Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d051946_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:4:174992395:174996225:-1 gene:Zm00001d051946 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transducin/WD40 repeat-like superfamily protein
Sequence

ATGTCCTCCCGCCTCAAGGATCGCGGCGGCGGCAGGGCCACGGCCGCGGCCACCCGCCCG
CTCACCCCGAAGCCCTTCTCCATTTCGTCATCCGCCCGGCAGACGACCGCCGCCGCCGGG
AAGGAGAACACGGCGTCCAAGCCGTCCAAGCCCACCTCCGCCGTGCGGTGGTCCACGTCG
TCGCTCCCGCGGGCCAGCAGGATCCAAAGCTCGGTGGACTCCTCCAAGCTCGCCTCCACC
CTCAGGGCTCCCGTGCTGCCGGGGAGGACTTCCATCAGTAAGGATCCCGTGGTGGAGGCA
GGCTTGCGGCGGAGCGTCAGTGGTGGGATCAGGGCTTCTTCTGTAGAGAAAGGGAGGAGG
TCGATTAGTGTTGTTGGATCCAGGGCCTCCGAGGCTAGGAGAGGGAGTGCTGGCGCTGGT
AGTGATGACACTGGTAGAAGGGCGAGGTTTGATGCGAAGGCGAAGGGGTCGGATGAGATC
AGCAGGAAAAGAGGTGACCTTGATGCCAAGGGGAAGCAGACTGATGAGATTGGCAGGAAA
AGGGAGAGCTTTGATGCAAAGGCCAAGCAGATCGGTGGGAAAAGAGATAGCTTTTGTGTG
AATGTGTTGAAGCAATGTGATGAGAACAAAGGGAAAACAAATGCATTCGTGACTAATATG
AAGAAGCAATGTGAAGATGTTGGTGGGCAAATAAAGGGCTCTGATTCAAAGGTAAAGGCA
GCTGAAGAAATCAATATGAAGAAAGAGGGGCCCAATAAATTGATGAAGGAGATGAATACC
AAAAAGGCTGATCCAGGAGAGGCTGCTTCCAAATCTGTGGAATGTTGTGCCATCCAGAAG
GATGACGATATAGGCAAGACTTCTGTCATCCCTGTTTTCACTGTCCATGTGGTGAATTCA
AATGATGTCCCTGATCCAATAAGGAAACAGCAAAAGAATAATGAAGAGGGCAGGAAGCAG
GAAGAAAAGGTAAAATTGGCAGACAGGATAGGAGTTTTTGAGAAAGTGGCTGCAGGTGGG
GAGGGAGGGTCAGCAAAACCCGTGTCTGCTATGAACAGGTACCCAAGCAAATTACATGAG
AAACTAGCCGCGCTGGAAGGGAGGGTTCAGAAGATTGCTACCGATATCAAGAAAACCAAA
GAAATGCTTGATGAGAACAACCCGAATGAGCCAAAACAGATCTTGTCAAATATCCAGAAG
GAAATCACTGCCATTGAGAAGGCAATTTCTCATGTAAAGGATGATAATAAGATACAGCTG
GGTACTGCAGATAGCAGTGAATGTGAGAGCTCTCACCCTGAAACAGCTGAAAAATGTACC
ATAACAAAGCCAGGTAACCTGAAGCAAGCTGGAAAAGGCTTGAATGCTGATGAGCTGGAG
GCAAGGTTCTTTCCACACCACAAATTGTTGAGGGGTCGCATATCTTCAACTTCTACTCAA
CAGGAGTTATCTGTGGATGCAAAAAAAGATTGTAGTGGAAAAACAAGACCTGCCGCATCT
GATCCTGGCGATGATGAGAACAGTATAGCCATGGAGTTTCTGGCTTCTTTAGATGGGGAA
GAAAATGATTTCTTCAAGGATCGTCGAGCTAAGAAATTGGAAAAGAATAAAATATGTGAA
GTAGCAGATGCTACCAGCAAGACATCAAGTCAAGGTAGCACAAAGAATCCAGTTGCTCCC
AATCATAAGGATGAAGTTGAATTGCTTGCTACAGAGGAGCTAGAAGAATTTGATGATCAG
GAAAACAAGTCATCCATGATGTTACAGGAAGAAACTGAGGAGTCATGCAATAGTCAGTTA
TCGGGTATAGGAAACAAGTCTTCAACTGGTGGATGGTTTGTTTCAGAGGGGGAAGCTGTG
CTTCTTGCTCATGGAGATGGCACATGCTCCTATTATGACATTGCAAACCATGAGTTCAAA
TCTGAGTACAAGCCTCCCAGCTTGGTATCAAATAATACGTGGGGCGATTGCTGGTTGATT
CGTGCCCCAGGCGTAGATGGATGTTCTGGTAGATTTGTTGTTGCTGCATCGGCTGGGAAT
GCATTGGAGCCTGGGTTTTGCAGCTGGGATTACTATACCAGAGAAGTAAAATCATTTCAT
GTCGAGGAGGAAGCTTCTCAAACTTTTGCTCCAACATCCAGGGCTATTCTTGGTGCTCTC
TCTAATGTAGGCTCATCAAGATCCAGCTCTGCGCTGTCAAATACAGAGAGGCAGCAATGG
TGGTATAAACCATGCGGACCTCTCCTGCTATCTACTGCTAGCAAGCAAAAGATGGTCACA
GCTTATGATATACGTGACGGTGATGTTGTGATGAAATGGGAAGTTAGCAATCTAGTAATG
GGAATGGAATACTCCAGCCCACTACAATGGCGTAGCAGGGGGAAAGTAGTAATTGCTGGG
AGTGAATCAATAGGGCTGTGGGATGTGAATTCACTTAACCCACAACCCTTGTTGTCTGTT
GCTTCTGGTAAGAAAGTGTACTGCCTTCACGTGAATAACACTGATGCTGAGGTGGGCGGC
GGAGTGCGTCAAAGGGTTAGTTCATCTGAGGTGGAAGGAAATGATGGTGTTTTCAGCACA
CAGGAAAGTGTCAATGTATTTGATTTTCGTGTACCTGCTGGCATTGGGCTTAAAATAGCA
AGACATGGCGGCACAGCAAACTCAATCTTTTCACGTGGGGACTCGGTATTTATTGGTAGC
ACAGAAGGAAGGCTGCAAATAAAAGGAGGGTCAAGATCACGAGTTCAGCAATACTCGTTG
AGAAAGGGGAAACTTGTCGCCACCTATGAGTTACCCGAATTCAACGCTCATATCCATCAC
TCTGCGATAACCCAAGTATGGGGCGACTCAAACCTTGTCTTGGCTGCATGTGGTATGGGG
CTGTTCGCCTTTGACACGTTTAAGGAAGACACGCAGCCAACCTACAGCTTTGACCGTGGA
AACACCATTGCAGCGAGAGAAGCTATTGGCCCTGATGATCTGTACTGTCCTACATTTGAC
TACTCATCATCAAGGGTTCTTCTCGTCTCAAGAGACCGCCCGGCACATTGGAGGTACTTG
TAG

