Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d051938_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:4:174854965:174856718:-1 gene:Zm00001d051938 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cinnamoyl-CoA reductase 1
Sequence	ATGTCGTCCAACTGCGGCGAGGATGAGAAGGAGCTGGTGTGCGTGACCGGCGCCGGCGGC TTCATCGGCTCGTGGGTGGTGAATGAGCTGCTCCAGCGGGGTTACCGCGTCAGGGGAACC GCGAGGGACCCTGCGGACAGCAAGAACGCGCACCTGCTGGCTCTGGAGGGAGCCAAGGAG CGCCTCACCCTGTGCCGCGCCGACGTCCTCGACCGCGCCTCCCTGCGCGCCGCCTTCGCC GGCTGCCACGGCGTCTTCCACGTCGCCTCCCCGGTGTCCAACGACCCGGTCAGTCTCAGT CGTCGTTTTACTTGCCCTCTCCCTCTCTCTCTCCTTCAATTTTTCTTTCAGACTCAGTGC TCACGCCTCACCACGCCGCTTGCGTCCGCGCCCGGCCCGCAGGAGCTTGTCCCGGTGGCG GTGGAGGGCACCAGGAACGTCATCAACGCCGCGGCGGACGAGGGCGCGCGCCGTGTCGTC TTCACCTCCTCCTATGGCGCCGTGCACATGGACCCCAGCCGGAGCCCCGACGCCGTCCTC GACGAGACCTGCTGGAGCGACTACGACTTCTGCAAGCGAACCGACAACCTGTACTGCTGC GCCAAGATGATGGCGGAGGTGACGGCGGCGGCGGAGGCGGACGCGCGGGGCCTGCAGCTG GCCGTGGTGCTGCCCTGCATGACCACGGGCCCCATGCTGCAGCAGACGCTCAACTTCAGC ACCAACCACGTCGCGCGCTACCTCATGGGCACCAAGCGCTCCATCCCCAACGCCGTCGCC GCCTACGTCGACGTCCGCGACGTCGCGCGCGCGCACGTGCTCGCCTACGAGCGCCCCGGA GCCAGGGGCCGGTACCTCTGCATCGGCACCGTGCTGCACCGCGCCGACCTCGTCGACATG CTCAGAGACCTCTTTCCGCAGTACCCCGTCACGGCCAAGTGCGAGGAGGACGGCAAGCCA ATGGCGAAGCCGTTCAAGTTCTCCAACCAGAGGCTCAGGGACCTGGGGCTGGAGTTCACT CCGCTGAGGAAGAGCCTGTACGAGACCGTGCTGTGCCTGCAGCAGAAGGGCCACCTGCCT GTCATCCAACCGCAGCAGCGCGCGTACCTGTGA

Peptide Sequence

PEP ID	Zm00001d051938_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:4:174854965:174856718:-1 gene:Zm00001d051938 transcript:Zm00001d051938_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cinnamoyl-CoA reductase 1
Sequence	MSSNCGEDEKELVCVTGAGGFIGSWVVNELLQRGYRVRGTARDPADSKNAHLLALEGAKE RLTLCRADVLDRASLRAAFAGCHGVFHVASPVSNDPVSLSRRFTCPLPLSLLQFFFQTQC SRLTTPLASAPGPQELVPVAVEGTRNVINAAADEGARRVVFTSSYGAVHMDPSRSPDAVL DETCWSDYDFCKRTDNLYCCAKMMAEVTAAAEADARGLQLAVVLPCMTTGPMLQQTLNFS TNHVARYLMGTKRSIPNAVAAYVDVRDVARAHVLAYERPGARGRYLCIGTVLHRADLVDM LRDLFPQYPVTAKCEEDGKPMAKPFKFSNQRLRDLGLEFTPLRKSLYETVLCLQQKGHLP VIQPQQRAYL

Transcript Sequence

Transcript ID	Zm00001d051938_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:174854965:174856718:-1 gene:Zm00001d051938 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cinnamoyl-CoA reductase 1
Sequence	ACCACACAACACAACACACCATCTGTCGACTGGTAGCAGAGAGAAGAGATAGACCGAGAG AGGGAGGGAGAGAGAGAACCTGACACTGAGACTGAAGCATCGGCGCTAGCTAGCTTGGGC AGCAACATCACGATGTCGTCCAACTGCGGCGAGGATGAGAAGGAGCTGGTGTGCGTGACC GGCGCCGGCGGCTTCATCGGCTCGTGGGTGGTGAATGAGCTGCTCCAGCGGGGTTACCGC GTCAGGGGAACCGCGAGGGACCCTGCGGACAGCAAGAACGCGCACCTGCTGGCTCTGGAG GGAGCCAAGGAGCGCCTCACCCTGTGCCGCGCCGACGTCCTCGACCGCGCCTCCCTGCGC GCCGCCTTCGCCGGCTGCCACGGCGTCTTCCACGTCGCCTCCCCGGTGTCCAACGACCCG GTCAGTCTCAGTCGTCGTTTTACTTGCCCTCTCCCTCTCTCTCTCCTTCAATTTTTCTTT CAGACTCAGTGCTCACGCCTCACCACGCCGCTTGCGTCCGCGCCCGGCCCGCAGGAGCTT GTCCCGGTGGCGGTGGAGGGCACCAGGAACGTCATCAACGCCGCGGCGGACGAGGGCGCG CGCCGTGTCGTCTTCACCTCCTCCTATGGCGCCGTGCACATGGACCCCAGCCGGAGCCCC GACGCCGTCCTCGACGAGACCTGCTGGAGCGACTACGACTTCTGCAAGCGAACCGACAAC CTGTACTGCTGCGCCAAGATGATGGCGGAGGTGACGGCGGCGGCGGAGGCGGACGCGCGG GGCCTGCAGCTGGCCGTGGTGCTGCCCTGCATGACCACGGGCCCCATGCTGCAGCAGACG CTCAACTTCAGCACCAACCACGTCGCGCGCTACCTCATGGGCACCAAGCGCTCCATCCCC AACGCCGTCGCCGCCTACGTCGACGTCCGCGACGTCGCGCGCGCGCACGTGCTCGCCTAC GAGCGCCCCGGAGCCAGGGGCCGGTACCTCTGCATCGGCACCGTGCTGCACCGCGCCGAC CTCGTCGACATGCTCAGAGACCTCTTTCCGCAGTACCCCGTCACGGCCAAGTGCGAGGAG GACGGCAAGCCAATGGCGAAGCCGTTCAAGTTCTCCAACCAGAGGCTCAGGGACCTGGGG CTGGAGTTCACTCCGCTGAGGAAGAGCCTGTACGAGACCGTGCTGTGCCTGCAGCAGAAG GGCCACCTGCCTGTCATCCAACCGCAGCAGCGCGCGTACCTGTGATGTGAAACAACCGAC ATATATAAACATGCATGCAATGAGGCAAACGACACACACGTCAGTGGAAGAACGAGAAGA TGACATAAGGAATCTGAGAACTTTTTATTAAGTGTATATTCATGTTACTTTTCAGTATCT ACGGGTGTATTACGTTTTACGTTCTTAAAACAAAAGCTTTTGCTGTTGTACAATTATTAT ATAGACAAGTTACTTATGAATAGTAAGTTTTATTT