Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d051812_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:4:170321917:170328279:1 gene:Zm00001d051812 gene_biotype:protein_coding transcript_biotype:protein_coding description: histidine kinase6
Sequence	ATGGGGGGCAACAAGTACTGCGCGGCGATGACGAAGAGGAGATGGAGGGGGCTGGCAGCG GCCGCGTGGGTGCTAGTCGCGGTGGCTTGCTCCGCGGTGATGCACTGGACCATGCGCCGG GAGAGCATGGACCGCGCCGAGGAGCGCCTCGTCAGCATGTGCGAGGAGAGGGCCAGGATG CTGCAGGAGCAGTTCGGGGTCACCGTCAACCACGTCCACGCGATCGCCATTCTCATCGCC ACCTTCAACTACGATAAGTCCCCTTCCGCTATCGACCAGGACACTTTTGCAAAATACACG GCAAGGACATCATTTGAGCGACCGCTACTCAATGGGGTGGCATATGCACAGCGTGTATTC CATCATGAGAGGGAAATGTTTGAAAGCCAGCAGGGATGGATTATGAATACAATGCAGCGG GAGCCTGCACCCCCGCAGGTTGAATATGCTCCAGTGATTTTCTCTCAGGATACTGTTTCC TACCTCGCACGCATTGACATGATGTCTGGAGAGGACCGAGAAAACATTTTGCGGGCCAGG ACTACTGGCAAAGCTGTGTTAACAAACCCATTTCGGTTGCTTGGATCAAACCACTTGGGA GTAGTTCTCACTTTTGCTGTGTACCGCCCTGATCTCCCCGCTGATGCATCAGTTGAGCAA CGTGTGGAAGCAACTATTGGATATCTTGGTGGAGCGTTTGATGTGGAGTCACTTGTGGAG AATTTGCTGAGCAAACTTGCTGGCAATCAGGATATTGTGGTGAATGTCTATGATGTCACA AATGCTTCAGAGGCTATGGTTTTGTATGGACCTTCTAGTTCGGATGAGCGCGTGCCTTTC TTGCATGTTAGCATGTTGGATTTTGGAGATCCGTTTAGGAGGCATGAAATGAGGTATAGA CAAAAGCTTCCTATGCAGTGGTCTGCCATAACCAATCCTTTGGGCACATTTGTCATATGG ATGCTTCTGGGGTATAGCATTGCCGCTGCATATTCTCGATATGACAAAGTTACAGAAGAT TGTAGAAAGATGGAAGAGCTAAAAACGCAGGCAGAAGCTGCTGATGTTGCAAAGTCTCAG TTCCTGGCAACTGTGTCACATGAGATCAGAACACCTATGAATGGCGTCCTTGGAATGCTG GATATGCTTTTAGGAACAGATCTAACTATGACACAGAAGGATTATGCTCAAACTGCTCAA ATGTGTGGCAGAGCATTGATAACGTTGATAAATGATGTCCTTGATCGAGCAAAGATTGAA GCTGGAAAGTTAGAGCTTGAAGCGGTGCCTTTTGACCTGCGTTCTCTCATGGATGATGTT ATTTCCTTATTTTCTTCAAAGTCACGGGAGAAGTGCATTGAGCTTGCAGTATTTGTATGT GACAATGTTCCGAAGGATGTTCTTGGAGATCCTTGGAGGTTTCGGCAGATACTAACAAAT TTGGTCGGCAATGCAGTCAAATTCACAGAACGGGGTCATGTATTTGTGCGGGTCTGTTTG GCTGATAACTCAAATATGGAAGCCGGTCAGGTCCTAAATGGAGCCATGAATGGGAAAGAT GGTAGAGTTGATTCAACAACTAATGGTGCCTTCAATACTCTGAGTGGGTTTGAAGCAGCA GACAGACGAAATAGTTGGCAATATTTTAAGATGCTCCTCTCTGATAAGGAGTCCCTTTTG GATGATCTTGAGGGAACAAATTCTGATCAAAGTGATTCAGACCATGTCACACTAGCGATA AGTATTGAGGACACAGGTGTTGGGATACCATTGCAAGCACAAGATCGTGTTTTTACACCG TTTATGCAGGCTGATAGTTCAACTTCAAGGAATTATGGTGGTACTGGCATCGGTTTAAGC ATTAGCAAGTGCCTAGCTGAACTTATGGGTGGGCAGATAAGTTTTGTCAGCCGTCCTTTT GTTGGAAGTACATTCACTTTCTCCACCACACTGAAGCGCTCATACAAAGATATTTCAGTT GATTCAAGTAGGAGCTTGTTAGAGGCACTACCAACTGCTTTTAAGGGAATGAAGGCCATC TTGATAGATGGGAGACCTGTACGTAGTGCTGTTACAAGATATCACCTCAAGAGGTTGGGA ATAATTGTTCAAGTTGTGAACAATATGAGTGCAGTAGTAAAAGCTTTCCCTGGACAAAAT GGAGCAACTGTTTCTAGGGAAAAGGCAACCATTCTTTTTATTGAGAGTGACTTTTGGAGG CCCGAGACAGATGTTCAGTTATTGAACCATCTACGCGAGCACAAGAATCGTCAGTTGTCT GATGGGCATAAGGTAGTTCTTTTGGTCACCTCCGAAGCTGATAAGGACAAGTATGGATCC ATATTTGATATTGTGATGTGCAAGCCTATAAGGGCAAGCATGATTGCTTCATCTATTCAA CAACTGCTCAAAGTAGAGATGCCTGAAAGAAGAAATAATCATAATCGGCCATCATTTCTT CGCAGCCTGCTGGTTGGGAAGAATATATTGGTAGTAGATGATAATAAAGTCAATCTTAGA GTCGCTGCAGCTGCACTCAAAAAGTACGGTGCTAATGTTAGCTGTGTTGAGAGTGGCAAA GATGCTATCAGTCTACTTCAACCCCCACATTGCTTTGACGCATGTTTTATGGATGTTCAG ATGCCAGAGATGGATGGGTTTGAGGCAACAAGACAAATAAGGCAAACAGAGATGAGAGTT AACGAGGAAAGGAAGAATAAGTTGGTGTTGATTGAAGGCTCAACATTTGTTGAGTACCAT TTGCCTGTTTTGGCGATGACAGCCGATGTTATCCAGGCAACTTACGAGAAGTGTATAAAA TCGGGAATGGATGGATACGTGTCTAAACCCTTCGACGAGGAGCAGCTATACCAAGCAGTC TCCAGATTAATAGTGGGAACGACAGATTCGACTGTTTAA