Peptide Sequence

PEP ID

Zm00001d051946_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:4:174992395:174996225:-1 gene:Zm00001d051946 transcript:Zm00001d051946_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transducin/WD40 repeat-like superfamily protein
Sequence

MSSRLKDRGGGRATAAATRPLTPKPFSISSSARQTTAAAGKENTASKPSKPTSAVRWSTS
SLPRASRIQSSVDSSKLASTLRAPVLPGRTSISKDPVVEAGLRRSVSGGIRASSVEKGRR
SISVVGSRASEARRGSAGAGSDDTGRRARFDAKAKGSDEISRKRGDLDAKGKQTDEIGRK
RESFDAKAKQIGGKRDSFCVNVLKQCDENKGKTNAFVTNMKKQCEDVGGQIKGSDSKVKA
AEEINMKKEGPNKLMKEMNTKKADPGEAASKSVECCAIQKDDDIGKTSVIPVFTVHVVNS
NDVPDPIRKQQKNNEEGRKQEEKVKLADRIGVFEKVAAGGEGGSAKPVSAMNRYPSKLHE
KLAALEGRVQKIATDIKKTKEMLDENNPNEPKQILSNIQKEITAIEKAISHVKDDNKIQL
GTADSSECESSHPETAEKCTITKPGNLKQAGKGLNADELEARFFPHHKLLRGRISSTSTQ
QELSVDAKKDCSGKTRPAASDPGDDENSIAMEFLASLDGEENDFFKDRRAKKLEKNKICE
VADATSKTSSQGSTKNPVAPNHKDEVELLATEELEEFDDQENKSSMMLQEETEESCNSQL
SGIGNKSSTGGWFVSEGEAVLLAHGDGTCSYYDIANHEFKSEYKPPSLVSNNTWGDCWLI
RAPGVDGCSGRFVVAASAGNALEPGFCSWDYYTREVKSFHVEEEASQTFAPTSRAILGAL
SNVGSSRSSSALSNTERQQWWYKPCGPLLLSTASKQKMVTAYDIRDGDVVMKWEVSNLVM
GMEYSSPLQWRSRGKVVIAGSESIGLWDVNSLNPQPLLSVASGKKVYCLHVNNTDAEVGG
GVRQRVSSSEVEGNDGVFSTQESVNVFDFRVPAGIGLKIARHGGTANSIFSRGDSVFIGS
TEGRLQIKGGSRSRVQQYSLRKGKLVATYELPEFNAHIHHSAITQVWGDSNLVLAACGMG
LFAFDTFKEDTQPTYSFDRGNTIAAREAIGPDDLYCPTFDYSSSRVLLVSRDRPAHWRYL

