Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d051866_T031
CDS Infomation	cds chromosome:B73_RefGen_v4:4:172761796:172766959:-1 gene:Zm00001d051866 gene_biotype:protein_coding transcript_biotype:protein_coding description:DUF2146 family protein
Sequence	ATGGAGCCGCCTTCGCCTCCGGCGACCCACTCCGCGGCCGTCCGTGTCCTCTCCCGCACT CCTCCGCCGACCTCCCCGAACCCCTCCTCCACGGGCCCGGCGGCCCCGTCGCCCGCCTCC CGCGACGGGGTCGTCGCCGTCGGCTTCGTGGGCGCCGCGGGGACCGCCCGCCTCGCGGAC CGGATCCTCGACGCCCACGTCTTCTCTCCCGGTGGCTCGGCGGGGAGCCTCGCGGGAAGG GTAAGGTACCACCGCGACGCCGGCAAGAGGATGGTGTTCCTTCACCTCACGCCGCCGCCG CCCGCGCCGCTCGAGGCGGTGGCAGGATGCTGCGATGACGGCGAACTACCGGAGATGCTC TTCATGTTCTCTGTCTGCCACGTAATTATATTTCTGCAACAAGGCTTCAGATTTAACACA CAAACCTTAAAGAAGTTCCGACTGCTGCAATCTTCAAAGCATGCTCTCGCTCCATTTGTC AAGCCATTGGTGGCAGCTGCAATGCCTGCCAGAACTGTTGCCTCTGACACCCCAACAAGA GCAACCCACAGGGCTTCTTCCGTCTCCCCTCCAACACGCCGAGGAGGTCACGCTGGGCGT CAGTCCTCGGCTATCTCACTTATGTCTGGAACCAGTTCAACTCCTTCTGTCTTGCCAGGC CAATGCATTCCTGTATTGCTCTTTGTCTTTGAGGATGATGCGGTTGATGTTTCAAGTGCT GCAGCAAGTCCCGATGATATAGGTGATGCATCTTCATCAAATCAGGGTTCTACCCCTGAT GGACTACCAAAACAGAGCTTAGCTTCAAAAAGTTCTGGTTCAGTAATTATGCTTTCCCGG GCAGCAAACAAATCTGAGGGCAGTTCAGGCAAAAAACTGCATTCGTCACTGGAGGGACAG ATCCGTGTCTTGATCAAGAAGTGCAGGGTGCTTGCAGGCATGGAGCCTGGACATATTGGC CCAAGGGGCGTAAGTAACATGAGTCATCATTTACCCCTGTTCTCACTCGATACCTCGAGG GTAGTTGCACTGTTGGAACGGTATATTAATAAGAAACAGGAACCACTGGACACCATTGCA GGACTATTTGAAGATTCTTTGTGCTCCAAATCGCCATTGGATATTCTTTCGCTCGAAAAC AACTACCATCCAACAAACCATGATGACTTTCAGTTGATCAAGGATTTTATATTTCGGCAG TCTGATGCGCTGAGAGGGAAAGGGGGATATTCAAGCAATGCAAGTGCCGGGTCTGTTGCA GGTGTTGGCATGGTGGCTGCTGCTGCTGCAGCAGCTGCAGCATCAGCTGCATCTGGGAAA CCAGTTAATGCACCTGACCTCCCTACTTTTGATAAATGGTTGTCCATAAGTACCTCTATT CTAACTGCACTGTTGAGTGGAAGAAATGTGCTGAGATGTCAGTCTGAAAGCAAGACTCAT ACAAGTCCTACTGAGAAGAATGGCCAACTTCCTGTAGGATCTAATGCTATTGAGATCGCA TTATCGTGCTTGGAAAGTAACAATGGGCTGAACATGAAATTTTCTTCATCATGGTGTCAA AGGGTGCTTCCAGCTGCTAAGGAGATATACCTGAAAGGTTTGCCTGCCTTTTACCCCACA