Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d051902_T008
CDS Infomation

cds chromosome:B73_RefGen_v4:4:173988559:173993609:-1 gene:Zm00001d051902 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pumilio homolog 4
Sequence

ATGGCTCCATCTCAAGCGGCGGCAGCGGCTGGCCCCACCTTTGAGGACCTCGAGCGCGAC
CTGCAGGCAGTTCTCATGGACCAAAACCACATGTCCCCAGTGGACGACCTCGGCATGTTT
CGCAGCGGCAGCGCTCCCCCCACCGTCGAGGGATCTCGCACGGCCATTGGCGCACTCTTC
TCTGGTCCACCGCTTCACGCCAACAGCCTTGGCGCCGGCGGCGGCAGCGGTGGGACTGCT
TCTGGCCTTGACGTGCTCACTGATGAGGAGATACGGTCACACCCAGCGTATCTGTCGTAC
TACTATTCTAATGAGCACCTCAACCCAAGGCTTCCGCCACCAATGGTTTCCAAAGAGGAC
TGGCGTGCAGCGCAGTGGTTCCAGGCTGTGTCTGGAGGTATTGGGGATAGGAGGAGGAGG
CCTGCGGAGGTCGGGAGTGGAAACTCCCTGTTCTCGGTGCAGCCAGGGGCAAACGAGGTT
GGTGGAGAGAAGGCGCTGCTGAGTGATAGAATGGAGAGGAGTGGAAGGAATGGGCTCGCA
CGACAGCAGTCTTCAGAGTGGCTTGGGAGAGGCTCCGATGGGCTCATCGGCTTGTCAGAT
GCCAGTGCCCTTGGGTCTCCGCGCAAGAGCTTTGCTGATGCATTGCAGGAAAATATTAGC
CGTCCTGCTGTTATAGCCGGTCATCTTTCACGTTCTAATAGCCGTAATGTTCTTGAGGGC
CCAACTCCAATCAGGTCATCTGATTCACGCAAGCCACAACTGCAGAATAGGTCAGAATCC
ATGAATGGCCTGCGATCTGGATCCACTTCACCGAGTCTGGTCAGGGTCCAAAGTCTTGGT
TCTTCGATGTCTCATACCTTCGCTTCTGCTGTTGGTTCATCTATCTCAAGAAGCACCACC
CCTGACCCCCAGCTGATACGGAGAACTCCTAGTCCTTGCCTTCCTCCAGTTGGAGTTCGG
ATGGGGAGTTCTGATAAAAAAGTTGAAGCTTCTGTTTCTTCACTTAATCATGATGGTGCT
GACATTGTGGCAACTCTGTCTAGCTTAAGCCTATCTGGAAATAAGATGTCGAATGTGGAA
AATGAAGTTCAGACTCATGCTTACCAGAACTTTGGTGATCAGGCTGATGTGTTGTTTAAT
GTACCAAAGGAACATAGGCAATTTTCACCACGGAATTTAACTCAAAAAACTGATGAAGAC
TTGCTTAATGCCCCTGAATATGCAGTTTTCCCAAATGGGGGGAGTAACTTCAGTAATTTG
CATGCTAGTAAGGTGGCATCTCATAGCAATAGCAAGTTCCCTATGCAATCACCACACGGT
AATGCCAACAAGAAAGGATCTTTGATGAGCTCAGCTGGATCAGTTTCTCAGTACCAGCAC
TTGAATGGTGATAGCCATGACATTGATGTATCTGGATGGCATACTCATACAGGTGGTTTT
ACTTCATCCATGCTGAACAATCAACTGAATCCTGATGGTGACTATGGCAATGTTCTTTCG
AATCATGGTGGATCGAGTTATCAGGGCCAACCAACAGAGACGATGTACGCACAATGCTTG
CAGGCAAACCCTGATTCACCCCTTGGCGCAGCTGCAAGCATGAGCCCTTTCCAAGGGAGG
GGTTTTACTGGTTCAGGACACTTGGATAGTCCTGGATACCAAAAAGCTTACCTTGGGTCA
TTATTTGGCCAGCAAAAGCTACAATATGGGATGCCATACCTGGGCAATTCTGGTGCTCTT
AATCAAAATATCTATGGCAATGATTCTGCCTTTGGCATTGGAATGACTTATCTAACAAGC
CCGCCATCTACTCCATATATCTCATCTCCCCAAGGCCATGTTGGGCAAGGAAACCGTCTG
ACTCGACTTCCAGCAGTGGTGAGGAACACCGCTGGAGGATCCATGGGATCGTGGAATTCA
GAGAATGGTCTGATGGATAATGGTTATGGGTCCTCCTTGCTGGAGGAATTCAAAAGTAAC
AAAACTAGATCTTTTGAGCTGTTAGATATTGTAGGCCATGTGGTAGAGTTCAGTTCGGAT
CAGTATGGGAGTCGCTTTATACAGCAGAAACTAGAAACTGCTTCTACTGAACAGAAGAAT
ATGATTTTTCCTGAGATCCTTCCCCAGGCACGTACTTTGATGACTGATGTTTTTGGAAAC
TATGTTATACAGAAGTTCTTTGAATACGGAACTGAAACGCAAACGAAGCAACTGGCAACC
CTGCTTAAGGGTTTTGTGTTACAGCTGAGTCTTCAAATGTATGGCTGCCGGGTGATTCAG
AAGGCTTTGGAAGTTGTTGAAGTGGAACAACAAACACAAATGGCTTTGGAGCTTGATGGA
TCTATCATGAGATGTGTTCGTGATCAGAATGGCAACCATGTCATCCAAAAATGTATAGAA
TGCATCCCTCAGGAGAGGATACGATTTATCATTTCTGCATTTTACGGACATGTCGTGGAG
CTTTCTATGCATCCTTATGGTTGTCGTGTTATTCAGAGGATCTTGGAGCATTGTGACGAT
GAAAGCACTCAAAATGCCATGATGGAAGAGATCATGCAGTCCGTGGTTACTTTAACGGAG
GACCAGTATGGTAATTATGTAATCCAGCATGTCCTGCAATATGGGAAACCAGAAGAGCGT
TCTACTATAATTGCACAACTCGCTGGACAGATAGTGAAGATGAGCCAGCAGAAATTTGCA
TCCAATGTTGTTGAGAAGTGTCTTACTTTTGGTTCTCCTGAGCAACGGCAGATTCTAATC
AATGAAATGCTTGGCACAACTGATGAGAACGAGCCGTTACAGGCAATGATGAAAGACCAG
TTCGCAAACTATGTTGTGCAGAAGGTTCTGGAGACATGTGATGACCAGAACCGTGAATTG
ATTCTTTCCCGTATCAAGGTCCACTTGAATGCACTGAAAAGGTACACCTATGGGAAGCAT
ATTGTGACACGTGTTGAGAAGCTTATTGCCGCAGGAGAACGGCGCATTGGCGCACTACCC
TCCTGCTGA