Transcript Sequence

Transcript ID

Zm00001d051946_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:174992395:174996225:-1 gene:Zm00001d051946 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transducin/WD40 repeat-like superfamily protein
Sequence

GAAACAACCCTTCCCCTAATTTTCAAATCAATCAATCAAGCAATCCCAAATCCAAATCAG
AGCGACCTTTCCTCTCGCCCCATCTTCCCCGAATCCCCGGATCCCCCAAACCCTAGCACT
GCATCCCCTCCCGCTATGTCCTCCCGCCTCAAGGATCGCGGCGGCGGCAGGGCCACGGCC
GCGGCCACCCGCCCGCTCACCCCGAAGCCCTTCTCCATTTCGTCATCCGCCCGGCAGACG
ACCGCCGCCGCCGGGAAGGAGAACACGGCGTCCAAGCCGTCCAAGCCCACCTCCGCCGTG
CGGTGGTCCACGTCGTCGCTCCCGCGGGCCAGCAGGATCCAAAGCTCGGTGGACTCCTCC
AAGCTCGCCTCCACCCTCAGGGCTCCCGTGCTGCCGGGGAGGACTTCCATCAGTAAGGAT
CCCGTGGTGGAGGCAGGCTTGCGGCGGAGCGTCAGTGGTGGGATCAGGGCTTCTTCTGTA
GAGAAAGGGAGGAGGTCGATTAGTGTTGTTGGATCCAGGGCCTCCGAGGCTAGGAGAGGG
AGTGCTGGCGCTGGTAGTGATGACACTGGTAGAAGGGCGAGGTTTGATGCGAAGGCGAAG
GGGTCGGATGAGATCAGCAGGAAAAGAGGTGACCTTGATGCCAAGGGGAAGCAGACTGAT
GAGATTGGCAGGAAAAGGGAGAGCTTTGATGCAAAGGCCAAGCAGATCGGTGGGAAAAGA
GATAGCTTTTGTGTGAATGTGTTGAAGCAATGTGATGAGAACAAAGGGAAAACAAATGCA
TTCGTGACTAATATGAAGAAGCAATGTGAAGATGTTGGTGGGCAAATAAAGGGCTCTGAT
TCAAAGGTAAAGGCAGCTGAAGAAATCAATATGAAGAAAGAGGGGCCCAATAAATTGATG
AAGGAGATGAATACCAAAAAGGCTGATCCAGGAGAGGCTGCTTCCAAATCTGTGGAATGT
TGTGCCATCCAGAAGGATGACGATATAGGCAAGACTTCTGTCATCCCTGTTTTCACTGTC
CATGTGGTGAATTCAAATGATGTCCCTGATCCAATAAGGAAACAGCAAAAGAATAATGAA
GAGGGCAGGAAGCAGGAAGAAAAGGTAAAATTGGCAGACAGGATAGGAGTTTTTGAGAAA
GTGGCTGCAGGTGGGGAGGGAGGGTCAGCAAAACCCGTGTCTGCTATGAACAGGTACCCA
AGCAAATTACATGAGAAACTAGCCGCGCTGGAAGGGAGGGTTCAGAAGATTGCTACCGAT
ATCAAGAAAACCAAAGAAATGCTTGATGAGAACAACCCGAATGAGCCAAAACAGATCTTG
TCAAATATCCAGAAGGAAATCACTGCCATTGAGAAGGCAATTTCTCATGTAAAGGATGAT
AATAAGATACAGCTGGGTACTGCAGATAGCAGTGAATGTGAGAGCTCTCACCCTGAAACA
GCTGAAAAATGTACCATAACAAAGCCAGGTAACCTGAAGCAAGCTGGAAAAGGCTTGAAT
GCTGATGAGCTGGAGGCAAGGTTCTTTCCACACCACAAATTGTTGAGGGGTCGCATATCT
TCAACTTCTACTCAACAGGAGTTATCTGTGGATGCAAAAAAAGATTGTAGTGGAAAAACA
