Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d051980_T010
CDS Infomation

cds chromosome:B73_RefGen_v4:4:175830144:175835090:1 gene:Zm00001d051980 gene_biotype:protein_coding transcript_biotype:protein_coding description:Clathrin interactor EPSIN 2
Sequence

ATGATCATGCACATTGTGTGGAAGAGGGTCAGTGACACTGGTAAAAATTGGCGTCATGTT
TACAAGGGATTGATTGTTTTGGATTACCTGGTGGCGCATGGCACTGAACGAGTTATTGAT
GACATCAGAGAACATGCTTATCAGATATCAGCACTAGCTGATTTCCAGTACATTGATTCT
TCTGGGAGAGATCAAGGTAGCAATGTACGAAGGAAATCTCAGAGCCTTGTCAGTTTAGTT
AATGATAAAGAAAGGATACAGGAAGTTAGAGAGAAAGCACTCTCTACCAAGGACAAGTAC
AGGAGTGCGTTTGCCCCCAGTGGCAGGAGCCCAGGTGGATATGGTGGTGGTTATGATAAT
GACCGCTATGAAGGCAGCTATGGCAGTAGATATGACAACAGAAATGGAAATGGGAGGGGA
GACTATGGATACAGGGACGATGACAGATATGGTGGACCTGGAGGTACACCCAATCGGGAA
GGAGATCGTTATTCCAGAGATTCTAATGAACGCTATGGCAGAGATTATAGAGAAGATGAA
TACAAAGGAAGTCATAGCAACCATGAATATGCTGAAGGAGCAGGTCGCAGGAGCTATGGT
CAGGAAAGAGATTCATATGGGGATGGTGAAGCTTATTCATCCCGTGGTCGTGGCAGCAAT
GCTGATGATCCTACTCAGGATGATAGGCCTATAGAGCGAAAGCTTTCTAACCAGCAAATT
TCTTCACCACCACCGAACTACGAAGATGTCACAAGAGATGGCCAGGACAATCTTCACGAT
GACAGAAATGGAGGAAGTGTTCCTGCTGCTGTATCAAGGGTGCCCTCTCCTTCAGTTCCT
GCAACAACTGTTCCTGCAGTACAGGTGAATGGGGTTCATGACAGCACTGTTGAAGATGTA
CCTGCACCACCAACTGCTCATGCCGAGCCTAATGGATTTGATGAGTTTGATCCACGTGGA
TCTGTACCAGATTCTTCCCCTCCTGTAAACCCTGCATCAGTAGCGAATAGCTTGGAGATG
GATTTGTTTGGATCAGATCCTATTAGTTCGTTGGCTTTGGTGTCTGTGCCTCAACCAACG
ACTACATCAAATGTTGAAGCACCGGCAAATTCAGGTTTTGAAACAAATAGTTTTGTGGGC
ATGCCTCCTGCTTCAACTGGATTTGGCGAGATTGATGCTTCAAATCCTTTTGGGGATCCT
ACACCTTTCAAGGCAGTTCTTGATGAAAGTCCAGCACTACCTCAGACACATGCTGCACCA
GCTGGTTCTTTCCAACCCACTGGACCTGGTACGGATGTGAACCCTTTCCAGCCTGCTTCA
GCCGCAAGCTTTGGTTTTGGAGACACTCTTGGTGATCTCACTTTTGCACCAAATGCTGCA
CCTGAGCTGCAAGATATGTTTGCAAACACAGCCTCCTTGCCTTCAGAGGTAGCACCAGCA
AACCCATCTGTGGTTCTCCAACAGCCAGTTCCTACTAATTTCTCCTCTCAGGTATCTCAG
CCAGTTGCTGGCACATTGCATGCTGCTCCTACAGCATTTGCTCCTTCTCAGGCTCCTCCC
ACATCATTTGCTCATTCTCAGGCACCTCAGGCTGCCCCTGCATTTTCTTATTCACAAGGG
CCTCATCCTGGTGCTGCCATCCAGTCTCAATTTCCCCAGACTGTCGCCCCATCATTTCCT
CCTTCGCAGGTGCCTCAATCTGTAACACCCAATCTGCCACCAGGCCAATCGAACTTTTTT
TTGCAATCAGCATCAGGGTCTGGTATTGACAGCCTGTCTGGGGTTCCTACCCAGAATGGA
GCACCATCCTACATTCCCCCACAGAATTCTCAGTTCACTGCTCCGGCAAATCAACAACCA
TTGCAGCCAAGCTTCATCCCACAAACTAGCACACCAGCACTCCAGCCGGCCTTGATCTCT
AGGGGGGCATCCCAGCCCCTTGGTGTGCCAAATTCAGTGCCTACTAGTGGCAGCTTCCCG
TTGCAGTCAAGTTCATCAGCTCCCCCAGAAACAATCGTTTCTGCTTTGCAAGTCAATCAA
ACTGAGCCAGTGAAGAAGTTTGAGCCCAGATCTAAACTGTGGTCTGATACTTTGAGCCGA
GGTCTAGTCAATCTGGACATTTCTGGACCAAAAGCGAATCCTCATGCTGATATTGGAGTT
GACTTTGATTCAATCAATCGCAAGGAGAAAAGGCAGGAAAAGAAAATCAACCAAGCACCT
GTGGTGTCTACAGTCACCATGGGCAAGGCCATGGGAGCTGGTTCCGGCATTGGTCGGGCT
GGTGTAGGTGCAATGGCACCTCCTCCTAACCAAATGGGTGCCGGGAGGGGTATGGGTCCT
GGTGCCGGTGCCGGTTATGGTGGTGGAATGGGAATGAACCGGCCAATGGGCATGGGGATG
GGAATGAATCAACAACAGATGAGGATGGGGATGAACCAACAACCGATGGGAATGGGGATG
GGGATGAACCAACAACCGATGGGAGGAATGAACATGGGGATGGGGATGAACCAGGGGATG
CCGATGCGTCCTCCAATGGGGATGGGTCCTGGTGGAATGCCCGGTGCTGGCTACAATCAG
ATGGGCGCGGCGTACGGTGGCCAGCAGCCATACGGTGGATACAGGTGA

