Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d051849_T040
CDS Infomation

cds chromosome:B73_RefGen_v4:4:172184421:172202439:-1 gene:Zm00001d051849 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:JUMONJI-transcription factor 21 description:Transcription factor jumonji (jmjC) domain-containing protein
Sequence

ATGGCAGACGAGGCGGAGTGGAACGAGGCTGAGGCCGGGATCGCGGCCCCGGGCGCGGGC
GTGGCTCCTCCAGCGCCCGGAGGCGGCGAGGAAACCAAGAGGAAGAGGGGGAGGCCCAAA
GGTAGCCTCGACACGTATAAGAGGCGGAGGCGGAGGCGGCGCACCGGCGACCTGGTGTCG
GCGGTGCCCGCGGCTAGCCTCGGGGATATGGGCCACTCATGTGGCTGCATTCCCGCTCCC
CCACTCCCTCCCCCCTGCACTGTGTACACTGTACGCGACGGCGGCGTGGCAATCACCCCT
CAATCCATGGAGGACGAAGCGGAGGGGGTCGAGGCTGAGTCCGGGAATGCGGGCGCGGCC
TCCGCCGCCAGAGACGGCGAGGAAACCAAGCGGAAGAGGGGAAGTCCCGAAGGTAGCTTG
AATGAGAGGAACAAGGACAGGACGCCTAAGCCCAAGGCCAAGGGGAGGCGGAGGCGGCGC
ACCGACGACCAGACCTTGTCGGTGTCCGCGGTGAGCCTCGGGGATCTAGGGCTCGGGGTA
GCGGCGGGGACCAGGTCGATCAGAGAGAGGAGGCCGGCGCCCAATGCGTTCTTCGACGTG
GGCAGCGACAGCGATACTGAGCATGATGATGATGATGATGAGGAGCAAACTACGATTGAT
CAGGCCAATCACGAGAGTGCTAAAACAGGTGATTCTGTAAAGAAGGGAGGAAGACCCAGG
AAAATGGAAGCGGGCCAATTGCATACTAGGACGCAGATTTCCAATGGTAAAAGCAACGGC
CATACAAATGGGAATCCTGCTGGGAAGAAGAGGGGAAGGGGAAGACCCAAGAAACTGACA
GTAGAACAAGCGATTACTAGGTGCCAGTTCTCCAATGGTGAAACAAACAAGAGTGGTGCC
GAGGCAGCAAGGAGCAAACAGTCAAGGAATCGTAGGATTTCACAGAATGCAAAGAAGCGG
AAAAGAGATGAAGGGAAGGAGTCTATGACAAAAAAGTTGAACAAACGGAGTAAGATGTTG
ACTGGGGAAAATGCCCTCATGTGCCACCAGTGCCAGAGGAAGGACAAACCACGGGTTGTC
CGGTGTCAGTCATGCAAAAAAAAGCGATTCTGTCTGCCATGCATAGAACAATGGTATCCT
AATTTGCCAGAAGATGAATTTGCTGTGAAGTGCCCATATTGTCGCAAGAACTGTAATTGC
AAGGCATGCCTAAGGATGAGGGGAGTTGAAGAGCCTCCAAAAAAGGAGATCTCTAAAGAA
AATGAAATTCGCTATGCTTTTCATATTGTAACCATGCTGCTTCCCTGGATGAGAGAACTG
CGACAAGAACAGTTGGAGGAGAAGGAAGTAGAGGCTAATATACAAGGAGTTTCAATGAAT
GAGATAAAAGTGGAACAAGCTGAGTTTGACCTAGATGATCGTGTATATTGCGATAGGTGT
AAAACATCTATTGTTGATTTTCATAGAAGCTGCAAGCGTTGTTTCTACGATCTTTGCCTT
AATTGCTGCAAGGAGCTTCGCAAAGGTGAGATCCCAGGAGGAGAAGAGGTGGAATATGTG
CCACCTGAACCTAAAGGTAGGAGTTATTCTTTTGGCAAGATTCATCTACTGAAGGATGCT
GATAGAAGTAAGAACTCCTCAAATGGCGAGTCTTACAACGGCATGCCTGCTGTTGGGAAC
TCCAATAATGGTCTGTTGCTCTGGAAAGCAAAAAGTAATGGTAGCATACCTTGTCCACCA
AAGGAAGTAGGAGGCTGTGGTAGTACACTTCTGGACCTCAAGTGTTTGTTTCCAGAGAAG
ATGTTTGCCGAGCTAGAATATAGAGCTGACAAAGTTCTCAGGAGTGGGACATTAGCTAAA
GCAATGGTTAGTAGAAGTGATCGGTGCCCTTGCTTCAATCAATCAGGCAAGATAAGAACT
GAAAGCAAATCAGTAAGGGAGGCTGCAAGCAGGAAGGGCTCAAGCGATAACTTCCTATAC
TGTCCAGTTGCTATTGGTATTCAAGATGATGACATAGTGCATTTTCAGATGCATTGGGCA
AAGGGTGAGCCAGTTGTTGTTTCTGATGTCCTTCAGTTAACCTCTGGTCTGAGTTGGGAG
CCAATGGTAATGTGGCGGGCATTGCGGGAAAGATCCAAAGGCAAAGCAGAAGATGAGCAA
TTTGCTGTTTGGGCGATAGACTGCCTTGATTGGTGTGAGGTGGAAATTAACATACATAGG
TTCTTTTCGGGATATACAACAGGCAGAACTCATGCTAGGACTCACTGGCCTCAGATGCTT
AAGCTAAAAGACTGGCCTCCTTCTAGTTCCTTTGACAAGCGATTGCCGCGGCATGGTGCC
GAATTTATTAGCGCATTGCCATTTCGTGAGTATACTGATCCACGATATGGCCCGCTAAAT
CTTGCAGCCAAGCTTCCTGCTGGTGTCTTGAAGCCAGATCTTGGACCCAAAAGTTACATT
GCTTATGGGTTCTACAAAGAATTGGGCAGGGGCGATTCTGTGACCAAGCTTCACTGTGAC
ATGTCTGATGCAGTAAATATCTTAACACACACAGCTGAAGTCACTTGTCAGACTGATATT
GGCTTAATTGAAAAA

