Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d051976_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:4:175714916:175730530:-1 gene:Zm00001d051976 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:starch synthase5 description: starch synthase5
Sequence	ATGAATCTTATTTCGGTGGCCTTTGGCATAAAAATAAAATATGGACTGGGTAAAGATACA CTCCTAGTGTGCAAAGAGATTACGTCAAGTGGTGTTGGTCTTGTAATAATAGAACCATCT CAGCTCTCCTATTTTAGTCGTGATATGTTACGTGGCTACCCTGATGACTTTGAGCGATTT TCCTATTTTTCCCGTGCATCCCTGGATTATATTGTTAAATCTGGAAAGCGGCCAGACATT ATACACATACATAACTGGGAAACTGCTATAGTGGCACCGCTTTTCTGGGAAATATTTGCT CACCAGGGACTTGGGAACACTCGGATATTACTGACATGCCAAGACTTGAATTCAGAATGC CTAGAGGAGCCAAATAAACTGGAGATGTGTGGGCTTGATCCCCGTAAGCTTCATCGTCCT GATCGTCTGCAGGATACAAACAAGACACATCTTGTTAATATTCTTAAGGGAGGCATTGTT TATTCAAATAAAGTCGTTTTGATGTCCTCAACACATTCAAAAGATGCTCTTATTCAGGGT TCACGACATGAGCTGCAATCAACATTAGCCGCACATAGGGAGAAGATATTGGTTGCATCT TATGGATTGGATGGTGAACTTTGGGATCCATTCAAAGACATTTATCTTCCTCGAAGGTAT TCTGCCAATGATATTGAGGGGAAGTCCATTTGCAGACAAGCACTTAGGCGTAGACTTCGG TTCAATGGTGATTCATCCATTATAGTAGGATGTATCTGTGATGATAATTCAGATGTCCAT AGTCTTAAAGAAGCAGTTCATGTTGCTCTGCACAGGAATACTCAGGTCATCATCATGGAA ACGTTAGGGTCTGTTGTGAACTCAATTTTGCAAGCATTAAAGGGAGAGATAAAGGGAGAC AAAATAGCATTTGTTGAGGCATATGATGAAGCTCTGGCACATTTAATATATGCAGGCTCT GATATCATTCTTTGCTCTTCCTTCCAAGATCCATCACTGCAAATAGCG

Peptide Sequence

PEP ID	Zm00001d051976_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:4:175714916:175730530:-1 gene:Zm00001d051976 transcript:Zm00001d051976_T005 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:starch synthase5 description: starch synthase5
Sequence	MNLISVAFGIKIKYGLGKDTLLVCKEITSSGVGLVIIEPSQLSYFSRDMLRGYPDDFERF SYFSRASLDYIVKSGKRPDIIHIHNWETAIVAPLFWEIFAHQGLGNTRILLTCQDLNSEC LEEPNKLEMCGLDPRKLHRPDRLQDTNKTHLVNILKGGIVYSNKVVLMSSTHSKDALIQG SRHELQSTLAAHREKILVASYGLDGELWDPFKDIYLPRRYSANDIEGKSICRQALRRRLR FNGDSSIIVGCICDDNSDVHSLKEAVHVALHRNTQVIIMETLGSVVNSILQALKGEIKGD KIAFVEAYDEALAHLIYAGSDIILCSSFQDPSLQIA

Transcript Sequence

Transcript ID	Zm00001d051976_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:175714916:175730530:-1 gene:Zm00001d051976 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:starch synthase5 description: starch synthase5
