Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d051988_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:176007409:176010373:1 gene:Zm00001d051988 gene_biotype:protein_coding transcript_biotype:protein_coding description:PAP-specific phosphatase HAL2-like
Sequence	ATGGGCAGCCTCCGCGTCGTCGGCTGGGCTTGGACCGCCGCCGCCGCGCCGGAGTGGGGC GTGCACCGCCGCTGCTGCCGCGGGACGCCGCTGGCCCGCCCCCGCGCGGCGACGTCCTCC CTTGGCGCGGGGCAGCTCCGGGTCGGGACGGAGCACGGGTGGCTCTGGGATTGCCGCGGC GGCGGCGGCGCGGGGGATTACGCCAGGGAGATGGAGGTGGCGGTGCGCGTCGTGCAGGTG GCCTGCACCCTGTGCCAGCGCGTGCAGGACTCGCTCCTCCGCCCCGGCCCCGACGCCGCC GGCGGCGACGGGCGCGTCCACGCCAAGCTCGACCGCTCCCCCGTAACCGTCGCTGATTGG GGTGTTCAAGCGATAGTAAGCTGGCTGCTTTCCAGTTCCTTTCATGATGAGGACATATCG ATCATTGCCGAAGAAGATGATGAGACACTATCTAGTAGTGACGGTGTAACTTTGCTTGAA TCTGTTGTTGAGGCTGTCAACGGCTGCCTGGTTGAAGCTCCAAACTATGGGCTGAGATCC CCTGAGAAAGAGCTCAGAGCTCATGATGTTATTCAAGCCATACGGAAATGCAGCTCTACT GGAGGCCCGAAAGGAAGATTTTGGGTGCTTGATCCTGTCGACGGCACCCTTGGGTTTGTG AGAGGGGACCAATATGCTATTGCTCTAGCCTTGATTGAAGATGGAGAAGTTATACTTGGT GTTCTTGGGTGCCCAAATTATCCAATGAAAAAGGAGTGGCTCAATTACCATCAAAAGTAC TATAGGTTGATGTCTAAGGTTGCTCCTCCTCCATTGGGGTCCTGGCATAAAGGTTGTGTG ATGTATGCCCAGAAAGGATGTGGCCAAGCTTGGATGCAACCACTGGTTCACGACTTCGGT AAGCTTAATTGGCACCACCCAAGGGAGATTCAAGTATCATCCATCAGTGATCCAATCTCA GCTACGTTCTGTGAACCAGTTGAGAAAGCTAACTCAAGCCATTCCTTCACAGCAGGACTT GCTCAAAGTGTAGGATTAAGGAATCAACCTCTGCGCGTGTACAGCATGGTGAAATATGCT GCAATAGCACGAGGCGATGCTGAAATCTTCATGAAATTTGCAAGAGCTGGATACAAAGAG AAGATATGGGATCATGCTGCAGGGGTGGTTATCATTCAGGAGGCTGGTGGAGTGGTCACA GATGCTGGTGGCCGCCCATTGGACTTCTCAAGGGGTGTTTACCTGGAAGGTCTTAGGAGA GAATGGCCTCATGTTGGTCATAGCATGGTAAATTGGAAAACTGATTTAAGTATTCATTGT GGTGCTGTTGTGACTATGGGGTAA

Peptide Sequence

PEP ID	Zm00001d051988_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:176007409:176010373:1 gene:Zm00001d051988 transcript:Zm00001d051988_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:PAP-specific phosphatase HAL2-like
Sequence	MGSLRVVGWAWTAAAAPEWGVHRRCCRGTPLARPRAATSSLGAGQLRVGTEHGWLWDCRG GGGAGDYAREMEVAVRVVQVACTLCQRVQDSLLRPGPDAAGGDGRVHAKLDRSPVTVADW GVQAIVSWLLSSSFHDEDISIIAEEDDETLSSSDGVTLLESVVEAVNGCLVEAPNYGLRS PEKELRAHDVIQAIRKCSSTGGPKGRFWVLDPVDGTLGFVRGDQYAIALALIEDGEVILG VLGCPNYPMKKEWLNYHQKYYRLMSKVAPPPLGSWHKGCVMYAQKGCGQAWMQPLVHDFG KLNWHHPREIQVSSISDPISATFCEPVEKANSSHSFTAGLAQSVGLRNQPLRVYSMVKYA AIARGDAEIFMKFARAGYKEKIWDHAAGVVIIQEAGGVVTDAGGRPLDFSRGVYLEGLRR EWPHVGHSMVNWKTDLSIHCGAVVTMG

