATCAGGAGTCACGGTAGCGAACATTGACGGGGGGCTGGTGAGGCCAGCTTTGGCGGCG GCGATGAGCATCGCGAGCGCGTCCGACATGGCGACCCTCATGCGCGAGAGGAAGTTGATC CTCGTCCTGGACCTGGACAGCACGCTGGTCAACTCGGCGAGGCTCTGCGACTTCTCAGCA CAGGAGAAACGCAACGGGTTCACGCGCTACACCGGGGACAAGCCCCACATGGACCTCTTC CGGCTGAAGTACTCCAACAAAGCTCGCAAGCTCACCAAGCTGCGGCCGTTCGTGCGAGGC TTCCTGGAGCAGGCGAGCTCCATGTTCGAGATGCACGTGTACACCTTGGCAAAACGGGCC TACGCGAAGGCGGTCATCGACCTTCTGGACCCGAACGGCGTCTACTTCGGCGGCAGGGTC GTGTCCAGAAAGGACTCGACGCGGCGGGATATGAAGAGCCTCGACGTCATCCCGGGTGCC GACCCCGTCGCGGTGGTGATCCTCGACGACACGGACGTCTGGCCGGCGCACCAGGACAAC CTCATCCTCATGGACAGATACCACTACTTCGCCTCCACCTGTCGCAAGTTCCGCTACGAC ATCCCCTCCCTGGCGGAGCAGGGCCGGGACGAGAGGGAGCAGGACAACTCGCTGGCCGTG GTGCTGAACGTGCTGAGGCGCATCCACCAGGACTTCTTCGACGGCGACCAAGCGGACGTC AGGGAGGTGATCAGGGAGGTGCGGCGACAGGTGCTGCCCGAGTGCACGATTGCGTTCAGC TATCTGGATGATTGTATGGAGGACTTCCCCGAGAACACCCTCATGTGGACGTTGGCCGAG CGGCTCGGCGCCGTGTGCAGGAAAGACGTCGACGAGACGGTCACCCATGTCGTTGCGGAG GATCCGGGGACCCAGAAGGCGCAGTGGGCGCGGGACCACGGCAAGTTTCTCGTCAACCCA GAGTGGATCAAGGCGTCGGGTTTCCGGTGGTGCCGGGTAGACGAGCAAGGGTTCCCGGTG ACCGCCGGCCCGTGCGAGTTGAACATTGTCAGCCTACAGCTGGCGGTACGTAATGGCATT GTCAGCCTTCGTGCTGCAGATTGTCCATGCTAA

Peptide Sequence

PEP ID	Zm00001d052035_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:177034088:177035560:-1 gene:Zm00001d052035 transcript:Zm00001d052035_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA polymerase II C-terminal domain phosphatase-like 4
Sequence	MEQKQGGKNDDTPLCPPHLGFIGGLCFLCGAKEEDAEGGTPRVAVGQGVEGSDSSDDDAR CVEAKTEGCAPGVSVGHRMKVEEGDDDALFPLDPEFALAELYYQCGLPGKMMEEEDAEGS ASGVTVANIDGGLVRPALAAAMSIASASDMATLMRERKLILVLDLDSTLVNSARLCDFSA QEKRNGFTRYTGDKPHMDLFRLKYSNKARKLTKLRPFVRGFLEQASSMFEMHVYTLAKRA YAKAVIDLLDPNGVYFGGRVVSRKDSTRRDMKSLDVIPGADPVAVVILDDTDVWPAHQDN LILMDRYHYFASTCRKFRYDIPSLAEQGRDEREQDNSLAVVLNVLRRIHQDFFDGDQADV REVIREVRRQVLPECTIAFSYLDDCMEDFPENTLMWTLAERLGAVCRKDVDETVTHVVAE DPGTQKAQWARDHGKFLVNPEWIKASGFRWCRVDEQGFPVTAGPCELNIVSLQLAVRNGI VSLRAADCPC

Transcript Sequence

Transcript ID	Zm00001d052035_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:177034088:177035560:-1 gene:Zm00001d052035 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA polymerase II C-terminal domain phosphatase-like 4
Sequence	ATGGAGCAAAAGCAAGGAGGAAAAAACGACGACACCCCGCTCTGCCCCCCACATCTTGGG TTCATCGGCGGGCTCTGCTTCCTTTGCGGGGCGAAGGAGGAGGACGCGGAAGGAGGTACT CCCAGAGTCGCCGTTGGTCAAGGAGTAGAAGGAAGCGACAGCAGCGATGATGACGCGCGC TGCGTGGAGGCGAAAACGGAAGGATGTGCTCCCGGAGTCTCCGTTGGGCACAGAATGAAG GTGGAAGAAGGCGACGACGACGCGCTCTTTCCCCTGGACCCCGAGTTCGCCCTGGCTGAA CTCTACTACCAGTGCGGGTTGCCGGGGAAGATGATGGAGGAGGAGGACGCGGAGGGAAGC GCATCAGGAGTCACGGTAGCGAACATTGACGGGGGGCTGGTGAGGCCAGCTTTGGCGGCG GCGATGAGCATCGCGAGCGCGTCCGACATGGCGACCCTCATGCGCGAGAGGAAGTTGATC CTCGTCCTGGACCTGGACAGCACGCTGGTCAACTCGGCGAGGCTCTGCGACTTCTCAGCA CAGGAGAAACGCAACGGGTTCACGCGCTACACCGGGGACAAGCCCCACATGGACCTCTTC CGGCTGAAGTACTCCAACAAAGCTCGCAAGCTCACCAAGCTGCGGCCGTTCGTGCGAGGC TTCCTGGAGCAGGCGAGCTCCATGTTCGAGATGCACGTGTACACCTTGGCAAAACGGGCC TACGCGAAGGCGGTCATCGACCTTCTGGACCCGAACGGCGTCTACTTCGGCGGCAGGGTC GTGTCCAGAAAGGACTCGACGCGGCGGGATATGAAGAGCCTCGACGTCATCCCGGGTGCC GACCCCGTCGCGGTGGTGATCCTCGACGACACGGACGTCTGGCCGGCGCACCAGGACAAC CTCATCCTCATGGACAGATACCACTACTTCGCCTCCACCTGTCGCAAGTTCCGCTACGAC ATCCCCTCCCTGGCGGAGCAGGGCCGGGACGAGAGGGAGCAGGACAACTCGCTGGCCGTG GTGCTGAACGTGCTGAGGCGCATCCACCAGGACTTCTTCGACGGCGACCAAGCGGACGTC AGGGAGGTGATCAGGGAGGTGCGGCGACAGGTGCTGCCCGAGTGCACGATTGCGTTCAGC TATCTGGATGATTGTATGGAGGACTTCCCCGAGAACACCCTCATGTGGACGTTGGCCGAG CGGCTCGGCGCCGTGTGCAGGAAAGACGTCGACGAGACGGTCACCCATGTCGTTGCGGAG GATCCGGGGACCCAGAAGGCGCAGTGGGCGCGGGACCACGGCAAGTTTCTCGTCAACCCA GAGTGGATCAAGGCGTCGGGTTTCCGGTGGTGCCGGGTAGACGAGCAAGGGTTCCCGGTG ACCGCCGGCCCGTGCGAGTTGAACATTGTCAGCCTACAGCTGGCGGTACGTAATGGCATT GTCAGCCTTCGTGCTGCAGATTGTCCATGCTAA