Peptide Sequence

PEP ID

Zm00001d051902_P008
PEP Infomation

pep chromosome:B73_RefGen_v4:4:173988559:173993609:-1 gene:Zm00001d051902 transcript:Zm00001d051902_T008 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pumilio homolog 4
Sequence

MAPSQAAAAAGPTFEDLERDLQAVLMDQNHMSPVDDLGMFRSGSAPPTVEGSRTAIGALF
SGPPLHANSLGAGGGSGGTASGLDVLTDEEIRSHPAYLSYYYSNEHLNPRLPPPMVSKED
WRAAQWFQAVSGGIGDRRRRPAEVGSGNSLFSVQPGANEVGGEKALLSDRMERSGRNGLA
RQQSSEWLGRGSDGLIGLSDASALGSPRKSFADALQENISRPAVIAGHLSRSNSRNVLEG
PTPIRSSDSRKPQLQNRSESMNGLRSGSTSPSLVRVQSLGSSMSHTFASAVGSSISRSTT
PDPQLIRRTPSPCLPPVGVRMGSSDKKVEASVSSLNHDGADIVATLSSLSLSGNKMSNVE
NEVQTHAYQNFGDQADVLFNVPKEHRQFSPRNLTQKTDEDLLNAPEYAVFPNGGSNFSNL
HASKVASHSNSKFPMQSPHGNANKKGSLMSSAGSVSQYQHLNGDSHDIDVSGWHTHTGGF
TSSMLNNQLNPDGDYGNVLSNHGGSSYQGQPTETMYAQCLQANPDSPLGAAASMSPFQGR
GFTGSGHLDSPGYQKAYLGSLFGQQKLQYGMPYLGNSGALNQNIYGNDSAFGIGMTYLTS
PPSTPYISSPQGHVGQGNRLTRLPAVVRNTAGGSMGSWNSENGLMDNGYGSSLLEEFKSN
KTRSFELLDIVGHVVEFSSDQYGSRFIQQKLETASTEQKNMIFPEILPQARTLMTDVFGN
YVIQKFFEYGTETQTKQLATLLKGFVLQLSLQMYGCRVIQKALEVVEVEQQTQMALELDG
SIMRCVRDQNGNHVIQKCIECIPQERIRFIISAFYGHVVELSMHPYGCRVIQRILEHCDD
ESTQNAMMEEIMQSVVTLTEDQYGNYVIQHVLQYGKPEERSTIIAQLAGQIVKMSQQKFA
SNVVEKCLTFGSPEQRQILINEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQNREL
ILSRIKVHLNALKRYTYGKHIVTRVEKLIAAGERRIGALPSC

