Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d051998_T016
CDS Infomation	cds chromosome:B73_RefGen_v4:4:176207289:176221199:1 gene:Zm00001d051998 gene_biotype:protein_coding transcript_biotype:protein_coding description:AP-1 complex subunit gamma-1
Sequence	ATGGACACGGTCGAGAAGATCGTCGAGGACTTCGCCTCGGACATCGCCGTGAGCCCCTTC TCCTCCGGGACGAGCCTCCGGGAGATGATACGCGCGATACGCGCGTGCAAGACGGCGGCG GAGGAGCGCGCGGTGGTGCGGCGGGAATGTGCGGCGATACGCACGGCCATCAGCGAGAAT GAGCCGGAGCTCCGGCACAGGAACATGGCCAAGCTCATGTTCATCCACATGCTGGGCTAC CCCACCCATTTCGCGCAGATGGAGTGCCTCAAGCTCATCGCGGCCGCGGGATTCCCGGAG AAGCGGGTGGGCTACCTCGGCCTCATGCTGCTCCTTGACGAGCGGCAGGAGGTGCTCATG CTCGTCACCAACTCCCTCAAACAAGATCTCAACCACACGAACCAGTTCATCGTGGGCCTT GCATTGTGTGCTCTTGGGAACATCTGCTCTGCTGAAATGGCGCGGGATCTTTCACCTGAA GTGGAGAGGTTGATGCGCAGTAGGGAAGTCAATACAAAGAAAAAGGCTGCTTTGTGCTCT ATAAGGATTGTCAGGAAAGTGCCAGATTTGGCAGAGAACTTCATGGGCCTGGCTGCATCA TTGTTGAAGGAGAAACACCATGGGGTCCTCATATCTGCAATTCAGCTCTGCACAGAACTA TGCAAAGCAAGCAAAGATTCTCTAGAGTACCTGAGGAAGAACTGCATCGAAGGTTTGGCT CGCATACTGAGAGATGTGTCCAATAGGTCATATGCTCCGGAGTATGATGTTTCTGGCATT GTTGATCCATTCTTGCATATTCGAGTCCTTAAACTTTTGCGGATCTTGGGTCAAGGAGAT GCAGATTGCAGTGAATATATGAATGATATTCTTGCTCAGGTTGCAACAAAAACTGAGTCC AACAAGAATGCTGGAAACGCCATTCTGTATGAATGTGTTCAGACTATAATGGGTATTGAA GCTACTAGTGGTTTACGTGTGCTGGCAATCAATATTTTGGGTAGATTCTTGTCTAACCGT GACAACAATATAAGATATGTTGCTCTTAACATGCTTATGAGGGCCATTACAGTTGATGCA CTAGCAGTGCAGAGACACAGAACAACAATATTAGAGTGTGTAAAGGATGCCGATGCCTCC ATTCGCAAAAGGGCTCTTGAACTTGTTTATTTGTTAGTCAATGATACAAATGTAAAGCCT TTGACTAAAGAGCTCATCGATTACTTAAACATAGCGGATCCAGATTTTATAGGAGATCTC ACAGTAAATATATGCTCTATAGTTGAAAAGTTTTCTCAAGAGAAGTTATGGTACCTTGAC CAGATGTTCAATGTTTTATCTCTGGCTGGAAATCATGTGAAGGATGACATATGTCATGCC CTTATTGTTGTACTAAGTAATACATCAGAGCTTCAAGGATATTCAGTGAGGTCATTGTAT AAGGCCTTACAAGAATATGGTAAACAGTAA

Peptide Sequence

PEP ID	Zm00001d051998_P016
PEP Infomation	pep chromosome:B73_RefGen_v4:4:176207289:176221199:1 gene:Zm00001d051998 transcript:Zm00001d051998_T016 gene_biotype:protein_coding transcript_biotype:protein_coding description:AP-1 complex subunit gamma-1