Transcript Sequence

Transcript ID	Zm00001d051988_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:176007409:176010373:1 gene:Zm00001d051988 gene_biotype:protein_coding transcript_biotype:protein_coding description:PAP-specific phosphatase HAL2-like
Sequence	GTGGCCGTGGGCGCCGGCGGCGGCTAACAAAAGCGCCGGGAAGTGGGCACCGACCGAAGC ATCCCGGAACAGACACAGATTACCGCTTGTATTTAGATCGGCCCAGACCATCTGACGACG AGGAGGAGGGCGGGGAGGCGAGGCCAAATCCGGTCGGACTCGGACCGGCGAACTCCCCCG ACCTCGCTATGGGCAGCCTCCGCGTCGTCGGCTGGGCTTGGACCGCCGCCGCCGCGCCGG AGTGGGGCGTGCACCGCCGCTGCTGCCGCGGGACGCCGCTGGCCCGCCCCCGCGCGGCGA CGTCCTCCCTTGGCGCGGGGCAGCTCCGGGTCGGGACGGAGCACGGGTGGCTCTGGGATT GCCGCGGCGGCGGCGGCGCGGGGGATTACGCCAGGGAGATGGAGGTGGCGGTGCGCGTCG TGCAGGTGGCCTGCACCCTGTGCCAGCGCGTGCAGGACTCGCTCCTCCGCCCCGGCCCCG ACGCCGCCGGCGGCGACGGGCGCGTCCACGCCAAGCTCGACCGCTCCCCCGTAACCGTCG CTGATTGGGGTGTTCAAGCGATAGTAAGCTGGCTGCTTTCCAGTTCCTTTCATGATGAGG ACATATCGATCATTGCCGAAGAAGATGATGAGACACTATCTAGTAGTGACGGTGTAACTT TGCTTGAATCTGTTGTTGAGGCTGTCAACGGCTGCCTGGTTGAAGCTCCAAACTATGGGC TGAGATCCCCTGAGAAAGAGCTCAGAGCTCATGATGTTATTCAAGCCATACGGAAATGCA GCTCTACTGGAGGCCCGAAAGGAAGATTTTGGGTGCTTGATCCTGTCGACGGCACCCTTG GGTTTGTGAGAGGGGACCAATATGCTATTGCTCTAGCCTTGATTGAAGATGGAGAAGTTA TACTTGGTGTTCTTGGGTGCCCAAATTATCCAATGAAAAAGGAGTGGCTCAATTACCATC AAAAGTACTATAGGTTGATGTCTAAGGTTGCTCCTCCTCCATTGGGGTCCTGGCATAAAG GTTGTGTGATGTATGCCCAGAAAGGATGTGGCCAAGCTTGGATGCAACCACTGGTTCACG ACTTCGGTAAGCTTAATTGGCACCACCCAAGGGAGATTCAAGTATCATCCATCAGTGATC CAATCTCAGCTACGTTCTGTGAACCAGTTGAGAAAGCTAACTCAAGCCATTCCTTCACAG CAGGACTTGCTCAAAGTGTAGGATTAAGGAATCAACCTCTGCGCGTGTACAGCATGGTGA AATATGCTGCAATAGCACGAGGCGATGCTGAAATCTTCATGAAATTTGCAAGAGCTGGAT ACAAAGAGAAGATATGGGATCATGCTGCAGGGGTGGTTATCATTCAGGAGGCTGGTGGAG TGGTCACAGATGCTGGTGGCCGCCCATTGGACTTCTCAAGGGGTGTTTACCTGGAAGGTC TTAGGAGAGAATGGCCTCATGTTGGTCATAGCATGGTAAATTGGAAAACTGATTTAAGTA TTCATTGTGGTGCTGTTGTGACTATGGGGTAACACCGTAACAGTGCAGCATATAGGATAG TAATAGATTGTCTGCTCATATAAACAAGAAGTCGTCTCTTGAGGCTGACAAATTGCTGGC TTTTGTTCAACGATGCCATATGTAATTTTGTATAGGTGTCTGTTGATGAAAAGCATGTGT GCATGCTTTTGTTTTTACTAATTGACATGTTTCTTTTCAACTTGTGCCTGTCAATCGTCA GGTGTATTGGTTAAGACAGTGCAGCACCATTTGCTGACAATCATAATGTTAAAACCTTCA ACTGATTCATCAAATGAGTTATTGTCCGCC