Transcript Sequence

Transcript ID

Zm00001d051902_T008
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:173988559:173993609:-1 gene:Zm00001d051902 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pumilio homolog 4
Sequence

AGGGAAACCAAGAAGGAAGGAAGGAGATTGGAATAAAGACAGGCACTGCAACGATGGCTC
CATCTCAAGCGGCGGCAGCGGCTGGCCCCACCTTTGAGGACCTCGAGCGCGACCTGCAGG
CAGTTCTCATGGACCAAAACCACATGTCCCCAGTGGACGACCTCGGCATGTTTCGCAGCG
GCAGCGCTCCCCCCACCGTCGAGGGATCTCGCACGGCCATTGGCGCACTCTTCTCTGGTC
CACCGCTTCACGCCAACAGCCTTGGCGCCGGCGGCGGCAGCGGTGGGACTGCTTCTGGCC
TTGACGTGCTCACTGATGAGGAGATACGGTCACACCCAGCGTATCTGTCGTACTACTATT
CTAATGAGCACCTCAACCCAAGGCTTCCGCCACCAATGGTTTCCAAAGAGGACTGGCGTG
CAGCGCAGTGGTTCCAGGCTGTGTCTGGAGGTATTGGGGATAGGAGGAGGAGGCCTGCGG
AGGTCGGGAGTGGAAACTCCCTGTTCTCGGTGCAGCCAGGGGCAAACGAGGTTGGTGGAG
AGAAGGCGCTGCTGAGTGATAGAATGGAGAGGAGTGGAAGGAATGGGCTCGCACGACAGC
AGTCTTCAGAGTGGCTTGGGAGAGGCTCCGATGGGCTCATCGGCTTGTCAGATGCCAGTG
CCCTTGGGTCTCCGCGCAAGAGCTTTGCTGATGCATTGCAGGAAAATATTAGCCGTCCTG
CTGTTATAGCCGGTCATCTTTCACGTTCTAATAGCCGTAATGTTCTTGAGGGCCCAACTC
CAATCAGGTCATCTGATTCACGCAAGCCACAACTGCAGAATAGGTCAGAATCCATGAATG
GCCTGCGATCTGGATCCACTTCACCGAGTCTGGTCAGGGTCCAAAGTCTTGGTTCTTCGA
TGTCTCATACCTTCGCTTCTGCTGTTGGTTCATCTATCTCAAGAAGCACCACCCCTGACC
CCCAGCTGATACGGAGAACTCCTAGTCCTTGCCTTCCTCCAGTTGGAGTTCGGATGGGGA
GTTCTGATAAAAAAGTTGAAGCTTCTGTTTCTTCACTTAATCATGATGGTGCTGACATTG
TGGCAACTCTGTCTAGCTTAAGCCTATCTGGAAATAAGATGTCGAATGTGGAAAATGAAG
TTCAGACTCATGCTTACCAGAACTTTGGTGATCAGGCTGATGTGTTGTTTAATGTACCAA
AGGAACATAGGCAATTTTCACCACGGAATTTAACTCAAAAAACTGATGAAGACTTGCTTA
ATGCCCCTGAATATGCAGTTTTCCCAAATGGGGGGAGTAACTTCAGTAATTTGCATGCTA
GTAAGGTGGCATCTCATAGCAATAGCAAGTTCCCTATGCAATCACCACACGGTAATGCCA
ACAAGAAAGGATCTTTGATGAGCTCAGCTGGATCAGTTTCTCAGTACCAGCACTTGAATG
GTGATAGCCATGACATTGATGTATCTGGATGGCATACTCATACAGGTGGTTTTACTTCAT
CCATGCTGAACAATCAACTGAATCCTGATGGTGACTATGGCAATGTTCTTTCGAATCATG
GTGGATCGAGTTATCAGGGCCAACCAACAGAGACGATGTACGCACAATGCTTGCAGGCAA