Peptide Sequence

PEP ID

Zm00001d051849_P040
PEP Infomation

pep chromosome:B73_RefGen_v4:4:172184421:172202439:-1 gene:Zm00001d051849 transcript:Zm00001d051849_T040 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:JUMONJI-transcription factor 21 description:Transcription factor jumonji (jmjC) domain-containing protein
Sequence

MADEAEWNEAEAGIAAPGAGVAPPAPGGGEETKRKRGRPKGSLDTYKRRRRRRRTGDLVS
AVPAASLGDMGHSCGCIPAPPLPPPCTVYTVRDGGVAITPQSMEDEAEGVEAESGNAGAA
SAARDGEETKRKRGSPEGSLNERNKDRTPKPKAKGRRRRRTDDQTLSVSAVSLGDLGLGV
AAGTRSIRERRPAPNAFFDVGSDSDTEHDDDDDEEQTTIDQANHESAKTGDSVKKGGRPR
KMEAGQLHTRTQISNGKSNGHTNGNPAGKKRGRGRPKKLTVEQAITRCQFSNGETNKSGA
EAARSKQSRNRRISQNAKKRKRDEGKESMTKKLNKRSKMLTGENALMCHQCQRKDKPRVV
RCQSCKKKRFCLPCIEQWYPNLPEDEFAVKCPYCRKNCNCKACLRMRGVEEPPKKEISKE
NEIRYAFHIVTMLLPWMRELRQEQLEEKEVEANIQGVSMNEIKVEQAEFDLDDRVYCDRC
KTSIVDFHRSCKRCFYDLCLNCCKELRKGEIPGGEEVEYVPPEPKGRSYSFGKIHLLKDA
DRSKNSSNGESYNGMPAVGNSNNGLLLWKAKSNGSIPCPPKEVGGCGSTLLDLKCLFPEK
MFAELEYRADKVLRSGTLAKAMVSRSDRCPCFNQSGKIRTESKSVREAASRKGSSDNFLY
CPVAIGIQDDDIVHFQMHWAKGEPVVVSDVLQLTSGLSWEPMVMWRALRERSKGKAEDEQ
FAVWAIDCLDWCEVEINIHRFFSGYTTGRTHARTHWPQMLKLKDWPPSSSFDKRLPRHGA
EFISALPFREYTDPRYGPLNLAAKLPAGVLKPDLGPKSYIAYGFYKELGRGDSVTKLHCD
MSDAVNILTHTAEVTCQTDIGLIEK

Transcript Sequence

Transcript ID

Zm00001d051849_T040
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:172184421:172202439:-1 gene:Zm00001d051849 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:JUMONJI-transcription factor 21 description:Transcription factor jumonji (jmjC) domain-containing protein
Sequence

