Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d051951_T010
CDS Infomation

cds chromosome:B73_RefGen_v4:4:175154557:175157191:1 gene:Zm00001d051951 gene_biotype:protein_coding transcript_biotype:protein_coding description:casein kinase I
Sequence

ATGCATCAAAAGGGGTTTCTTCACCGTGATATAAAGCCTGATAATTTCCTCATGGGGCTT
GGTAGGAAAGCCAATCAGGTATATATAATAGACTATGGACTAGCGAAAAAATATAGGGAC
CTTCAAACTCATAAGCACATCCCGTACAGAGAGAACAAGAACCTCACTGGAACTGCACGA
TATGCAAGTGTCAACACCCACCTTGGTGTTGAGCAAAGCAGGCGAGATGATTTAGAATCC
CTCGGTTATGTTCTTATGTACTTCCTTAGGGGCAGCCTACCATGGCAGGGGCTGAAGGCA
GGAACCAAGAAGCAGAAATATGACAAGATCAGCGAGAAAAAGATGCTCACTCCTGTGGAG
GTACTCTGCAAATCGTACCCATCAGAGTTCATCTCCTACTTCCACTACTGCCGTTCGTTG
CGGTTTGAAGACAAGCCTGACTATTCTTACCTGAAGAGACTATTCCGCGATCTCTTTATC
CGGGAAGGATACCAGTTCGACTACGTGTTTGACTGGACCATTCTAAAGTATCCTCAAATA
GGCTCCAACCCACGGACCAGGGCCGGTGAAAGAACTAGTGGCGCTGCTGGACCCTCAATG
GATAGGATTGAGAAGACCCCAGGAGAAGCGTCCGGTAGAAGGAACCCTAGTGGTCCTGTG
AATCAGAGCGACAGTTACGCGCAACGGCCACGCGAGACCGTATCCATGTCGCTAAAGGAG
ATTATGCATAGCACTGACCGGTCTGGGGAAAGGACTGTGGAGAGACCACGCACGTCCTCA
CGCACAGGCAGCGCATCCCGCAGAGCCGTTGCGTCAAGCAGCAGGCCAGCAACCTCGTCC
ATGGAACCAAGCGAGCAGCAGTATAGCCGGGCGAGCAGACTGTTCTCTAGCAACAGTGGC
AGCCGGCCATCCAGCGCCCAGAGAGTCAACCCTGCGCCGGGCGAGTCTAGGGCCACCTCC
CTTTCGCGGGCAGCGGTCGCGAGAGGCTCCCGCGACGAGCCACTCCACCGCAGCCTGGAG
CTCCTTTCCCTTGGCAGCGGCAAGAGGAAATAG

Peptide Sequence

PEP ID

Zm00001d051951_P010
PEP Infomation

pep chromosome:B73_RefGen_v4:4:175154557:175157191:1 gene:Zm00001d051951 transcript:Zm00001d051951_T010 gene_biotype:protein_coding transcript_biotype:protein_coding description:casein kinase I
Sequence

MHQKGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHKHIPYRENKNLTGTAR
YASVNTHLGVEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISEKKMLTPVE
VLCKSYPSEFISYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQI
GSNPRTRAGERTSGAAGPSMDRIEKTPGEASGRRNPSGPVNQSDSYAQRPRETVSMSLKE
IMHSTDRSGERTVERPRTSSRTGSASRRAVASSSRPATSSMEPSEQQYSRASRLFSSNSG
SRPSSAQRVNPAPGESRATSLSRAAVARGSRDEPLHRSLELLSLGSGKRK

Transcript Sequence

Transcript ID

Zm00001d051951_T010
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:175154557:175157191:1 gene:Zm00001d051951 gene_biotype:protein_coding transcript_biotype:protein_coding description:casein kinase I
Sequence

GATTAACCGGGTTGAGTACATGCATCAAAAGGGGTTTCTTCACCGTGATATAAAGCCTGA
TAATTTCCTCATGGGGCTTGGTAGGAAAGCCAATCAGGTATATATAATAGACTATGGACT
AGCGAAAAAATATAGGGACCTTCAAACTCATAAGCACATCCCGTACAGAGAGAACAAGAA
CCTCACTGGAACTGCACGATATGCAAGTGTCAACACCCACCTTGGTGTTGAGCAAAGCAG
GCGAGATGATTTAGAATCCCTCGGTTATGTTCTTATGTACTTCCTTAGGGGCAGCCTACC
ATGGCAGGGGCTGAAGGCAGGAACCAAGAAGCAGAAATATGACAAGATCAGCGAGAAAAA
GATGCTCACTCCTGTGGAGGTACTCTGCAAATCGTACCCATCAGAGTTCATCTCCTACTT
CCACTACTGCCGTTCGTTGCGGTTTGAAGACAAGCCTGACTATTCTTACCTGAAGAGACT
ATTCCGCGATCTCTTTATCCGGGAAGGATACCAGTTCGACTACGTGTTTGACTGGACCAT
TCTAAAGTATCCTCAAATAGGCTCCAACCCACGGACCAGGGCCGGTGAAAGAACTAGTGG
CGCTGCTGGACCCTCAATGGATAGGATTGAGAAGACCCCAGGAGAAGCGTCCGGTAGAAG
GAACCCTAGTGGTCCTGTGAATCAGAGCGACAGTTACGCGCAACGGCCACGCGAGACCGT
ATCCATGTCGCTAAAGGAGATTATGCATAGCACTGACCGGTCTGGGGAAAGGACTGTGGA
GAGACCACGCACGTCCTCACGCACAGGCAGCGCATCCCGCAGAGCCGTTGCGTCAAGCAG
CAGGCCAGCAACCTCGTCCATGGAACCAAGCGAGCAGCAGTATAGCCGGGCGAGCAGACT
GTTCTCTAGCAACAGTGGCAGCCGGCCATCCAGCGCCCAGAGAGTCAACCCTGCGCCGGG
CGAGTCTAGGGCCACCTCCCTTTCGCGGGCAGCGGTCGCGAGAGGCTCCCGCGACGAGCC
ACTCCACCGCAGCCTGGAGCTCCTTTCCCTTGGCAGCGGCAAGAGGAAATAGCGGGAAGG
AAGCCGATCTGATAGCGGAAGGGAAAAGAATGCCTGTTGGCGACTCTGTAAATGACGGGT
TCTTCCCCTGGGGCATCCCGTAATTTCATGGTGCCCGCCCCGGCCTTTTACCATGGCTCC
GTAGATAGCAATAATTCGTTGTTGAATGTGCGTGCTGTGTTGCAGTCGCGTTAGGGCCAA
GTCCTAGCCTTTGTGGTGATTAGATTTAGGGGGTGGTCAAGATTCACATATTTATGTTTC
TTAACCCTCTCCTGGACTTGGTGCCCGTGCGTTTCTTGTTGAACTCTGAATTTGCTTATT
CAA