AGAATGCATGAAGTGCAGCTACAGAAGGCATTGCGGTCCTTTGGCTCAATGGTTAAAGGA CCAGCAGTCAGGGTATTCTCAAAGAAGCTAGAAGATGAGTGCCGGGCAATATGGGAATCT GGAAGGCAGCAATGTGACGCTGTTAGCCTAACTGGCAGACCATGTAAGCACCGCAGGCAT GGCGATTTCTTTTCATCAGATGCAATGGAGCAACATTCTAGTGGATATGTCTTCCTCCAT GCATGTTCCTGTGGCCGGTCACGCCGCCTTAGAGATGATCCTTTTGACTTTCAGACAGCC AACGTGTCTTTTAATTGTTTCCAAAATTGCGATGACCTATTACCTACCCTTGCGCTTCCA AGAGGCAGCAATGATGGTTCATTTTCAGTATCCTCTTGGTGCTTGGTGCGTCTTGGAGGA GCAAGGTACTACAAGCCAACAAAAGGACTCCTTCAAAGTGGATTTAGCTCCAAGGAGAGG TATCTTCTAAGGTGGATTGTATCTGTTCATAAGGGGCAAGTGAGAAATGACATTCGTTCT AATACTATTACTTCATCCGCAAGATCTGGTATGAACCCGCAGACTCCCCCAATAGTCACT GGTGAAGTAAAATCTGCCATAACCCAAGTCACAGCACAAATTAAATATGCAAAGCTTGAA AATTCTGGAAAACAAGCTGAAGTTGAACCAGTGAGCAACTTAGGCATTAATTTTGGTAAA GGTCTGCCAAATTTTACTATGAAAAAGCCCTTTTCTGAAGTTGTTGCTGGCACCACATCA AAAGATACCGAGTTTCCTGCTCTTCAGCAGACAAGGCCACCAAAACCTGGTGGTCGAAAA GATGAGCAGCGTCAAATGAATATAGTAGACCAGACTAATGGCCGAGGTCATGTGGCTGTC AGCCAAGGGTCTGTAGCTGAAACTGAATCGGCAAAAGCAAGCAGAAACAAGAGTAGTGAA AATGCTGATGGGAAGCCCTTTTTACAGATAGGGAGCAATATAGTACCAGTGATTGCTGGA AATGAGACTAGAGAAACTAGTCAGCCAGTACAACAGTTTGTTGTGTATATTGGATTTGAG CATGAGTGTCCCTATGGTCATCGCTTCTTACTGTCAGAGAAACATATGAAGGAGATCGAG TCTTCCTGTTTGCAGTATCAAAGACCTCATCTAAACAAAGAAGCAGAAGTCAAGCATGCA CAAAAGTTGCTCCAAAATGCATCTGGTTTAATAGCATCTGCAGTGGACATAAACAGTGCA CGGAAAAACAGTAAGCCATTGGAATCATCAGGGAGAAACAGCCAGCAGCAATCACTGCAG CTGAGGATTGATGCAGAGACCTCACAGCCTTCTCCTCGGCTTTCAGATCCACAGAATGCC AAAAGGTGGGAGCATTATTTTCGAAGCGTTACAATTGATGATGGTGGAGAAGCATTTTCA CTGATGAACAGAAACTTGCCAATATATATGCGCTGTCCACATTGCAAGGTCTCAGAAAGG AAGGAACATCAAGATGTAAAGTTTGCTGGTGTTGTGTCTCAACTTCAGCGGATTTTCATT GTGACACCTGATTTCCCTGTTCTGTTGGCAAGCTGCCCACTTGTACAGTTTGAGGGGTCA TGTTTGCCATCAAATGTCTCTGATCATGATCGAGAAGGATCATTCAGTATTGGGTGCCGA GTTATCCTCCCACCTGAGAGCTTTCTTACTATGAGGCTTCCCTTTGTCTATGGTGTTGAG ACAAAGGAGGGAAGTAAATTTCCCCTCAAATACTTTGAGCGACAACCAGAACTCACAGCA TGGCTTGTTGCAGGCACAGCCCTGCAAATCGTGTCGGTAGGGGATGTCACTGAGAAAGAA ACCGTTATGAAGTGA

Peptide Sequence

