Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d051872_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:172964877:172966249:-1 gene:Zm00001d051872 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plasma membrane intrinsic protein1 description:Aquaporin PIP1-5
Sequence	ATGGAGGGCAAGGAGGAGGACGTTCGCCTGGGCGCCAACCGCTACTCGGAGCGCCAGCCA ATCGGCACGGCGGCGCAGGGCACGGAGGAGAAGGACTACAAGGAGCCTCCGCCGGCGCCG CTGTTCGAGGCGGAGGAGCTGACGTCGTGGTCCTTCTACCGGGCCGGGATCGCCGAGTTC GTGGCCACCTTCCTGTTCCTGTACATCAGCATCCTGACTGTGATGGGCGTGAGCAAGTCG TCCAGCAAGTGCGCCACCGTGGGCATCCAGGGCATCGCGTGGTCCTTCGGCGGCATGATC TTCGCGCTGGTGTACTGCACGGCGGGCATCTCCGGCGGCCACATCAACCCGGCCGTCACC TTCGGCCTCTTCCTGGCGCGGAAGCTGTCGCTCACGCGCGCGCTCTTCTACATGGTCATG CAGTGCCTGGGCGCCATCTGCGGCGCCGGCGTCGTCAAGGGCTTCCAGGAGGGCCTCTAC ATGGGCGCCGGCGGCGGCGCCAACGCCGTCAACCCCGGGTACACCAAGGGCGACGGGCTC GGGGCGGAGATCGTCGGCACCTTCGTGCTCGTCTACACCGTCTTCTCCGCCACCGACGCC AAGCGCAGCGCCCGCGACTCCCACGTGCCCATCCTCGCGCCGCTCCCCATAGGCTTCGCC GTCTTCCTCGTGCACCTGGCGACCATCCCCATCACCGGCACCGGCATCAACCCCGCGCGC AGCCTCGGCGCCGCCATCGTCTACAACAGGTCCCACGCATGGAACGACCACTGGATCTTC TGGGTTGGCCCCTTCATCGGTGCTGCTCTTGCCGCCATCTACCACGTGGTCATCATCAGG GCCCTCCCCTTCAAGAGCCGTGACTGA

Peptide Sequence

PEP ID	Zm00001d051872_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:172964877:172966249:-1 gene:Zm00001d051872 transcript:Zm00001d051872_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plasma membrane intrinsic protein1 description:Aquaporin PIP1-5
Sequence	MEGKEEDVRLGANRYSERQPIGTAAQGTEEKDYKEPPPAPLFEAEELTSWSFYRAGIAEF VATFLFLYISILTVMGVSKSSSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVT FGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFQEGLYMGAGGGANAVNPGYTKGDGL GAEIVGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPAR SLGAAIVYNRSHAWNDHWIFWVGPFIGAALAAIYHVVIIRALPFKSRD

Transcript Sequence

Transcript ID	Zm00001d051872_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:172964877:172966249:-1 gene:Zm00001d051872 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plasma membrane intrinsic protein1 description:Aquaporin PIP1-5
Sequence	GGCGGGGGAATTAATAGATGGAGGGCAAGGAGGAGGACGTTCGCCTGGGCGCCAACCGCT ACTCGGAGCGCCAGCCAATCGGCACGGCGGCGCAGGGCACGGAGGAGAAGGACTACAAGG AGCCTCCGCCGGCGCCGCTGTTCGAGGCGGAGGAGCTGACGTCGTGGTCCTTCTACCGGG CCGGGATCGCCGAGTTCGTGGCCACCTTCCTGTTCCTGTACATCAGCATCCTGACTGTGA TGGGCGTGAGCAAGTCGTCCAGCAAGTGCGCCACCGTGGGCATCCAGGGCATCGCGTGGT CCTTCGGCGGCATGATCTTCGCGCTGGTGTACTGCACGGCGGGCATCTCCGGCGGCCACA TCAACCCGGCCGTCACCTTCGGCCTCTTCCTGGCGCGGAAGCTGTCGCTCACGCGCGCGC TCTTCTACATGGTCATGCAGTGCCTGGGCGCCATCTGCGGCGCCGGCGTCGTCAAGGGCT TCCAGGAGGGCCTCTACATGGGCGCCGGCGGCGGCGCCAACGCCGTCAACCCCGGGTACA CCAAGGGCGACGGGCTCGGGGCGGAGATCGTCGGCACCTTCGTGCTCGTCTACACCGTCT TCTCCGCCACCGACGCCAAGCGCAGCGCCCGCGACTCCCACGTGCCCATCCTCGCGCCGC TCCCCATAGGCTTCGCCGTCTTCCTCGTGCACCTGGCGACCATCCCCATCACCGGCACCG GCATCAACCCCGCGCGCAGCCTCGGCGCCGCCATCGTCTACAACAGGTCCCACGCATGGA ACGACCACTGGATCTTCTGGGTTGGCCCCTTCATCGGTGCTGCTCTTGCCGCCATCTACC ACGTGGTCATCATCAGGGCCCTCCCCTTCAAGAGCCGTGACTGATTATACGTACATTGTT TATTACCAACAGCAACCATGCAGCATACGAATCATCGTTATTAAGCTATATATGTATAAT ATCCAGCATGTCTTGTTAATTACTAGTATATGTGCTAGTAAGTGGTGCGTGCTCGCTCTT CCATCGCTGTCGTCGTCTCATCTGCTATTGTTCGTCATATATATATGTCCATGTGAGCTA GCTAGTGTGTATCACGCGCGGAGGCCAGTTCAGCTAGCCATCAGTCTGCAATGCACTTTG TGACTTCTCTGTTTAGTCCTCTCTCGCTTGGGTTTTGGTACGGTGAAGTATATAAACTAA GCATGCATATGTGTAAAAATTCAAATTCAAGTGTATGCATGCATGCCAATAATGAAAGTT AAGAAGAAGACTCCCTGTTT