Sequence	GCCCACGTGCCACGTCCCACCTCCGCGAGCACGCACGCCGAACGGCGCCTCCTCGCACCG ATCAGCGCAGCGGCTCAGCGCCCGCCAGCCGCCATCAGGCAGCAGCCTCGCCTCTGGCCA TTGAAGCACACGGAATTGTCTCTTTCACCTGGGCAATCCGCGGAGAGGTACGGCGCGCAT AGCTAACCAAGGAGGCGTACGAGCAGCGTGCGTAGCAGGCAACCATGGAGACGCCGCGCC TCGTGGTCGGTGCGGCGTCGCGGGCCCCGCCACCAGCTCCTCGATCACAGCGACGGCGTA TCCTGCGTCCGTGCGGCGGGGCACATTGCTCCCCCTCCGCCCGCGCTGCTCCACCGGTGC TTCTAACCCGGTGCTCCTCCTACTCCTCTTCCAGGGAGGGGAACGGCGATTCTCATGGTA AGGCCCGCCGCGAGAGCTCCGGTTCCGTCCGGTTGGACGTCGAAGCAGATAGCGATCAGG TACCAAGTTTGGCTGACGAGCAACGTGAGGGTGATATTACAGAGCTCTTCAACCTGGCTC AACGGAGTAATTACTCTCCCCTTGCTTCACATTAATGCTTCACATAATGTTAATGTTCTG TATTTGTATCAGACCACAACTTAGTGTTGTAAATATAGAGAAATAAGTGACATGTTTCCT TCATATTTAAATAAATTAAATATTCTAATTCCGAATAAAACAAGCATATAACTCAGACAA ATGCCATATGTAATTATAACAGCAATGAACAGTAGCAATTCTAAGACATGTAAACATGTA AAATAGCTACACAGGTCCATTTGGAAATTAAACATGGCTTGCAGATGAAGAAGGCAGATT AAACAAATAAACATAATTGTTTATCTTAAAATATTGCTCTCAAAATAGCAGGTTGCTGTA ATAAACAGCCCTCCAACGCTAATAGGTGATCAGAGATCCTCGACTAACGTGACAGTCCTA TCTTACCAAATAAGGGTTTTAGATCAGATGTAATAAGCCTAATAATCAAATATAAATACT GATAGAAAGGAGCTGTGTACTTAATAAATTAACAAAATTTAACACAGGTAAACAACCTTA ACAAAGAGAGATTTAATTAGGCACAAATAATATCAATGCTGAAAATGATAATACACTAAA ACCCAGACTGTCACGTTGTCTCACTACACCGCTATCATCATCGAGCACACAAATCCGTCC ACAACAGTGCAATCACACCCAAGTATTTAATACTAGCAGATTGCACAAAATTAAACAGTA AATAAAGTGAGGCAACGAATAACTCACAACACGTAGATTGTCTACGTGGGAAGATCAGCT CAGCGAACACGAAGTTCTGTCCCAGAAAACCAATTCCGCCGCCCACGTCCGGGCCTGCAC GGCGGGAGGTTGACGGAGATACTAGAGCCGCTGCCGGAACCGAGGGAGACGTCCACGGCA CCAGCCCGAGAAGATGAACACCGCGCAGCAGGGAGCTCAAGCACCAGGCCACGGTGGACA GAGATCAGACAAGAATCAGAGCACCGGAGAAGTGCACGATTCCGGCAACAGAGCACAGAT ATCCTGTACATTAACAAGCAGCGGCTTATTGCCATGGAGGAGATGAAGAAACTGCATGAT GAAAATAATTTGCTTCTCGAGGAAATACAAGGACTAGAAACAGAAATGCAAGGTATTCCC CTAGAAGCAGCACAGTCGTCAAGTTTCAGTGAGTTACTCCTGCGGATAGATACAATGGTC ATTTCTGGAATGATCAGCATGACGGAAGCATCTGATTTAAGAGAGAAACTTGTCACTAAT AGAAGCATAATACAAAGCACCTTTTGTGATATTCATCATAAGCCAAATACTGAATTGCTG TCTGAACTGCAACTCTTTTTGCGTAAACCAATAGAGTATGCTACCACTTACCTTACTTTT