PEP ID	Zm00001d051866_P031
PEP Infomation	pep chromosome:B73_RefGen_v4:4:172761796:172766959:-1 gene:Zm00001d051866 transcript:Zm00001d051866_T031 gene_biotype:protein_coding transcript_biotype:protein_coding description:DUF2146 family protein
Sequence	MEPPSPPATHSAAVRVLSRTPPPTSPNPSSTGPAAPSPASRDGVVAVGFVGAAGTARLAD RILDAHVFSPGGSAGSLAGRVRYHRDAGKRMVFLHLTPPPPAPLEAVAGCCDDGELPEML FMFSVCHVIIFLQQGFRFNTQTLKKFRLLQSSKHALAPFVKPLVAAAMPARTVASDTPTR ATHRASSVSPPTRRGGHAGRQSSAISLMSGTSSTPSVLPGQCIPVLLFVFEDDAVDVSSA AASPDDIGDASSSNQGSTPDGLPKQSLASKSSGSVIMLSRAANKSEGSSGKKLHSSLEGQ IRVLIKKCRVLAGMEPGHIGPRGVSNMSHHLPLFSLDTSRVVALLERYINKKQEPLDTIA GLFEDSLCSKSPLDILSLENNYHPTNHDDFQLIKDFIFRQSDALRGKGGYSSNASAGSVA GVGMVAAAAAAAAASAASGKPVNAPDLPTFDKWLSISTSILTALLSGRNVLRCQSESKTH TSPTEKNGQLPVGSNAIEIALSCLESNNGLNMKFSSSWCQRVLPAAKEIYLKGLPAFYPT RMHEVQLQKALRSFGSMVKGPAVRVFSKKLEDECRAIWESGRQQCDAVSLTGRPCKHRRH GDFFSSDAMEQHSSGYVFLHACSCGRSRRLRDDPFDFQTANVSFNCFQNCDDLLPTLALP RGSNDGSFSVSSWCLVRLGGARYYKPTKGLLQSGFSSKERYLLRWIVSVHKGQVRNDIRS NTITSSARSGMNPQTPPIVTGEVKSAITQVTAQIKYAKLENSGKQAEVEPVSNLGINFGK GLPNFTMKKPFSEVVAGTTSKDTEFPALQQTRPPKPGGRKDEQRQMNIVDQTNGRGHVAV SQGSVAETESAKASRNKSSENADGKPFLQIGSNIVPVIAGNETRETSQPVQQFVVYIGFE HECPYGHRFLLSEKHMKEIESSCLQYQRPHLNKEAEVKHAQKLLQNASGLIASAVDINSA RKNSKPLESSGRNSQQQSLQLRIDAETSQPSPRLSDPQNAKRWEHYFRSVTIDDGGEAFS LMNRNLPIYMRCPHCKVSERKEHQDVKFAGVVSQLQRIFIVTPDFPVLLASCPLVQFEGS CLPSNVSDHDREGSFSIGCRVILPPESFLTMRLPFVYGVETKEGSKFPLKYFERQPELTA WLVAGTALQIVSVGDVTEKETVMK

Transcript Sequence

Transcript ID	Zm00001d051866_T031
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:172761796:172766959:-1 gene:Zm00001d051866 gene_biotype:protein_coding transcript_biotype:protein_coding description:DUF2146 family protein
