Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d051838_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:171769089:171772184:-1 gene:Zm00001d051838 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger C-x8-C-x5-C-x3-H type family protein
Sequence	ATGGATTCAGCCGCCGCGCGACCCGACGAGGAGGAGGCGCGCCGCCGCCGGAGCACCGAC TGCATCTACTTCCTCGCCTCCCCGTTGACCTGCAAAAAGGGAAGTGAATGCGAGTACCGT CATAGCGATGCTGCGAGGATGAATCCCAGGGACTGCTGGTATTGGTTCCATGGCAACTGC GCAAATCCTAAATGCTCCTTTAGGCACCCGCCATTAGACAACATGGCCGGAGCACCAACG ACTCCACGTCCAGCTCAACAGTCTGTACCCCATCAAGCTTCAGCTTCTGTTCCAGCTCAG CCCCAGGGATCTGTTCCTGCCACTGCCAAGCAGGGTGTTCCATGCTATTACTTTCAGAAG GGCATGTGCACGAAAGGGGACAGGTGTGCCTTTCTGCATGCGCCCCGGTCTGCTGGAAAC CCTGCTCCACAGCCTCCGGCCAAGGTCTTCACCACCCCTGCCTTGCAGCCTAATCTCCAT CCACCGTTGAACAACTCGTGGACAAAACCCAACTTGAGTGCTCCTGCAGTAGCCGTAGTT GACAAGCCAAAGGCCAGCACTTATCATGATGGTAAACCGCTTCATCACAAGGAAAATCTG ACGAGTAGGACCGAAAACCCATCAAGAGTAGTTTATCAGAATCACAGTAGTTCTTATGCA CAGCCCGGTGCACCAAAGCGTTACCAGCCTCAGCCTTCAGCCCGAGATGGCTTAACCGAC AATGGTATGGAGGCTGGCGAATTTGCGAGAGAACCATCCGCCGGTTCTTGTGTAACTGCC GGTTTTAATGGTGCTGGAGGGATGACGAGGCAAACACATGGTGGCTATGAACCAGAAAGG TCATACAGAAATTCAGCAGAGAGGTCTTCGTCAGAGAAAAGGATTCCCCAGAGAGAGCAT ATCCCCTCTGTGGCTGCCGGCAGTTCGGATCTGCGCCATAGGCTACTGAAGCAAAGAAAG TCCAATAATAATTCAAGGTCGGCTGAAGCCCTGGGCAGGCATGATACACATCTTGAGGAT GAGCGCAATGACCAACATCGTCCGCGAGGTGAACAGCAGGATGGCCTCTCACGGTCTCGA CTGCATGATAGAATAAGACTACCTGGGGAGACAGCGTTTGACAGTCTTGGGTCACGGTCA GAGGAGTGGGATAGAGGGTCTAGAGCCAGATTGTCGCCACCAAAATCCTCAGATCTTCGA GGGAGGCTTCATGAAAGGCTAAAGGGTAGATTGGGTGAGGAGATACCGGGTAGCAGTGCA AAAGGTTTGGCAGTGAAGGCAAGTAGCAGTGAGGATACTGAATCACTGAACTTTGCTGGT CCAAAGAGCCTTGCAGAGTTGAAGGCAAAGAAAGGTGTCGGCAGGTCAGGAGAAGATGCC GTCGTCAAGGGCTTAGGTTCTTCTCGTATGACTTCAGAAATAGTTTGGAGCAGGGAGGCT GCTTCGTTTGAAGGTCCAAAGCCCCTAAGTGCCATACTGAAGAGAAAAAGAGAGCCAGCT TCTGAAATCCCCGCTGCCCAGCCTGGCATCACACAGGAAGCAGATAACTACGCCGCAGGA GCTGAAGAAGAAATCCAAACCCTAGCAAATGACACGGTTGGGGAGAACATGGAGGGGATT GGAGAAGAAGAGGAGGAAGAGGAAGCTTTCCATCCTGAAGATGATGTGGCGTACGACGAT AACGCCAATGAAGCTGCAGTGGCCCAAGAGCTGGATGAGTATGAAGACGCAGATGCGGCA GCACAAGACTATGACGATGAAGCTGCAGCTGCCCAAGAGGTGGAGGAGCATCAAGACGGA GAGGCAGCAGCAGAAGACTACGACTATGAGGAGGCAGACGTCAACGCCGAGGAAGAGAAT GAGTACCAGGACTACCAAGACGAGGACGACGACGATTTGGAGGATGGGGACGACGATTTT GCACGAAAAGTGAGCGTGATGATCTCCTGA