Peptide Sequence

PEP ID

Zm00001d051980_P010
PEP Infomation

pep chromosome:B73_RefGen_v4:4:175830144:175835090:1 gene:Zm00001d051980 transcript:Zm00001d051980_T010 gene_biotype:protein_coding transcript_biotype:protein_coding description:Clathrin interactor EPSIN 2
Sequence

MIMHIVWKRVSDTGKNWRHVYKGLIVLDYLVAHGTERVIDDIREHAYQISALADFQYIDS
SGRDQGSNVRRKSQSLVSLVNDKERIQEVREKALSTKDKYRSAFAPSGRSPGGYGGGYDN
DRYEGSYGSRYDNRNGNGRGDYGYRDDDRYGGPGGTPNREGDRYSRDSNERYGRDYREDE
YKGSHSNHEYAEGAGRRSYGQERDSYGDGEAYSSRGRGSNADDPTQDDRPIERKLSNQQI
SSPPPNYEDVTRDGQDNLHDDRNGGSVPAAVSRVPSPSVPATTVPAVQVNGVHDSTVEDV
PAPPTAHAEPNGFDEFDPRGSVPDSSPPVNPASVANSLEMDLFGSDPISSLALVSVPQPT
TTSNVEAPANSGFETNSFVGMPPASTGFGEIDASNPFGDPTPFKAVLDESPALPQTHAAP
AGSFQPTGPGTDVNPFQPASAASFGFGDTLGDLTFAPNAAPELQDMFANTASLPSEVAPA
NPSVVLQQPVPTNFSSQVSQPVAGTLHAAPTAFAPSQAPPTSFAHSQAPQAAPAFSYSQG
PHPGAAIQSQFPQTVAPSFPPSQVPQSVTPNLPPGQSNFFLQSASGSGIDSLSGVPTQNG
APSYIPPQNSQFTAPANQQPLQPSFIPQTSTPALQPALISRGASQPLGVPNSVPTSGSFP
LQSSSSAPPETIVSALQVNQTEPVKKFEPRSKLWSDTLSRGLVNLDISGPKANPHADIGV
DFDSINRKEKRQEKKINQAPVVSTVTMGKAMGAGSGIGRAGVGAMAPPPNQMGAGRGMGP
GAGAGYGGGMGMNRPMGMGMGMNQQQMRMGMNQQPMGMGMGMNQQPMGGMNMGMGMNQGM
PMRPPMGMGPGGMPGAGYNQMGAAYGGQQPYGGYR

