Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d052031_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:4:176948157:176949020:-1 gene:Zm00001d052031 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable CCR4-associated factor 1 homolog 11
Sequence

ATGGCAATGCCAGATCTCACAGCCACCGTGATCCCAAAGCTAGGCGAGGCCGACGACGAG
TCGGTGGAGATCCGGGAGGTGTGGGCCGACAACATGGAGGAGGAGTTCGCGCTGATCCGC
GACATCGTCGACGAGTACCCATTCGTCGCGATGGACACGGAGTTCCCGGGCATCGTCTGC
CGGCCCGTTGGCGCCTTCCGCTCTCCCGCCGACTACAACTACGCCACCCTCAAGGCCAAC
GTGGACATGCTGCACCTCATCCAGCTCGGCCTTACCTTCTCCGGGCCGCGCGGCGAGCTA
CCGGTCCTCGGTGCTGGCCGCCGCCGCTGCGTCTGGCAGTTCAACTTCCGCGAGTTCGAC
GACGCGCGCGACATCTTCGCGTCCGACTCCATCGAGCTGCTCCGTCGCAGCGGCATCGAC
CTCCGCCTCAACGCCGAGCGCGGGGTCGATGCTCGCCGCTTCGCCGAGCTCCTCATGTCT
TCCGGCGTCGTGCTCAATGACTCCGTATACTGGGTTACCTTCCACGCAGGATACGACTTC
GGGTACCTACTGAAGATCCTCACTTGCAATTGCCTCCCAGACACACAAGCCGGGTTCTTT
AAACTTATGAAGATATATTTCCCGACTGTGTATGACATCAAGCATCTCATGAAGTTCTGC
AACAGCCTGCACGGTGGACTGAACAAGCTTGCTGAGCTACTTGATGTGGAGCGTGTTGGG
GAGTCCCATCAAGCTGGGTCCGATAGCTTGGTCACGTCCTGTGCATTCTGGAAGCTCAAG
GATTCATTCTTCACGGGCTCAACAGAGAAATATGCAGGTGTGCTGTATGGGCTTAATGCA
GAGATTGATGTTAGTGCACATTGA

Peptide Sequence

PEP ID

Zm00001d052031_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:4:176948157:176949020:-1 gene:Zm00001d052031 transcript:Zm00001d052031_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable CCR4-associated factor 1 homolog 11
Sequence

MAMPDLTATVIPKLGEADDESVEIREVWADNMEEEFALIRDIVDEYPFVAMDTEFPGIVC
RPVGAFRSPADYNYATLKANVDMLHLIQLGLTFSGPRGELPVLGAGRRRCVWQFNFREFD
DARDIFASDSIELLRRSGIDLRLNAERGVDARRFAELLMSSGVVLNDSVYWVTFHAGYDF
GYLLKILTCNCLPDTQAGFFKLMKIYFPTVYDIKHLMKFCNSLHGGLNKLAELLDVERVG
ESHQAGSDSLVTSCAFWKLKDSFFTGSTEKYAGVLYGLNAEIDVSAH

Transcript Sequence

Transcript ID

Zm00001d052031_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:176948157:176949020:-1 gene:Zm00001d052031 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable CCR4-associated factor 1 homolog 11
Sequence

ATGGCAATGCCAGATCTCACAGCCACCGTGATCCCAAAGCTAGGCGAGGCCGACGACGAG
TCGGTGGAGATCCGGGAGGTGTGGGCCGACAACATGGAGGAGGAGTTCGCGCTGATCCGC
GACATCGTCGACGAGTACCCATTCGTCGCGATGGACACGGAGTTCCCGGGCATCGTCTGC
CGGCCCGTTGGCGCCTTCCGCTCTCCCGCCGACTACAACTACGCCACCCTCAAGGCCAAC
GTGGACATGCTGCACCTCATCCAGCTCGGCCTTACCTTCTCCGGGCCGCGCGGCGAGCTA
CCGGTCCTCGGTGCTGGCCGCCGCCGCTGCGTCTGGCAGTTCAACTTCCGCGAGTTCGAC
GACGCGCGCGACATCTTCGCGTCCGACTCCATCGAGCTGCTCCGTCGCAGCGGCATCGAC
CTCCGCCTCAACGCCGAGCGCGGGGTCGATGCTCGCCGCTTCGCCGAGCTCCTCATGTCT
TCCGGCGTCGTGCTCAATGACTCCGTATACTGGGTTACCTTCCACGCAGGATACGACTTC
GGGTACCTACTGAAGATCCTCACTTGCAATTGCCTCCCAGACACACAAGCCGGGTTCTTT
AAACTTATGAAGATATATTTCCCGACTGTGTATGACATCAAGCATCTCATGAAGTTCTGC
AACAGCCTGCACGGTGGACTGAACAAGCTTGCTGAGCTACTTGATGTGGAGCGTGTTGGG
GAGTCCCATCAAGCTGGGTCCGATAGCTTGGTCACGTCCTGTGCATTCTGGAAGCTCAAG
GATTCATTCTTCACGGGCTCAACAGAGAAATATGCAGGTGTGCTGTATGGGCTTAATGCA
GAGATTGATGTTAGTGCACATTGA