Sequence	MDTVEKIVEDFASDIAVSPFSSGTSLREMIRAIRACKTAAEERAVVRRECAAIRTAISEN EPELRHRNMAKLMFIHMLGYPTHFAQMECLKLIAAAGFPEKRVGYLGLMLLLDERQEVLM LVTNSLKQDLNHTNQFIVGLALCALGNICSAEMARDLSPEVERLMRSREVNTKKKAALCS IRIVRKVPDLAENFMGLAASLLKEKHHGVLISAIQLCTELCKASKDSLEYLRKNCIEGLA RILRDVSNRSYAPEYDVSGIVDPFLHIRVLKLLRILGQGDADCSEYMNDILAQVATKTES NKNAGNAILYECVQTIMGIEATSGLRVLAINILGRFLSNRDNNIRYVALNMLMRAITVDA LAVQRHRTTILECVKDADASIRKRALELVYLLVNDTNVKPLTKELIDYLNIADPDFIGDL TVNICSIVEKFSQEKLWYLDQMFNVLSLAGNHVKDDICHALIVVLSNTSELQGYSVRSLY KALQEYGKQ

Transcript Sequence

Transcript ID	Zm00001d051998_T016
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:176207289:176221199:1 gene:Zm00001d051998 gene_biotype:protein_coding transcript_biotype:protein_coding description:AP-1 complex subunit gamma-1
Sequence	GCCTCGCCTCGCCTTCCGCTGCTTCCCGCCTCTAACCACCACGGCATCCAGATCCCGCGA CTCCACCTCCACTCGCGGCGGCGTGCCCTCGCCGAGATCTCATCATGGACACGGTCGAGA AGATCGTCGAGGACTTCGCCTCGGACATCGCCGTGAGCCCCTTCTCCTCCGGGACGAGCC TCCGGGAGATGATACGCGCGATACGCGCGTGCAAGACGGCGGCGGAGGAGCGCGCGGTGG TGCGGCGGGAATGTGCGGCGATACGCACGGCCATCAGCGAGAATGAGCCGGAGCTCCGGC ACAGGAACATGGCCAAGCTCATGTTCATCCACATGCTGGGCTACCCCACCCATTTCGCGC AGATGGAGTGCCTCAAGCTCATCGCGGCCGCGGGATTCCCGGAGAAGCGGGTGGGCTACC TCGGCCTCATGCTGCTCCTTGACGAGCGGCAGGAGGTGCTCATGCTCGTCACCAACTCCC TCAAACAAGATCTCAACCACACGAACCAGTTCATCGTGGGCCTTGCATTGTGTGCTCTTG GGAACATCTGCTCTGCTGAAATGGCGCGGGATCTTTCACCTGAAGTGGAGAGGTTGATGC GCAGTAGGGAAGTCAATACAAAGAAAAAGGCTGCTTTGTGCTCTATAAGGATTGTCAGGA AAGTGCCAGATTTGGCAGAGAACTTCATGGGCCTGGCTGCATCATTGTTGAAGGAGAAAC ACCATGGGGTCCTCATATCTGCAATTCAGCTCTGCACAGAACTATGCAAAGCAAGCAAAG ATTCTCTAGAGTACCTGAGGAAGAACTGCATCGAAGGTTTGGCTCGCATACTGAGAGATG TGTCCAATAGGTCATATGCTCCGGAGTATGATGTTTCTGGCATTGTTGATCCATTCTTGC ATATTCGAGTCCTTAAACTTTTGCGGATCTTGGGTCAAGGAGATGCAGATTGCAGTGAAT ATATGAATGATATTCTTGCTCAGGTTGCAACAAAAACTGAGTCCAACAAGAATGCTGGAA ACGCCATTCTGTATGAATGTGTTCAGACTATAATGGGTATTGAAGCTACTAGTGGTTTAC GTGTGCTGGCAATCAATATTTTGGGTAGATTCTTGTCTAACCGTGACAACAATATAAGAT