Transcript Sequence

Transcript ID

Zm00001d051980_T010
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:175830144:175835090:1 gene:Zm00001d051980 gene_biotype:protein_coding transcript_biotype:protein_coding description:Clathrin interactor EPSIN 2
Sequence

GATCCTTGATGCCACAAGCAACGAGCCGTGGGGTCCACATGGATCTCTACTGGCAGACAT
TGCTCAAGCGACGAATAACTATCATGAGTACCAGATGATCATGCACATTGTGTGGAAGAG
GGTCAGTGACACTGGTAAAAATTGGCGTCATGTTTACAAGGGATTGATTGTTTTGGATTA
CCTGGTGGCGCATGGCACTGAACGAGTTATTGATGACATCAGAGAACATGCTTATCAGAT
ATCAGCACTAGCTGATTTCCAGTACATTGATTCTTCTGGGAGAGATCAAGGTAGCAATGT
ACGAAGGAAATCTCAGAGCCTTGTCAGTTTAGTTAATGATAAAGAAAGGATACAGGAAGT
TAGAGAGAAAGCACTCTCTACCAAGGACAAGTACAGGAGTGCGTTTGCCCCCAGTGGCAG
GAGCCCAGGTGGATATGGTGGTGGTTATGATAATGACCGCTATGAAGGCAGCTATGGCAG
TAGATATGACAACAGAAATGGAAATGGGAGGGGAGACTATGGATACAGGGACGATGACAG
ATATGGTGGACCTGGAGGTACACCCAATCGGGAAGGAGATCGTTATTCCAGAGATTCTAA
TGAACGCTATGGCAGAGATTATAGAGAAGATGAATACAAAGGAAGTCATAGCAACCATGA
ATATGCTGAAGGAGCAGGTCGCAGGAGCTATGGTCAGGAAAGAGATTCATATGGGGATGG
TGAAGCTTATTCATCCCGTGGTCGTGGCAGCAATGCTGATGATCCTACTCAGGATGATAG
GCCTATAGAGCGAAAGCTTTCTAACCAGCAAATTTCTTCACCACCACCGAACTACGAAGA
TGTCACAAGAGATGGCCAGGACAATCTTCACGATGACAGAAATGGAGGAAGTGTTCCTGC
TGCTGTATCAAGGGTGCCCTCTCCTTCAGTTCCTGCAACAACTGTTCCTGCAGTACAGGT
GAATGGGGTTCATGACAGCACTGTTGAAGATGTACCTGCACCACCAACTGCTCATGCCGA
GCCTAATGGATTTGATGAGTTTGATCCACGTGGATCTGTACCAGATTCTTCCCCTCCTGT
AAACCCTGCATCAGTAGCGAATAGCTTGGAGATGGATTTGTTTGGATCAGATCCTATTAG
TTCGTTGGCTTTGGTGTCTGTGCCTCAACCAACGACTACATCAAATGTTGAAGCACCGGC
AAATTCAGGTTTTGAAACAAATAGTTTTGTGGGCATGCCTCCTGCTTCAACTGGATTTGG
CGAGATTGATGCTTCAAATCCTTTTGGGGATCCTACACCTTTCAAGGCAGTTCTTGATGA
AAGTCCAGCACTACCTCAGACACATGCTGCACCAGCTGGTTCTTTCCAACCCACTGGACC
TGGTACGGATGTGAACCCTTTCCAGCCTGCTTCAGCCGCAAGCTTTGGTTTTGGAGACAC