Sequence	AAAGCCGACTACTATAGGCTGTCGTAGCCAACAAGCGCGACATCCTCCGCCCCCACCTCG CCGCCGGCGATGGAGCCGCCTTCGCCTCCGGCGACCCACTCCGCGGCCGTCCGTGTCCTC TCCCGCACTCCTCCGCCGACCTCCCCGAACCCCTCCTCCACGGGCCCGGCGGCCCCGTCG CCCGCCTCCCGCGACGGGGTCGTCGCCGTCGGCTTCGTGGGCGCCGCGGGGACCGCCCGC CTCGCGGACCGGATCCTCGACGCCCACGTCTTCTCTCCCGGTGGCTCGGCGGGGAGCCTC GCGGGAAGGGTAAGGTACCACCGCGACGCCGGCAAGAGGATGGTGTTCCTTCACCTCACG CCGCCGCCGCCCGCGCCGCTCGAGGCGGTGGCAGGATGCTGCGATGACGGCGAACTACCG GAGATGCTCTTCATGTTCTCTGTCTGCCACGTAATTATATTTCTGCAACAAGGCTTCAGA TTTAACACACAAACCTTAAAGAAGTTCCGACTGCTGCAATCTTCAAAGCATGCTCTCGCT CCATTTGTCAAGCCATTGGTGGCAGCTGCAATGCCTGCCAGAACTGTTGCCTCTGACACC CCAACAAGAGCAACCCACAGGGCTTCTTCCGTCTCCCCTCCAACACGCCGAGGAGGTCAC GCTGGGCGTCAGTCCTCGGCTATCTCACTTATGTCTGGAACCAGTTCAACTCCTTCTGTC TTGCCAGGCCAATGCATTCCTGTATTGCTCTTTGTCTTTGAGGATGATGCGGTTGATGTT TCAAGTGCTGCAGCAAGTCCCGATGATATAGGTGATGCATCTTCATCAAATCAGGGTTCT ACCCCTGATGGACTACCAAAACAGAGCTTAGCTTCAAAAAGTTCTGGTTCAGTAATTATG CTTTCCCGGGCAGCAAACAAATCTGAGGGCAGTTCAGGCAAAAAACTGCATTCGTCACTG GAGGGACAGATCCGTGTCTTGATCAAGAAGTGCAGGGTGCTTGCAGGCATGGAGCCTGGA CATATTGGCCCAAGGGGCGTAAGTAACATGAGTCATCATTTACCCCTGTTCTCACTCGAT ACCTCGAGGGTAGTTGCACTGTTGGAACGGTATATTAATAAGAAACAGGAACCACTGGAC ACCATTGCAGGACTATTTGAAGATTCTTTGTGCTCCAAATCGCCATTGGATATTCTTTCG CTCGAAAACAACTACCATCCAACAAACCATGATGACTTTCAGTTGATCAAGGATTTTATA TTTCGGCAGTCTGATGCGCTGAGAGGGAAAGGGGGATATTCAAGCAATGCAAGTGCCGGG TCTGTTGCAGGTGTTGGCATGGTGGCTGCTGCTGCTGCAGCAGCTGCAGCATCAGCTGCA TCTGGGAAACCAGTTAATGCACCTGACCTCCCTACTTTTGATAAATGGTTGTCCATAAGT ACCTCTATTCTAACTGCACTGTTGAGTGGAAGAAATGTGCTGAGATGTCAGTCTGAAAGC AAGACTCATACAAGTCCTACTGAGAAGAATGGCCAACTTCCTGTAGGATCTAATGCTATT GAGATCGCATTATCGTGCTTGGAAAGTAACAATGGGCTGAACATGAAATTTTCTTCATCA TGGTGTCAAAGGGTGCTTCCAGCTGCTAAGGAGATATACCTGAAAGGTTTGCCTGCCTTT TACCCCACAAGAATGCATGAAGTGCAGCTACAGAAGGCATTGCGGTCCTTTGGCTCAATG GTTAAAGGACCAGCAGTCAGGGTATTCTCAAAGAAGCTAGAAGATGAGTGCCGGGCAATA TGGGAATCTGGAAGGCAGCAATGTGACGCTGTTAGCCTAACTGGCAGACCATGTAAGCAC CGCAGGCATGGCGATTTCTTTTCATCAGATGCAATGGAGCAACATTCTAGTGGATATGTC TTCCTCCATGCATGTTCCTGTGGCCGGTCACGCCGCCTTAGAGATGATCCTTTTGACTTT CAGACAGCCAACGTGTCTTTTAATTGTTTCCAAAATTGCGATGACCTATTACCTACCCTT GCGCTTCCAAGAGGCAGCAATGATGGTTCATTTTCAGTATCCTCTTGGTGCTTGGTGCGT