Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d051814_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:4:170342948:170346103:1 gene:Zm00001d051814 gene_biotype:protein_coding transcript_biotype:protein_coding description:Endoglucanase 11
Sequence	ATGAGTAGCGCCGCTTCGTCCCCGTGCCACCGGCTCCGCCGCGTCGCGCTGCTGCTGCTC GTTGCCGCGGTCCTCGCCGGTGGAACCGAGGGGAAGGCGCACGACTACGGGGACGCGCTG CGCAAGAGCCTGCTCTACTTCGAGGCGCAGCGCTCGGGCCGCCTCCCGCACAGCCAGCGC GTCGCATGGCGCCACCACTCCGGCCTCACCGACGGGCTCGAGCAAGGGGTGGACTTGGTG GGAGGATACTACGACGCCGGGGACCACGTCAAGTTCGGCCTGCCCATGGCGTTCACCGTC ACCATGCTGTCGTGGAGCCTGATCGAGTACGGCGGCGACGTCGCGGACGCCGGCGAGCTC GGCCACGCGCTCGAGGCCGTCAAGTGGGGCACCGACTACTTCATCAAGGCGCACACCAGG CCCGACGAGCTCTGGGCTGAGGTGGGCGACGGCGACACGGACCACTACTGCTGGCAGCGG CCGGAGGACATGACGACGTCGCGGCAGGCGTACAAGGTCGACCGGGACCACCCGGGCTCC GACGTCGCCGGCGAGACCGCGGCGGCCATGGCGGCCGCGTCCATCGTCTTCCGCGGCTCC AACCCGCACTACGCGCACCTCCTCCTGCACCACGCCCAGCAGCTGTTCGAGTTCGCCGAC AAGTACAGGGGGACATACGACAGCAGCATCGCGGAGGTGAAGAGCTACTACGCGTCGGTG AGCGGGTACAAGGACGAGCTACTGTGGGCCGCCCTGTGGCTCCACCGCGCCACCGGCAGA GATGACTACCTCGACTACGTCGTCGACAACGCCGACAGCTTCGGCGGCACCGGCTGGGCC ATCAACGAGTTCAGCTGGGACGTCAAGTACGCCGGCGTCCAGATCCTAGCGGCAAGGCTG CTGCTGAGAGGGGAGCACGCGCCGCGCCACCGGAGCACGCTGGAGCGGTACAGGGCCAAG GCGGAGCGGTACGTGTGCGCGTGCCTGGGCCGGAACACGGAGGGCGGCGCGGACGCCAAC GTGGAGCGCAGCCCCGGCGGGATGCTCTACGTCCGGCAGTGGAACAACATGCAGTACGTG ACCGGCGCCGCGCTCCTTCTCTCCGCCTACTCCGACTACCTGGCGGCCGCCGAGGCCGGC GGCGCCGCCCGGGCCGTGTCGTGCGCGGCGGCGGCCGAGGAGGTGTTCGCGCTCGCCAGG GCGCAGGCGGACTACGTGCTGGGCACCAACCCCCGGGGCGCCAGCTACCTCGTCGGCTAC GGCTCCAGGTACCCCGGCCGGGTGCACCACCGCGCCGCGTCCATCGTGCCGTACAAGCAC AGCAGGGAGTTCATCGGCTGCACGCAGGGGTTCGACCACTGGTTCGGCCGGCGGGGCTCC AACCCCAATTTGCTCGTCGGCGCGATCGTCGGCGGGCCGGACAGGCGCGACAGGTTCAGG GACAGCCGCGACAACTACATGCAGACGGAGGCCTGCACGTACAATACGGCCCCGATGGTC GGCGTATTCGCTAAGCTGCGCCGGATGGCGTGGCTGGAGCGGGAACAGGGGTCCACGTCG GTGCCCGTCACCGTCACGTCCACGGCGGCCGAGGTGTAA

Peptide Sequence

PEP ID	Zm00001d051814_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:4:170342948:170346103:1 gene:Zm00001d051814 transcript:Zm00001d051814_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Endoglucanase 11
Sequence	MSSAASSPCHRLRRVALLLLVAAVLAGGTEGKAHDYGDALRKSLLYFEAQRSGRLPHSQR VAWRHHSGLTDGLEQGVDLVGGYYDAGDHVKFGLPMAFTVTMLSWSLIEYGGDVADAGEL GHALEAVKWGTDYFIKAHTRPDELWAEVGDGDTDHYCWQRPEDMTTSRQAYKVDRDHPGS DVAGETAAAMAAASIVFRGSNPHYAHLLLHHAQQLFEFADKYRGTYDSSIAEVKSYYASV SGYKDELLWAALWLHRATGRDDYLDYVVDNADSFGGTGWAINEFSWDVKYAGVQILAARL LLRGEHAPRHRSTLERYRAKAERYVCACLGRNTEGGADANVERSPGGMLYVRQWNNMQYV TGAALLLSAYSDYLAAAEAGGAARAVSCAAAAEEVFALARAQADYVLGTNPRGASYLVGY GSRYPGRVHHRAASIVPYKHSREFIGCTQGFDHWFGRRGSNPNLLVGAIVGGPDRRDRFR DSRDNYMQTEACTYNTAPMVGVFAKLRRMAWLEREQGSTSVPVTVTSTAAEV