Peptide Sequence

PEP ID	Zm00001d051838_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:171769089:171772184:-1 gene:Zm00001d051838 transcript:Zm00001d051838_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger C-x8-C-x5-C-x3-H type family protein
Sequence	MDSAAARPDEEEARRRRSTDCIYFLASPLTCKKGSECEYRHSDAARMNPRDCWYWFHGNC ANPKCSFRHPPLDNMAGAPTTPRPAQQSVPHQASASVPAQPQGSVPATAKQGVPCYYFQK GMCTKGDRCAFLHAPRSAGNPAPQPPAKVFTTPALQPNLHPPLNNSWTKPNLSAPAVAVV DKPKASTYHDGKPLHHKENLTSRTENPSRVVYQNHSSSYAQPGAPKRYQPQPSARDGLTD NGMEAGEFAREPSAGSCVTAGFNGAGGMTRQTHGGYEPERSYRNSAERSSSEKRIPQREH IPSVAAGSSDLRHRLLKQRKSNNNSRSAEALGRHDTHLEDERNDQHRPRGEQQDGLSRSR LHDRIRLPGETAFDSLGSRSEEWDRGSRARLSPPKSSDLRGRLHERLKGRLGEEIPGSSA KGLAVKASSSEDTESLNFAGPKSLAELKAKKGVGRSGEDAVVKGLGSSRMTSEIVWSREA ASFEGPKPLSAILKRKREPASEIPAAQPGITQEADNYAAGAEEEIQTLANDTVGENMEGI GEEEEEEEAFHPEDDVAYDDNANEAAVAQELDEYEDADAAAQDYDDEAAAAQEVEEHQDG EAAAEDYDYEEADVNAEEENEYQDYQDEDDDDLEDGDDDFARKVSVMIS

Transcript Sequence

Transcript ID	Zm00001d051838_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:171769089:171772184:-1 gene:Zm00001d051838 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger C-x8-C-x5-C-x3-H type family protein
Sequence	AGAGTGAGAGAGTAGCAGCCGGTGCAGGGCTGGCTTGGCAGATTGGGATCCCCTCCCCTC CCTCCTCCCACCCCCTTGCCTTGAGCTGGGGGTTCGTTCAGGAAGCTGATCTGAGAGCTC GCGACCGCAACCACAACCAACCCAAAAAGCTGCAGCAGATCCATCCTTCTCACCCGAAAC AATCGATCCCCTCTTATAGACTTCGCCTGCCTCCAACCCTTAATCTTCAGCTATGGATTC AGCCGCCGCGCGACCCGACGAGGAGGAGGCGCGCCGCCGCCGGAGCACCGACTGCATCTA CTTCCTCGCCTCCCCGTTGACCTGCAAAAAGGGAAGTGAATGCGAGTACCGTCATAGCGA TGCTGCGAGGATGAATCCCAGGGACTGCTGGTATTGGTTCCATGGCAACTGCGCAAATCC TAAATGCTCCTTTAGGCACCCGCCATTAGACAACATGGCCGGAGCACCAACGACTCCACG TCCAGCTCAACAGTCTGTACCCCATCAAGCTTCAGCTTCTGTTCCAGCTCAGCCCCAGGG