CTTGGAGGAGCAAGGTACTACAAGCCAACAAAAGGACTCCTTCAAAGTGGATTTAGCTCC AAGGAGAGGTATCTTCTAAGGTGGATTGTATCTGTTCATAAGGGGCAAGTGAGAAATGAC ATTCGTTCTAATACTATTACTTCATCCGCAAGATCTGGTATGAACCCGCAGACTCCCCCA ATAGTCACTGGTGAAGTAAAATCTGCCATAACCCAAGTCACAGCACAAATTAAATATGCA AAGCTTGAAAATTCTGGAAAACAAGCTGAAGTTGAACCAGTGAGCAACTTAGGCATTAAT TTTGGTAAAGGTCTGCCAAATTTTACTATGAAAAAGCCCTTTTCTGAAGTTGTTGCTGGC ACCACATCAAAAGATACCGAGTTTCCTGCTCTTCAGCAGACAAGGCCACCAAAACCTGGT GGTCGAAAAGATGAGCAGCGTCAAATGAATATAGTAGACCAGACTAATGGCCGAGGTCAT GTGGCTGTCAGCCAAGGGTCTGTAGCTGAAACTGAATCGGCAAAAGCAAGCAGAAACAAG AGTAGTGAAAATGCTGATGGGAAGCCCTTTTTACAGATAGGGAGCAATATAGTACCAGTG ATTGCTGGAAATGAGACTAGAGAAACTAGTCAGCCAGTACAACAGTTTGTTGTGTATATT GGATTTGAGCATGAGTGTCCCTATGGTCATCGCTTCTTACTGTCAGAGAAACATATGAAG GAGATCGAGTCTTCCTGTTTGCAGTATCAAAGACCTCATCTAAACAAAGAAGCAGAAGTC AAGCATGCACAAAAGTTGCTCCAAAATGCATCTGGTTTAATAGCATCTGCAGTGGACATA AACAGTGCACGGAAAAACAGTAAGCCATTGGAATCATCAGGGAGAAACAGCCAGCAGCAA TCACTGCAGCTGAGGATTGATGCAGAGACCTCACAGCCTTCTCCTCGGCTTTCAGATCCA CAGAATGCCAAAAGGTGGGAGCATTATTTTCGAAGCGTTACAATTGATGATGGTGGAGAA GCATTTTCACTGATGAACAGAAACTTGCCAATATATATGCGCTGTCCACATTGCAAGGTC TCAGAAAGGAAGGAACATCAAGATGTAAAGTTTGCTGGTGTTGTGTCTCAACTTCAGCGG ATTTTCATTGTGACACCTGATTTCCCTGTTCTGTTGGCAAGCTGCCCACTTGTACAGTTT GAGGGGTCATGTTTGCCATCAAATGTCTCTGATCATGATCGAGAAGGATCATTCAGTATT GGGTGCCGAGTTATCCTCCCACCTGAGAGCTTTCTTACTATGAGGCTTCCCTTTGTCTAT GGTGTTGAGACAAAGGAGGGAAGTAAATTTCCCCTCAAATACTTTGAGCGACAACCAGAA CTCACAGCATGGCTTGTTGCAGGCACAGCCCTGCAAATCGTGTCGGTAGGGGATGTCACT GAGAAAGAAACCGTTATGAAGTGATAGACATGTCATATAAAGCTTTACTGGCTTTAGCAT GTTCTAGTCATATATCAGTGATTTGCTATCGCTGTTGACACAACTATTGCTTGCTTTCAC TGTGCTGGAAGCATTGTGAAATAGAAGTTCCGCTGATATCTGCCTGACCTGGATGGTGTA TATAGATGCAAGCAGAGGGGGCAGGCCCACAGGCAATCACGCCGTTCTTGTCTTTGTACA TGAAAGGTGCCAGGAGGTTAAGTTTAGCTGGTTATGTAAAGGTCCGCTTTTTGAGGACCT GTCCAGTGGATCAATCCCATTCCTAGACTGGTTTGCCTTGAGGCTTGGAGATTTTGTAGT AAGACTATTAGTTCAATTGAGCTGTTTGTCCAGTTGATGAGTTGTTTTATTCCTAGGCTT GTTGAGAAATCTGGCCTTGGAATATAGAACCCAGAAGAAAGGATTTT