GATCGGCCAAAATCCGGCCAGAAACCTCGTCCGGCGGCATCAGCATTTCCTCTCCCACAT
TTCGCCCCGCCCTACGCCTACACGACGGCGCTGCGGCAAGCGCCGACCAATCCATGGCAG
ACGAGGCGGAGTGGAACGAGGCTGAGGCCGGGATCGCGGCCCCGGGCGCGGGCGTGGCTC
CTCCAGCGCCCGGAGGCGGCGAGGAAACCAAGAGGAAGAGGGGGAGGCCCAAAGGTAGCC
TCGACACGTATAAGAGGCGGAGGCGGAGGCGGCGCACCGGCGACCTGGTGTCGGCGGTGC
CCGCGGCTAGCCTCGGGGATATGGGCCACTCATGTGGCTGCATTCCCGCTCCCCCACTCC
CTCCCCCCTGCACTGTGTACACTGTACGCGACGGCGGCGTGGCAATCACCCCTCAATCCA
TGGAGGACGAAGCGGAGGGGGTCGAGGCTGAGTCCGGGAATGCGGGCGCGGCCTCCGCCG
CCAGAGACGGCGAGGAAACCAAGCGGAAGAGGGGAAGTCCCGAAGGTAGCTTGAATGAGA
GGAACAAGGACAGGACGCCTAAGCCCAAGGCCAAGGGGAGGCGGAGGCGGCGCACCGACG
ACCAGACCTTGTCGGTGTCCGCGGTGAGCCTCGGGGATCTAGGGCTCGGGGTAGCGGCGG
GGACCAGGTCGATCAGAGAGAGGAGGCCGGCGCCCAATGCGTTCTTCGACGTGGGCAGCG
ACAGCGATACTGAGCATGATGATGATGATGATGAGGAGCAAACTACGATTGATCAGGCCA
ATCACGAGAGTGCTAAAACAGGTGATTCTGTAAAGAAGGGAGGAAGACCCAGGAAAATGG
AAGCGGGCCAATTGCATACTAGGACGCAGATTTCCAATGGTAAAAGCAACGGCCATACAA
ATGGGAATCCTGCTGGGAAGAAGAGGGGAAGGGGAAGACCCAAGAAACTGACAGTAGAAC
AAGCGATTACTAGGTGCCAGTTCTCCAATGGTGAAACAAACAAGAGTGGTGCCGAGGCAG
CAAGGAGCAAACAGTCAAGGAATCGTAGGATTTCACAGAATGCAAAGAAGCGGAAAAGAG
ATGAAGGGAAGGAGTCTATGACAAAAAAGTTGAACAAACGGAGTAAGATGTTGACTGGGG
AAAATGCCCTCATGTGCCACCAGTGCCAGAGGAAGGACAAACCACGGGTTGTCCGGTGTC
AGTCATGCAAAAAAAAGCGATTCTGTCTGCCATGCATAGAACAATGGTATCCTAATTTGC
CAGAAGATGAATTTGCTGTGAAGTGCCCATATTGTCGCAAGAACTGTAATTGCAAGGCAT
GCCTAAGGATGAGGGGAGTTGAAGAGCCTCCAAAAAAGGAGATCTCTAAAGAAAATGAAA
TTCGCTATGCTTTTCATATTGTAACCATGCTGCTTCCCTGGATGAGAGAACTGCGACAAG
AACAGTTGGAGGAGAAGGAAGTAGAGGCTAATATACAAGGAGTTTCAATGAATGAGATAA
AAGTGGAACAAGCTGAGTTTGACCTAGATGATCGTGTATATTGCGATAGGTGTAAAACAT
CTATTGTTGATTTTCATAGAAGCTGCAAGCGTTGTTTCTACGATCTTTGCCTTAATTGCT
GCAAGGAGCTTCGCAAAGGTGAGATCCCAGGAGGAGAAGAGGTGGAATATGTGCCACCTG
AACCTAAAGGTAGGAGTTATTCTTTTGGCAAGATTCATCTACTGAAGGATGCTGATAGAA
GTAAGAACTCCTCAAATGGCGAGTCTTACAACGGCATGCCTGCTGTTGGGAACTCCAATA
ATGGTCTGTTGCTCTGGAAAGCAAAAAGTAATGGTAGCATACCTTGTCCACCAAAGGAAG
TAGGAGGCTGTGGTAGTACACTTCTGGACCTCAAGTGTTTGTTTCCAGAGAAGATGTTTG
CCGAGCTAGAATATAGAGCTGACAAAGTTCTCAGGAGTGGGACATTAGCTAAAGCAATGG
TTAGTAGAAGTGATCGGTGCCCTTGCTTCAATCAATCAGGCAAGATAAGAACTGAAAGCA
AATCAGTAAGGGAGGCTGCAAGCAGGAAGGGCTCAAGCGATAACTTCCTATACTGTCCAG
TTGCTATTGGTATTCAAGATGATGACATAGTGCATTTTCAGATGCATTGGGCAAAGGGTG
AGCCAGTTGTTGTTTCTGATGTCCTTCAGTTAACCTCTGGTCTGAGTTGGGAGCCAATGG
TAATGTGGCGGGCATTGCGGGAAAGATCCAAAGGCAAAGCAGAAGATGAGCAATTTGCTG
TTTGGGCGATAGACTGCCTTGATTGGTGTGAGGTGGAAATTAACATACATAGGTTCTTTT
CGGGATATACAACAGGCAGAACTCATGCTAGGACTCACTGGCCTCAGATGCTTAAGCTAA
AAGACTGGCCTCCTTCTAGTTCCTTTGACAAGCGATTGCCGCGGCATGGTGCCGAATTTA
TTAGCGCATTGCCATTTCGTGAGTATACTGATCCACGATATGGCCCGCTAAATCTTGCAG
CCAAGCTTCCTGCTGGTGTCTTGAAGCCAGATCTTGGACCCAAAAGTTACATTGCTTATG
GGTTCTACAAAGAATTGGGCAGGGGCGATTCTGTGACCAAGCTTCACTGTGACATGTCTG
ATGCAGTAAATATCTTAACACACACAGCTGAAGTCACTTGTCAGACTGATATTGGCTTAA
TTGAAAAAAT