Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d051885_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:4:173507646:173509486:-1 gene:Zm00001d051885 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATG8-interacting protein 1
Sequence	ATGGCTGTATTGTACTGTACTACCGCTTCAGTATTCGCAGGGAAGGAGAAGATGGAGCCT GGCCAGAGCGGGACTGAGCAGGCCTCTCCACGCGGGAACGATTGGGAGGTCGTGCAGCTC ACCGCGTCCGCATACGCCGCCGCGCCCGCTCCGAGGAAGCCCGAGCCCTCCGACGAAGCG GAAGCTAAGAGATACGGCGCAAAGGGGGACGATCTAGCCGCCGGCCTACTCATGTCCGGC CACTTCTCCGTGTCTCAGAGCGAGGTCGAGAGCCTCCTCGTAGGCGCCGACACCAAAGAA CCACCGCCCAAGGACAAGGAGGAGCCTTGCGAGCATACTAAGCTGCTGGAGGACGACGTC CCCACCATCCCGTTCGATGACGGCAAGGCGCTGAAAGGCATGGGTCTGGTCGGGGAAGAG CCGGCCGGGTTCTCGTCGCCTGTCTACAGCTCCATCACGGAGAGCAGGAGTGACAAGAGG AGCGAGGAGCCTACTACTCTGCATAGTTTCAACCCCGTGACTGGCTCAACAAAGGTCGTC TCACCTGACGAGCAGAGCGAGCCTGCTGCTGGGTCTGGGTCCGGGTCTGGGTCAGGCCCG CGTGAAGCGTGGTGGAAGAAGCAGCTTCTCTCCCTTTACAGGAACGCCAAGGAGAGCAAG CATCTCTGGCCTATCGTCGCCACCACTGCTGCTTTGGTGGGCCTGGCGTATCTGGGGCGG CGCTGGCATAAGGGCAGGCTGCAGTTTCAGCTGCTCAAGATATCGCCTTCTACCAACAAG GAGAAAATCAGCGACGCGGTTGGACCGTTAAACCGCATCAACGACATTCTCGTTGCTGGC AACCACCCAAGTCACGGTGTCCATGGGCATGCCCGTGCAGGCTGA

Peptide Sequence

PEP ID	Zm00001d051885_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:4:173507646:173509486:-1 gene:Zm00001d051885 transcript:Zm00001d051885_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATG8-interacting protein 1
Sequence	MAVLYCTTASVFAGKEKMEPGQSGTEQASPRGNDWEVVQLTASAYAAAPAPRKPEPSDEA EAKRYGAKGDDLAAGLLMSGHFSVSQSEVESLLVGADTKEPPPKDKEEPCEHTKLLEDDV PTIPFDDGKALKGMGLVGEEPAGFSSPVYSSITESRSDKRSEEPTTLHSFNPVTGSTKVV SPDEQSEPAAGSGSGSGSGPREAWWKKQLLSLYRNAKESKHLWPIVATTAALVGLAYLGR RWHKGRLQFQLLKISPSTNKEKISDAVGPLNRINDILVAGNHPSHGVHGHARAG

Transcript Sequence

Transcript ID	Zm00001d051885_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:173507646:173509486:-1 gene:Zm00001d051885 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATG8-interacting protein 1
Sequence	GCGTCTCTCCTCTCTTCCCCAATCAACCCGGCCTTATTAGGTTGATTGGTTAAGCAACTG GATGCGGCGCCCGATTGTTTTGATTTATTTAACCTTGCATATCGCAGCGCCCCCATGGAT CAATAATTTCCCTGATGGCTGTATTGTACTGTACTACCGCTTCAGTATTCGCAGGGAAGG AGAAGATGGAGCCTGGCCAGAGCGGGACTGAGCAGGCCTCTCCACGCGGGAACGATTGGG AGGTCGTGCAGCTCACCGCGTCCGCATACGCCGCCGCGCCCGCTCCGAGGAAGCCCGAGC CCTCCGACGAAGCGGAAGCTAAGAGATACGGCGCAAAGGGGGACGATCTAGCCGCCGGCC TACTCATGTCCGGCCACTTCTCCGTGTCTCAGAGCGAGGTCGAGAGCCTCCTCGTAGGCG CCGACACCAAAGAACCACCGCCCAAGGACAAGGAGGAGCCTTGCGAGCATACTAAGCTGC TGGAGGACGACGTCCCCACCATCCCGTTCGATGACGGCAAGGCGCTGAAAGGCATGGGTC TGGTCGGGGAAGAGCCGGCCGGGTTCTCGTCGCCTGTCTACAGCTCCATCACGGAGAGCA GGAGTGACAAGAGGAGCGAGGAGCCTACTACTCTGCATAGTTTCAACCCCGTGACTGGCT CAACAAAGGTCGTCTCACCTGACGAGCAGAGCGAGCCTGCTGCTGGGTCTGGGTCCGGGT CTGGGTCAGGCCCGCGTGAAGCGTGGTGGAAGAAGCAGCTTCTCTCCCTTTACAGGAACG CCAAGGAGAGCAAGCATCTCTGGCCTATCGTCGCCACCACTGCTGCTTTGGTGGGCCTGG CGTATCTGGGGCGGCGCTGGCATAAGGGCAGGCTGCAGTTTCAGCTGCTCAAGATATCGC CTTCTACCAACAAGGAGAAAATCAGCGACGCGGTTGGACCGTTAAACCGCATCAACGACA TTCTCGTTGCTGGCAACCACCCAAGTCACGGTGTCCATGGGCATGCCCGTGCAGGCTGAA TGCAGTCAGTTCGCGAACCCATCGGGCGTCCTGGACCCATATACTATCATGTGTCGCTTT GAGAATCGGCTCAAGACAAACCATCGGGCAGGACTGGAGTAGTTGTCCAAGGACTGAGGA TGTTTATGCAGACACAAGTATGTTTGGTGGCTCGATGTATGTGAATTCCAAAACTCCATC TGGGTATGTAAATATTTGTATGGGTTTAGTTTGGTTGCTTTTTCGTTTGGTCATCTCATG AAACCTCTGCTGGTGGTTTCCTTGTCTATATTACTGTCTTATTTGGGGTTCGTTCATGCA TGCATACATGTGATGGGGCATAATATCACTGGATTTTATT