AGACCTGCCGCATCTGATCCTGGCGATGATGAGAACAGTATAGCCATGGAGTTTCTGGCT
TCTTTAGATGGGGAAGAAAATGATTTCTTCAAGGATCGTCGAGCTAAGAAATTGGAAAAG
AATAAAATATGTGAAGTAGCAGATGCTACCAGCAAGACATCAAGTCAAGGTAGCACAAAG
AATCCAGTTGCTCCCAATCATAAGGATGAAGTTGAATTGCTTGCTACAGAGGAGCTAGAA
GAATTTGATGATCAGGAAAACAAGTCATCCATGATGTTACAGGAAGAAACTGAGGAGTCA
TGCAATAGTCAGTTATCGGGTATAGGAAACAAGTCTTCAACTGGTGGATGGTTTGTTTCA
GAGGGGGAAGCTGTGCTTCTTGCTCATGGAGATGGCACATGCTCCTATTATGACATTGCA
AACCATGAGTTCAAATCTGAGTACAAGCCTCCCAGCTTGGTATCAAATAATACGTGGGGC
GATTGCTGGTTGATTCGTGCCCCAGGCGTAGATGGATGTTCTGGTAGATTTGTTGTTGCT
GCATCGGCTGGGAATGCATTGGAGCCTGGGTTTTGCAGCTGGGATTACTATACCAGAGAA
GTAAAATCATTTCATGTCGAGGAGGAAGCTTCTCAAACTTTTGCTCCAACATCCAGGGCT
ATTCTTGGTGCTCTCTCTAATGTAGGCTCATCAAGATCCAGCTCTGCGCTGTCAAATACA
GAGAGGCAGCAATGGTGGTATAAACCATGCGGACCTCTCCTGCTATCTACTGCTAGCAAG
CAAAAGATGGTCACAGCTTATGATATACGTGACGGTGATGTTGTGATGAAATGGGAAGTT
AGCAATCTAGTAATGGGAATGGAATACTCCAGCCCACTACAATGGCGTAGCAGGGGGAAA
GTAGTAATTGCTGGGAGTGAATCAATAGGGCTGTGGGATGTGAATTCACTTAACCCACAA
CCCTTGTTGTCTGTTGCTTCTGGTAAGAAAGTGTACTGCCTTCACGTGAATAACACTGAT
GCTGAGGTGGGCGGCGGAGTGCGTCAAAGGGTTAGTTCATCTGAGGTGGAAGGAAATGAT
GGTGTTTTCAGCACACAGGAAAGTGTCAATGTATTTGATTTTCGTGTACCTGCTGGCATT
GGGCTTAAAATAGCAAGACATGGCGGCACAGCAAACTCAATCTTTTCACGTGGGGACTCG
GTATTTATTGGTAGCACAGAAGGAAGGCTGCAAATAAAAGGAGGGTCAAGATCACGAGTT
CAGCAATACTCGTTGAGAAAGGGGAAACTTGTCGCCACCTATGAGTTACCCGAATTCAAC
GCTCATATCCATCACTCTGCGATAACCCAAGTATGGGGCGACTCAAACCTTGTCTTGGCT
GCATGTGGTATGGGGCTGTTCGCCTTTGACACGTTTAAGGAAGACACGCAGCCAACCTAC
AGCTTTGACCGTGGAAACACCATTGCAGCGAGAGAAGCTATTGGCCCTGATGATCTGTAC
TGTCCTACATTTGACTACTCATCATCAAGGGTTCTTCTCGTCTCAAGAGACCGCCCGGCA
CATTGGAGGTACTTGTAGGCTGTAGCTAGCTATTTCTTGTTTATTTTGTGTGCAACATGC
CATGTAATATATGCACTTTGTTTATGCTTCACATGTGGTGTCATCTGCCGTGTCAACCAT
CTCGCGCTTTCACTGTAATATTATCTAGTTTTTACCCCTGCAATTATAAATTATTTTCAG
TCTTCTGTACTTCTCTCTTATTTTGTGCCTTGCATGTTTTCATGCTGTTTCTCATCTCTT
GGTTGAAACACTATTTATGGAAACATGGTTCAAATTCTGTTTGACCACCATGTATTTTCA
TG