ATGTTGCTCTTAACATGCTTATGAGGGCCATTACAGTTGATGCACTAGCAGTGCAGAGAC ACAGAACAACAATATTAGAGTGTGTAAAGGATGCCGATGCCTCCATTCGCAAAAGGGCTC TTGAACTTGTTTATTTGTTAGTCAATGATACAAATGTAAAGCCTTTGACTAAAGAGCTCA TCGATTACTTAAACATAGCGGATCCAGATTTTATAGGAGATCTCACAGTAAATATATGCT CTATAGTTGAAAAGTTTTCTCAAGAGAAGTTATGGTACCTTGACCAGATGTTCAATGTTT TATCTCTGGCTGGAAATCATGTGAAGGATGACATATGTCATGCCCTTATTGTTGTACTAA GTAATACATCAGAGCTTCAAGGATATTCAGTGAGGTCATTGTATAAGGCCTTACAAGAAT ATGGTAAACAGTAAGAGTAGCTGTTTGGTGCATTGGTGAATATGGTGAAATGCTGGTGAA CAATGTTGGCATGCTGGATGGGGAGGAGCCAATTAAGGTAACAGAATCAGATGCTGTGGA TGCTGTAGAGGTCGCTCTTAACCGCTACTCAGCAGATATGACAACTGGAGCAATGTGTCT GGTTGCTCTTCTGAAACTCTCCTCACGATTTCCTTTGACATCAGAGAGGATAAAACAAAT AGTTGCCCAGAATAAAGGGAATGTTGTCCTTGAACTACAGCAAAGATCAATTGAATTCAC TTCCATTATACAAAGACATCAGTCTATCAGATCGTCCTTGCTTGAACGCATGCCTGTATT AGATGAAGCTAGTTATCTGGTGAAGCGGGCTACTGCTACACAATCAACTATTTCAGCAGA TAAAATTGCTCCAACAGTCACTCCTGGAAGCCTTAAGCTTCCGAATGGTGTAGCAAAACC CACCTCAGCTCCTTTAGCTGATTTGCTTGATTTCAGTTCTGATGGTGCCCCAGCTTCCAC CGTTGCTTCTACTACAACACCTAATGATTTTTTGCAAGATCTTCTGGGTATTGGTGGAGT TAGTTCATCAACGACAGGTGTAACTTCAACCGCAAGCACAGATATTCTTATGGATCTTCT GTCCATTGGATCATCTCCATCACAGAATGGCACCCCCGTAACAGACTTCCGTCATCCTGG ACAAGAGTCTAAACCTGTTCCTGGTGTACCTGAAGCTGTTGACCTCCTCGGTAGTTTGTC ACCAGCCGAGTCTAAACCCACACCAGTTGTACCTAAGGACATGGATCTGCTCGACGGTTT GTCATCAAATACATCTATTTCTGGACATGAGAATACAACCCACCCATCAATAACAGCTTT TCAGAGTGCAACCTTGAAGATCACGTTTGATTTCAAAATGAAGCTTGGAAACCCACGAGA GACTACAATTCATGCCACTTTTACCAATTTGACATCTAGTACTTTTACAGATTTTATTTT TCAGGCTGCTGTTCCAAAGTTCATCCAATTGAGACTGGATCCGGCTAGTGGCAACACTGT TCCAGCTAATGGAAGTGGTTCAGTCACACAAGGGCTCAACATCACCAATAACCAACAGGG ACAGAAACCGCTTGCAATGCGGATCCGGATGTCTTATAAAGTGAATGGCGAGGACAGATT GGAACAAGGCCAAGTCAGCAATTTTCCTTCTGGACTATAGGCCGTTTCTGTATACTATGA CGTGTCGGGGACAGGCATATAGAACGAAGCCTTGTTTTACCCTCTACCTCATTTTTTAAT TATTCTGGGGATTTGTCGGGGTGCTTAGAGAAAATGTTTTTTCCGGCGGTTAGTTTTCCT GTACTAAGTATATTGTATATTATTCCAGCAGCGATGTGATCTTCAAATTCATCGTGATGT ATTCGACACCACGCTAAAGGATGGTCTGAGCAAACTTTCTTCAGCTCCTCAATCATTGTA AAACTAGCTTCTGTTTTTCTTG