Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d051884_T008
CDS Infomation	cds chromosome:B73_RefGen_v4:4:173453843:173458074:-1 gene:Zm00001d051884 gene_biotype:protein_coding transcript_biotype:protein_coding description:hydroxyproline-rich glycoprotein family protein
Sequence	ATGCAGAGTGGGGGCGACATGAGGCCTGTGCACAACAGTGTCGATACAGTTAACGCTGCT GCTGTTGCCATCGTCACCGCGGAGAGCCGCACACAGCCTCCTGCTGAACAGAGAAGGAAA TGGGCTGACCGGTTGAGCGTGTACTTCTGCTTTGGATCACAGAAGAATGGCCGGCGCATG CGTGTCAACCATGCCGCACTTGTCCCAGAACCTGCACCTCAAAGGACAGATGCGCCTGCA GCAGAAATTCCAAACCACCCACCGCCTCCTGTGTTCCCCTTTGTGGCACCGCCATCCTCT CCTGCTTCTTTCCTTCAATCAGAACCCACATCAATCGTACAATCACCAAGGGCTGGAGCT CCAGCTTTTTCGCCCCTCTCACCAAATTCCCAATCCCCGACGGGGCCACCATCCATCTTT GCTATTGGGCCGTATGCACATGAGACACAACTCGTCTCGCCTCCAGTGTTCTCGGCCTTC ACAACTGAACCATCAACTGCCCCTTTCACTCCTCCTCCGGAGTCTGTCCATCTGACAACC CCTTCCTCTCCAGAGGTCCCATATGCAAAGCTTCTGACATCGATCAACAATAGCAAGAAT GGTGAAGCAGGGGGTGATCTCCAGTCGTATCCAAACTACCCAGACAGCCCAATTGGGCGC CTGATATCTCCAAGCTCGGGCTGTTCTGGCACATCCTCCCCATTCCCTGACCCTGAGATG CAGGCTTCTTCACGCAGCGCTTTACGCTTGTTCCCAGTTCGTGAGCCCCCTAAGATATTG GATGGCGAGGGCGTTGCGACACAGAAGTTGATACCTCGCCATATGCGCAACGGTGGGTCC CTCTTGGATGGCCAGATCTCAGCAGCTGTACCAGTTGTGGACTTCTCTGCCCGACTTCAA CCCAACGAGCACGCAATGGATCACCGGGTGTCATTCGAGTTGACCGTCGAAGATGTCGCG CGCTGCCTTGAGAAGAAGACTGCAATCTCCGGGGATTCTGGCACGGCATCATTCCACCTT GCACCGACCGGCAGCGGCGACCACCACAGAGAATCCAACGAGGCAAGGGCAGGGCTCTAC GTCGACGAATCATACCATGACTTGCCCGAGAAAGCGAGGCGGTCCCTGTCCCTGCGCCTG GCCAAAGAGTTCAATTTCAACAACGTCGACGTCGGTAGCGTGGAGCCGAGCGTGGGATCC GACTGGTGGGCGAACGAGAAAGTCGCCGGGATGACAACTGAGCCAAAAAAGAACTGGTCT TTCCACCCGGTGGTGCAGCCTGGGGTCAGCTAA

Peptide Sequence

PEP ID	Zm00001d051884_P008
PEP Infomation	pep chromosome:B73_RefGen_v4:4:173453843:173458074:-1 gene:Zm00001d051884 transcript:Zm00001d051884_T008 gene_biotype:protein_coding transcript_biotype:protein_coding description:hydroxyproline-rich glycoprotein family protein
Sequence	MQSGGDMRPVHNSVDTVNAAAVAIVTAESRTQPPAEQRRKWADRLSVYFCFGSQKNGRRM RVNHAALVPEPAPQRTDAPAAEIPNHPPPPVFPFVAPPSSPASFLQSEPTSIVQSPRAGA PAFSPLSPNSQSPTGPPSIFAIGPYAHETQLVSPPVFSAFTTEPSTAPFTPPPESVHLTT PSSPEVPYAKLLTSINNSKNGEAGGDLQSYPNYPDSPIGRLISPSSGCSGTSSPFPDPEM QASSRSALRLFPVREPPKILDGEGVATQKLIPRHMRNGGSLLDGQISAAVPVVDFSARLQ PNEHAMDHRVSFELTVEDVARCLEKKTAISGDSGTASFHLAPTGSGDHHRESNEARAGLY VDESYHDLPEKARRSLSLRLAKEFNFNNVDVGSVEPSVGSDWWANEKVAGMTTEPKKNWS FHPVVQPGVS