Transcript Sequence

Transcript ID	Zm00001d051814_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:170342948:170346103:1 gene:Zm00001d051814 gene_biotype:protein_coding transcript_biotype:protein_coding description:Endoglucanase 11
Sequence	CGCAGTCGCAGCAGGCACTAGGCAGGCAGGTTATAAGACGCGCGCGCGCGCGCGCCGCTC GGAACAGAGGAGGACTGGATCAGGAGTCGAGAGGGAAGAAGACAGCCCACAAAGCAGCCG GCGCCGCGCGGGGACTCTCCCCGCCCAATGAGTAGCGCCGCTTCGTCCCCGTGCCACCGG CTCCGCCGCGTCGCGCTGCTGCTGCTCGTTGCCGCGGTCCTCGCCGGTGGAACCGAGGGG AAGGCGCACGACTACGGGGACGCGCTGCGCAAGAGCCTGCTCTACTTCGAGGCGCAGCGC TCGGGCCGCCTCCCGCACAGCCAGCGCGTCGCATGGCGCCACCACTCCGGCCTCACCGAC GGGCTCGAGCAAGGGGTGGACTTGGTGGGAGGATACTACGACGCCGGGGACCACGTCAAG TTCGGCCTGCCCATGGCGTTCACCGTCACCATGCTGTCGTGGAGCCTGATCGAGTACGGC GGCGACGTCGCGGACGCCGGCGAGCTCGGCCACGCGCTCGAGGCCGTCAAGTGGGGCACC GACTACTTCATCAAGGCGCACACCAGGCCCGACGAGCTCTGGGCTGAGGTGGGCGACGGC GACACGGACCACTACTGCTGGCAGCGGCCGGAGGACATGACGACGTCGCGGCAGGCGTAC AAGGTCGACCGGGACCACCCGGGCTCCGACGTCGCCGGCGAGACCGCGGCGGCCATGGCG GCCGCGTCCATCGTCTTCCGCGGCTCCAACCCGCACTACGCGCACCTCCTCCTGCACCAC GCCCAGCAGCTGTTCGAGTTCGCCGACAAGTACAGGGGGACATACGACAGCAGCATCGCG GAGGTGAAGAGCTACTACGCGTCGGTGAGCGGGTACAAGGACGAGCTACTGTGGGCCGCC CTGTGGCTCCACCGCGCCACCGGCAGAGATGACTACCTCGACTACGTCGTCGACAACGCC GACAGCTTCGGCGGCACCGGCTGGGCCATCAACGAGTTCAGCTGGGACGTCAAGTACGCC GGCGTCCAGATCCTAGCGGCAAGGCTGCTGCTGAGAGGGGAGCACGCGCCGCGCCACCGG AGCACGCTGGAGCGGTACAGGGCCAAGGCGGAGCGGTACGTGTGCGCGTGCCTGGGCCGG AACACGGAGGGCGGCGCGGACGCCAACGTGGAGCGCAGCCCCGGCGGGATGCTCTACGTC CGGCAGTGGAACAACATGCAGTACGTGACCGGCGCCGCGCTCCTTCTCTCCGCCTACTCC GACTACCTGGCGGCCGCCGAGGCCGGCGGCGCCGCCCGGGCCGTGTCGTGCGCGGCGGCG GCCGAGGAGGTGTTCGCGCTCGCCAGGGCGCAGGCGGACTACGTGCTGGGCACCAACCCC CGGGGCGCCAGCTACCTCGTCGGCTACGGCTCCAGGTACCCCGGCCGGGTGCACCACCGC GCCGCGTCCATCGTGCCGTACAAGCACAGCAGGGAGTTCATCGGCTGCACGCAGGGGTTC GACCACTGGTTCGGCCGGCGGGGCTCCAACCCCAATTTGCTCGTCGGCGCGATCGTCGGC GGGCCGGACAGGCGCGACAGGTTCAGGGACAGCCGCGACAACTACATGCAGACGGAGGCC TGCACGTACAATACGGCCCCGATGGTCGGCGTATTCGCTAAGCTGCGCCGGATGGCGTGG CTGGAGCGGGAACAGGGGTCCACGTCGGTGCCCGTCACCGTCACGTCCACGGCGGCCGAG GTGTAAATAGATAGGATGTAGAGGAAGGGGGCTGTACAATTTTCCCCATTCTTTAGTTCA TTTTTTTCGAGCTTTGAATTTCATTTTACACAGATCGAGGTTATTGTATACGAGAAAGAA AAAAAAGAGAAAAGGGTGGAGGCGCCTACATGCATGTGCAATTCTGCAAAATGTAAATTC ACTACTGGTACATATGGAGAAATTTGACATTATGAA