Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d051894_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:173865361:173866293:-1 gene:Zm00001d051894 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-H2 finger protein ATL16
Sequence	ATGGACGCGGGCCGGGGCAGCAGCGCCACCATCTTCCCGGTGCCGCAGGTCCCGGCGCTA GCTCTGCTCTTCCCCCCGCCGCCGCCGGCGGCGGCGGCATTGCCATCTTCTTCCCTCTCC CTTTCCTCCTCCTCCTCCTCGCGCCACGCGCCATCCATCACCAGCTTCCCGATCCTCGTG CTCACGGTGCTGGGCATCCTCGCCGCCTGCGTCCTCATCCTTGCCTACTACGTCTTCGTC ATCCGCTGCTGCCTCACCTGGCACCGCGACCGTAGCGCGTCCGACGCCGTCTCCCGCCGC CCCCAGCGCGCCCGCGCCCGCGTCCGCACCAGCACTGGCGGCACCCCGGCCTCCAGCGCC GAGCCGCGCGGCCTCGAGGACGCCGTCATCCGGGCGCTGCCGGCGTTCAGTTACAGGAAG AAGCCCGCCGACTTACCGCCGTCCGCACCCGCGCCCGCGAGCGAGTGCGCGGTGTGCCTC GGCGAGTTCGAGGAGGGAGACAGCGTGAGGATGCTGCCCGCCTGCCTCCACGTCTTCCAC GTCGGCTGCGTCGACGCCTGGCTCCAGGGCAACGCCAGCTGCCCGCTCTGCAGGGCCAGG GCGGACGTCGATGCCGCCAGCTGCTGCCGCCTGCTCCCGCCGCCGCCACCCGAGGAGGAG GAGGACGTAGCGGCCATCCAGGTCGTCGTCGTCGTCCCCGGCGCAGAGGAAGACGACCGC CAAGGCACGGTGCCACAGCGGCAGCGAGAAACCACCGTGGCTCCTGCTGCTGCTGCCGAG GTTGAAGGAGAAGATCCTCCTCAGGTCGGTGGTGAAAAGGAGAGGAGGAAGGATGGAGAT GTTGCACCGAGGACGAGGTCCTTCTCCACGGACGGTGACGGTGGCGAGGAGGTTCAGAGC ATCTTGCAGAGGAACGGACAGGGACTCCCGTAG

Peptide Sequence

PEP ID	Zm00001d051894_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:173865361:173866293:-1 gene:Zm00001d051894 transcript:Zm00001d051894_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-H2 finger protein ATL16
Sequence	MDAGRGSSATIFPVPQVPALALLFPPPPPAAAALPSSSLSLSSSSSSRHAPSITSFPILV LTVLGILAACVLILAYYVFVIRCCLTWHRDRSASDAVSRRPQRARARVRTSTGGTPASSA EPRGLEDAVIRALPAFSYRKKPADLPPSAPAPASECAVCLGEFEEGDSVRMLPACLHVFH VGCVDAWLQGNASCPLCRARADVDAASCCRLLPPPPPEEEEDVAAIQVVVVVPGAEEDDR QGTVPQRQRETTVAPAAAAEVEGEDPPQVGGEKERRKDGDVAPRTRSFSTDGDGGEEVQS ILQRNGQGLP

Transcript Sequence

Transcript ID	Zm00001d051894_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:173865361:173866293:-1 gene:Zm00001d051894 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-H2 finger protein ATL16
Sequence	ATGGACGCGGGCCGGGGCAGCAGCGCCACCATCTTCCCGGTGCCGCAGGTCCCGGCGCTA GCTCTGCTCTTCCCCCCGCCGCCGCCGGCGGCGGCGGCATTGCCATCTTCTTCCCTCTCC CTTTCCTCCTCCTCCTCCTCGCGCCACGCGCCATCCATCACCAGCTTCCCGATCCTCGTG CTCACGGTGCTGGGCATCCTCGCCGCCTGCGTCCTCATCCTTGCCTACTACGTCTTCGTC ATCCGCTGCTGCCTCACCTGGCACCGCGACCGTAGCGCGTCCGACGCCGTCTCCCGCCGC CCCCAGCGCGCCCGCGCCCGCGTCCGCACCAGCACTGGCGGCACCCCGGCCTCCAGCGCC GAGCCGCGCGGCCTCGAGGACGCCGTCATCCGGGCGCTGCCGGCGTTCAGTTACAGGAAG AAGCCCGCCGACTTACCGCCGTCCGCACCCGCGCCCGCGAGCGAGTGCGCGGTGTGCCTC GGCGAGTTCGAGGAGGGAGACAGCGTGAGGATGCTGCCCGCCTGCCTCCACGTCTTCCAC GTCGGCTGCGTCGACGCCTGGCTCCAGGGCAACGCCAGCTGCCCGCTCTGCAGGGCCAGG GCGGACGTCGATGCCGCCAGCTGCTGCCGCCTGCTCCCGCCGCCGCCACCCGAGGAGGAG GAGGACGTAGCGGCCATCCAGGTCGTCGTCGTCGTCCCCGGCGCAGAGGAAGACGACCGC CAAGGCACGGTGCCACAGCGGCAGCGAGAAACCACCGTGGCTCCTGCTGCTGCTGCCGAG GTTGAAGGAGAAGATCCTCCTCAGGTCGGTGGTGAAAAGGAGAGGAGGAAGGATGGAGAT GTTGCACCGAGGACGAGGTCCTTCTCCACGGACGGTGACGGTGGCGAGGAGGTTCAGAGC ATCTTGCAGAGGAACGGACAGGGACTCCCGTAG