Transcript Sequence

Transcript ID	Zm00001d051884_T008
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:173453843:173458074:-1 gene:Zm00001d051884 gene_biotype:protein_coding transcript_biotype:protein_coding description:hydroxyproline-rich glycoprotein family protein
Sequence	ATTCCATCACCCCCAGCGTGCGCGCTGCACTCCCTCCCTGCCCCTGTTCTCTCTCTCGTG GCGACGGCGACGGCGACGACTGGGCGGCCGTTGCTGCCGCCCTACTCGCCAGGCGCCCAG GTATTCTTCGGCCCCTTCGCCGGCGACGAGTGTCACCAGGTACGCCCACTCCCCTTGGTC TTCCCTTTCTGCCGTGCGAAACCGAGCATCCAAACCCTAACGGACTGTTTTTACCCGGAT CTGATCCAACCACTACTGTATATGCATGAATTTTGCCTACTAGCTTCGATCGCGTTGCAA AAAATATCGGGCGATGCCCTTAACCGGCTCCTCGCCTGTGTGCGGGAACCCTACCGATCG GAATTCTGCTAACTCTGTCCATCCATGGTTCGATTAGGTTCCTCGTCTCCGGAACGCAGT GCAAAGCAGATCGATCTCGGCCCAGCAGGGGCCTCACGACTTGACTCCCAAGGCTGACTC GATCTCTTTGGTTTCGTGGACCGTGATCAGACTCCAGGGCTGGATCGTGTTTCTTCCAGT GTGCAAGCTTGGATCTCGTAGGTCTGGTTTAGAAAGGACCGTGCTTGCTCTTTGCTGCCG CAATCATGCAGAGTGGGGGCGACATGAGGCCTGTGCACAACAGTGTCGATACAGTTAACG CTGCTGCTGTTGCCATCGTCACCGCGGAGAGCCGCACACAGCCTCCTGCTGAACAGAGAA GGAAATGGGCTGACCGGTTGAGCGTGTACTTCTGCTTTGGATCACAGAAGAATGGCCGGC GCATGCGTGTCAACCATGCCGCACTTGTCCCAGAACCTGCACCTCAAAGGACAGATGCGC CTGCAGCAGAAATTCCAAACCACCCACCGCCTCCTGTGTTCCCCTTTGTGGCACCGCCAT CCTCTCCTGCTTCTTTCCTTCAATCAGAACCCACATCAATCGTACAATCACCAAGGGCTG GAGCTCCAGCTTTTTCGCCCCTCTCACCAAATTCCCAATCCCCGACGGGGCCACCATCCA TCTTTGCTATTGGGCCGTATGCACATGAGACACAACTCGTCTCGCCTCCAGTGTTCTCGG CCTTCACAACTGAACCATCAACTGCCCCTTTCACTCCTCCTCCGGAGTCTGTCCATCTGA CAACCCCTTCCTCTCCAGAGGTCCCATATGCAAAGCTTCTGACATCGATCAACAATAGCA AGAATGGTGAAGCAGGGGGTGATCTCCAGTCGTATCCAAACTACCCAGACAGCCCAATTG GGCGCCTGATATCTCCAAGCTCGGGCTGTTCTGGCACATCCTCCCCATTCCCTGACCCTG AGATGCAGGCTTCTTCACGCAGCGCTTTACGCTTGTTCCCAGTTCGTGAGCCCCCTAAGA TATTGGATGGCGAGGGCGTTGCGACACAGAAGTTGATACCTCGCCATATGCGCAACGGTG GGTCCCTCTTGGATGGCCAGATCTCAGCAGCTGTACCAGTTGTGGACTTCTCTGCCCGAC TTCAACCCAACGAGCACGCAATGGATCACCGGGTGTCATTCGAGTTGACCGTCGAAGATG TCGCGCGCTGCCTTGAGAAGAAGACTGCAATCTCCGGGGATTCTGGCACGGCATCATTCC ACCTTGCACCGACCGGCAGCGGCGACCACCACAGAGAATCCAACGAGGCAAGGGCAGGGC TCTACGTCGACGAATCATACCATGACTTGCCCGAGAAAGCGAGGCGGTCCCTGTCCCTGC GCCTGGCCAAAGAGTTCAATTTCAACAACGTCGACGTCGGTAGCGTGGAGCCGAGCGTGG GATCCGACTGGTGGGCGAACGAGAAAGTCGCCGGGATGACAACTGAGCCAAAAAAGAACT GGTCTTTCCACCCGGTGGTGCAGCCTGGGGTCAGCTAACCTTTGCACTGACCATAATGAT CTTATACAGGGATGAAGGAATTAGCTTCTTCTGCTTCTGCTTCTGCTTCAGTGGTCGATT CCTTAGGGATGACTTGCCAGCTTGTTCTAAACATGCAGCTAGTGGTAAGTTCTGGATTTA GATAGTAATAAGTAATGGGGTGTCCACCGTCTAATATCGTCATGGGATACTAAAGGTTTT TATTCTGGGAGATGTGACAAACCGCAAACTCTTTGGTTAGGGGTCGGTCGGAACTGTCCT GTTCGTCTGTTTTATCCTGATACCGGTGCTGTGTTGTGTATGTACATAATGAAGTAGTTT TTTTTAAAAAAAGTCAATTAAAAGG