ACCCTGATTCACCCCTTGGCGCAGCTGCAAGCATGAGCCCTTTCCAAGGGAGGGGTTTTA
CTGGTTCAGGACACTTGGATAGTCCTGGATACCAAAAAGCTTACCTTGGGTCATTATTTG
GCCAGCAAAAGCTACAATATGGGATGCCATACCTGGGCAATTCTGGTGCTCTTAATCAAA
ATATCTATGGCAATGATTCTGCCTTTGGCATTGGAATGACTTATCTAACAAGCCCGCCAT
CTACTCCATATATCTCATCTCCCCAAGGCCATGTTGGGCAAGGAAACCGTCTGACTCGAC
TTCCAGCAGTGGTGAGGAACACCGCTGGAGGATCCATGGGATCGTGGAATTCAGAGAATG
GTCTGATGGATAATGGTTATGGGTCCTCCTTGCTGGAGGAATTCAAAAGTAACAAAACTA
GATCTTTTGAGCTGTTAGATATTGTAGGCCATGTGGTAGAGTTCAGTTCGGATCAGTATG
GGAGTCGCTTTATACAGCAGAAACTAGAAACTGCTTCTACTGAACAGAAGAATATGATTT
TTCCTGAGATCCTTCCCCAGGCACGTACTTTGATGACTGATGTTTTTGGAAACTATGTTA
TACAGAAGTTCTTTGAATACGGAACTGAAACGCAAACGAAGCAACTGGCAACCCTGCTTA
AGGGTTTTGTGTTACAGCTGAGTCTTCAAATGTATGGCTGCCGGGTGATTCAGAAGGCTT
TGGAAGTTGTTGAAGTGGAACAACAAACACAAATGGCTTTGGAGCTTGATGGATCTATCA
TGAGATGTGTTCGTGATCAGAATGGCAACCATGTCATCCAAAAATGTATAGAATGCATCC
CTCAGGAGAGGATACGATTTATCATTTCTGCATTTTACGGACATGTCGTGGAGCTTTCTA
TGCATCCTTATGGTTGTCGTGTTATTCAGAGGATCTTGGAGCATTGTGACGATGAAAGCA
CTCAAAATGCCATGATGGAAGAGATCATGCAGTCCGTGGTTACTTTAACGGAGGACCAGT
ATGGTAATTATGTAATCCAGCATGTCCTGCAATATGGGAAACCAGAAGAGCGTTCTACTA
TAATTGCACAACTCGCTGGACAGATAGTGAAGATGAGCCAGCAGAAATTTGCATCCAATG
TTGTTGAGAAGTGTCTTACTTTTGGTTCTCCTGAGCAACGGCAGATTCTAATCAATGAAA
TGCTTGGCACAACTGATGAGAACGAGCCGTTACAGGCAATGATGAAAGACCAGTTCGCAA
ACTATGTTGTGCAGAAGGTTCTGGAGACATGTGATGACCAGAACCGTGAATTGATTCTTT
CCCGTATCAAGGTCCACTTGAATGCACTGAAAAGGTACACCTATGGGAAGCATATTGTGA
CACGTGTTGAGAAGCTTATTGCCGCAGGAGAACGGCGCATTGGCGCACTACCCTCCTGCT
GAGATGGCAATGGTTAGGTCACCTGTACAGCAGAAGATAGCGAGGCCTAGCTTTTTACCA
TTACCAGTAGTCGTTAATATTGAGCAAGTACAACCGCAGAAGTTAAAAAAGAAAGGCTCC
CAAATCCTTTGTAAATAAAGGAGAGCCTCTGGAAATAAATAAGAATGAGAAAAGATGAGA
TTTTACTTGTCCTCGAGGAAAGACTTGTATATTTGTATTGTTTTTCCCCCCTCTTGCAAG
CAGCAGGATAAAGAAGTTTTAAATATTTTGTCGAGAAGCAAAGCAGTTACTAGAAGGATA
AAGGTTTTAGGATCATAGATGATGGGAAGGACTGCTGTAGATTCTCCTTTTTTCCTTGGG
TTTCATCAGTCAGTGTATAAGTACTAATGTCCATGCTGATGTTAATCTCTGTAAGACTGC
CTTCAGTTTACTGAATCTTTTTTTTCTCT