TTTTCCCAGTTTTACCGCCTTTTACTCAAATTTTCTGCAGTGTTGCGGGATACCTATGTC CATTTTTTATTGCTGCCATGACAACTTGACACAGCGAATTGCCCATTGACACCTGACATG GCCTGGCTCATATCTGATACATTGAGAAAGAATCTTGCTGCAGAGGGCAAGAGGAAGCTC ATGTGTGTTATCCATGAGAGGGAAAAATGGCAGAAGACAATGATAGGTGTGTAGCCGTAG AGAGGGAATCACTTTAAATGCTGGTTAAGACAATGATAGGTGTGTAGCCGTAGAGAGGGA ATCACTTTAAATGCTGGTTTTGACTGTTGTTCTATGCACAAACTGTAGCTAATCTGGAGC TTTTGCTGTAATCCCAGGTCTTTTCCTTTGGTAAAGCACACAATGGAATCTTTAGTGTCC TTTTAGTTTGTTTTATAGTAAATAGGATTAATCTTAGATTTTTTTTAACGACATAGGAGA GTTGCATGTCATTTTACTAAGAAGAGGGATTAATATTGTACTTAATATTTGAAGAGCTAA AATGCTGTTCTATTTTTTAAAATTTATTAGAAGAATTCCTGAATCCTATTTTTCTGAGCC TGCCTAGCTAAACACCTGCATCTGTATCGGATTCTGGTTCCCACACCTGCGTCCTGGTAA CACTATTTTTGCCTATGTTTTGAATCTTTTGGCTGCCTCCCTATGTATAATTTTTGGCCC CGCCACTGCTTCCCGCTGATATTTCACCTAGTGTATCTGCAATTACTTTATAATAATCAT GCGACATATTTAATTTGTCTTGTTTTATCATATTTGTTGATGCTATATTTGAGCCTATGT TCAATGCAGGAAACCTCTTCATATTGTGCACATCTGTAGTGAAATGTACCCAGTAGCATC ATGTGGACCATTATCAGCATATGTTGCCAGTTTATCTTGTGAGATTCAAAAAAAGGCTAA CTTGGTGGAGGTGATACTACCCAAGTACACCAGCATAAACTTGGATGGAATTCATGGTCT AAGGAGATCTGAGGCAGAATATGAATCTTATTTCGGTGGCCTTTGGCATAAAAATAAAAT ATGGACTGGGTAAAGATACACTCCTAGTGTGCAAAGAGATTACGTCAAGTGGTGTTGGTC TTGTAATAATAGAACCATCTCAGCTCTCCTATTTTAGTCGTGATATGTTACGTGGCTACC CTGATGACTTTGAGCGATTTTCCTATTTTTCCCGTGCATCCCTGGATTATATTGTTAAAT CTGGAAAGCGGCCAGACATTATACACATACATAACTGGGAAACTGCTATAGTGGCACCGC TTTTCTGGGAAATATTTGCTCACCAGGGACTTGGGAACACTCGGATATTACTGACATGCC AAGACTTGAATTCAGAATGCCTAGAGGAGCCAAATAAACTGGAGATGTGTGGGCTTGATC CCCGTAAGCTTCATCGTCCTGATCGTCTGCAGGATACAAACAAGACACATCTTGTTAATA TTCTTAAGGGAGGCATTGTTTATTCAAATAAAGTCGTTTTGATGTCCTCAACACATTCAA AAGATGCTCTTATTCAGGGTTCACGACATGAGCTGCAATCAACATTAGCCGCACATAGGG AGAAGATATTGGTTGCATCTTATGGATTGGATGGTGAACTTTGGGATCCATTCAAAGACA TTTATCTTCCTCGAAGGTATTCTGCCAATGATATTGAGGGGAAGTCCATTTGCAGACAAG CACTTAGGCGTAGACTTCGGTTCAATGGTGATTCATCCATTATAGTAGGATGTATCTGTG ATGATAATTCAGATGTCCATAGTCTTAAAGAAGCAGTTCATGTTGCTCTGCACAGGAATA CTCAGGTCATCATCATGGAAACGTTAGGGTCTGTTGTGAACTCAATTTTGCAAGCATTAA AGGGAGAGATAAAGGGAGACAAAATAGCATTTGTTGAGGCATATGATGAAGCTCTGGCAC ATTTAATATATGCAGGCTCTGATATCATTCTTTGCTCTTCCTTCCAAGATCCATCACTGC AAATAGCGGT