ATCTGTTCCTGCCACTGCCAAGCAGGGTGTTCCATGCTATTACTTTCAGAAGGGCATGTG CACGAAAGGGGACAGGTGTGCCTTTCTGCATGCGCCCCGGTCTGCTGGAAACCCTGCTCC ACAGCCTCCGGCCAAGGTCTTCACCACCCCTGCCTTGCAGCCTAATCTCCATCCACCGTT GAACAACTCGTGGACAAAACCCAACTTGAGTGCTCCTGCAGTAGCCGTAGTTGACAAGCC AAAGGCCAGCACTTATCATGATGGTAAACCGCTTCATCACAAGGAAAATCTGACGAGTAG GACCGAAAACCCATCAAGAGTAGTTTATCAGAATCACAGTAGTTCTTATGCACAGCCCGG TGCACCAAAGCGTTACCAGCCTCAGCCTTCAGCCCGAGATGGCTTAACCGACAATGGTAT GGAGGCTGGCGAATTTGCGAGAGAACCATCCGCCGGTTCTTGTGTAACTGCCGGTTTTAA TGGTGCTGGAGGGATGACGAGGCAAACACATGGTGGCTATGAACCAGAAAGGTCATACAG AAATTCAGCAGAGAGGTCTTCGTCAGAGAAAAGGATTCCCCAGAGAGAGCATATCCCCTC TGTGGCTGCCGGCAGTTCGGATCTGCGCCATAGGCTACTGAAGCAAAGAAAGTCCAATAA TAATTCAAGGTCGGCTGAAGCCCTGGGCAGGCATGATACACATCTTGAGGATGAGCGCAA TGACCAACATCGTCCGCGAGGTGAACAGCAGGATGGCCTCTCACGGTCTCGACTGCATGA TAGAATAAGACTACCTGGGGAGACAGCGTTTGACAGTCTTGGGTCACGGTCAGAGGAGTG GGATAGAGGGTCTAGAGCCAGATTGTCGCCACCAAAATCCTCAGATCTTCGAGGGAGGCT TCATGAAAGGCTAAAGGGTAGATTGGGTGAGGAGATACCGGGTAGCAGTGCAAAAGGTTT GGCAGTGAAGGCAAGTAGCAGTGAGGATACTGAATCACTGAACTTTGCTGGTCCAAAGAG CCTTGCAGAGTTGAAGGCAAAGAAAGGTGTCGGCAGGTCAGGAGAAGATGCCGTCGTCAA GGGCTTAGGTTCTTCTCGTATGACTTCAGAAATAGTTTGGAGCAGGGAGGCTGCTTCGTT TGAAGGTCCAAAGCCCCTAAGTGCCATACTGAAGAGAAAAAGAGAGCCAGCTTCTGAAAT CCCCGCTGCCCAGCCTGGCATCACACAGGAAGCAGATAACTACGCCGCAGGAGCTGAAGA AGAAATCCAAACCCTAGCAAATGACACGGTTGGGGAGAACATGGAGGGGATTGGAGAAGA AGAGGAGGAAGAGGAAGCTTTCCATCCTGAAGATGATGTGGCGTACGACGATAACGCCAA TGAAGCTGCAGTGGCCCAAGAGCTGGATGAGTATGAAGACGCAGATGCGGCAGCACAAGA CTATGACGATGAAGCTGCAGCTGCCCAAGAGGTGGAGGAGCATCAAGACGGAGAGGCAGC AGCAGAAGACTACGACTATGAGGAGGCAGACGTCAACGCCGAGGAAGAGAATGAGTACCA GGACTACCAAGACGAGGACGACGACGATTTGGAGGATGGGGACGACGATTTTGCACGAAA AGTGAGCGTGATGATCTCCTGATAGCGACAGAAAGCGGTTCATTCCCCACAAAGTGTTTA TCTCCTTTGGCGCGAGGTACTTTTTAGTTCACTGCGCAAAAGACAGAGACTAATATAGGT GGGAGAAGAGAGATAGAAGAATGGACATTGTTGAGAAAATGAGCTCCTCCATCCATCGGA GAGCTCGCTTGTTGACCTGTCTGTCTGTACTGTACTACTCACGCAAATGTGATGCGGCTT CTCTATAGACTCCTGCATGTATTTTTAGTTGACATGAGAACAGTACTGTATCCGTATTTG CTGCTGCTTCTTTTTTTTTTTGAAGAAAACATATTGCTGCCTGGTAGAAGATACATCTAC AGTTCATT