TCTTGGTGATCTCACTTTTGCACCAAATGCTGCACCTGAGCTGCAAGATATGTTTGCAAA
CACAGCCTCCTTGCCTTCAGAGGTAGCACCAGCAAACCCATCTGTGGTTCTCCAACAGCC
AGTTCCTACTAATTTCTCCTCTCAGGTATCTCAGCCAGTTGCTGGCACATTGCATGCTGC
TCCTACAGCATTTGCTCCTTCTCAGGCTCCTCCCACATCATTTGCTCATTCTCAGGCACC
TCAGGCTGCCCCTGCATTTTCTTATTCACAAGGGCCTCATCCTGGTGCTGCCATCCAGTC
TCAATTTCCCCAGACTGTCGCCCCATCATTTCCTCCTTCGCAGGTGCCTCAATCTGTAAC
ACCCAATCTGCCACCAGGCCAATCGAACTTTTTTTTGCAATCAGCATCAGGGTCTGGTAT
TGACAGCCTGTCTGGGGTTCCTACCCAGAATGGAGCACCATCCTACATTCCCCCACAGAA
TTCTCAGTTCACTGCTCCGGCAAATCAACAACCATTGCAGCCAAGCTTCATCCCACAAAC
TAGCACACCAGCACTCCAGCCGGCCTTGATCTCTAGGGGGGCATCCCAGCCCCTTGGTGT
GCCAAATTCAGTGCCTACTAGTGGCAGCTTCCCGTTGCAGTCAAGTTCATCAGCTCCCCC
AGAAACAATCGTTTCTGCTTTGCAAGTCAATCAAACTGAGCCAGTGAAGAAGTTTGAGCC
CAGATCTAAACTGTGGTCTGATACTTTGAGCCGAGGTCTAGTCAATCTGGACATTTCTGG
ACCAAAAGCGAATCCTCATGCTGATATTGGAGTTGACTTTGATTCAATCAATCGCAAGGA
GAAAAGGCAGGAAAAGAAAATCAACCAAGCACCTGTGGTGTCTACAGTCACCATGGGCAA
GGCCATGGGAGCTGGTTCCGGCATTGGTCGGGCTGGTGTAGGTGCAATGGCACCTCCTCC
TAACCAAATGGGTGCCGGGAGGGGTATGGGTCCTGGTGCCGGTGCCGGTTATGGTGGTGG
AATGGGAATGAACCGGCCAATGGGCATGGGGATGGGAATGAATCAACAACAGATGAGGAT
GGGGATGAACCAACAACCGATGGGAATGGGGATGGGGATGAACCAACAACCGATGGGAGG
AATGAACATGGGGATGGGGATGAACCAGGGGATGCCGATGCGTCCTCCAATGGGGATGGG
TCCTGGTGGAATGCCCGGTGCTGGCTACAATCAGATGGGCGCGGCGTACGGTGGCCAGCA
GCCATACGGTGGATACAGGTGAGGAGGGGCTATGCAGTCCCCCACACCACAGATTTATGG
GGGCGAGGTGTTGAAGAAACGGTTTTGGAGGCATCTGTATTTTGCTCACCTGGTTTTGCT
TTGGGTATGATTTCTTGTTTCTTTTGGGGGTGGAGGTGAGAAGGGTATAATTTTCGTCAC
TATTCTTTTACAGTCTATGTTGGATACTGTACCTACTTTACTAAATAGCAAAAAGCAAAC
ATATGAACAAGGGCGGTGCTACAACTACTGCGTTGTGTTGGATGTAAAGCCTTGATATAT
TATCTCTTTCCCATGTAGTTGTGGCTATAGGCGGCTTCTTTTCAGTGAACATATTGTCTG
TTCCAGCGTTCTTGCTGGATGGATAGTAAATGGCTGTACCATTTGGTTGAATTATCATGG
TTTTTGCT