Peptide Sequence

PEP ID	Zm00001d051812_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:4:170321917:170328279:1 gene:Zm00001d051812 transcript:Zm00001d051812_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description: histidine kinase6
Sequence	MGGNKYCAAMTKRRWRGLAAAAWVLVAVACSAVMHWTMRRESMDRAEERLVSMCEERARM LQEQFGVTVNHVHAIAILIATFNYDKSPSAIDQDTFAKYTARTSFERPLLNGVAYAQRVF HHEREMFESQQGWIMNTMQREPAPPQVEYAPVIFSQDTVSYLARIDMMSGEDRENILRAR TTGKAVLTNPFRLLGSNHLGVVLTFAVYRPDLPADASVEQRVEATIGYLGGAFDVESLVE NLLSKLAGNQDIVVNVYDVTNASEAMVLYGPSSSDERVPFLHVSMLDFGDPFRRHEMRYR QKLPMQWSAITNPLGTFVIWMLLGYSIAAAYSRYDKVTEDCRKMEELKTQAEAADVAKSQ FLATVSHEIRTPMNGVLGMLDMLLGTDLTMTQKDYAQTAQMCGRALITLINDVLDRAKIE AGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVLGDPWRFRQILTN LVGNAVKFTERGHVFVRVCLADNSNMEAGQVLNGAMNGKDGRVDSTTNGAFNTLSGFEAA DRRNSWQYFKMLLSDKESLLDDLEGTNSDQSDSDHVTLAISIEDTGVGIPLQAQDRVFTP FMQADSSTSRNYGGTGIGLSISKCLAELMGGQISFVSRPFVGSTFTFSTTLKRSYKDISV DSSRSLLEALPTAFKGMKAILIDGRPVRSAVTRYHLKRLGIIVQVVNNMSAVVKAFPGQN GATVSREKATILFIESDFWRPETDVQLLNHLREHKNRQLSDGHKVVLLVTSEADKDKYGS IFDIVMCKPIRASMIASSIQQLLKVEMPERRNNHNRPSFLRSLLVGKNILVVDDNKVNLR VAAAALKKYGANVSCVESGKDAISLLQPPHCFDACFMDVQMPEMDGFEATRQIRQTEMRV NEERKNKLVLIEGSTFVEYHLPVLAMTADVIQATYEKCIKSGMDGYVSKPFDEEQLYQAV SRLIVGTTDSTV

Transcript Sequence

Transcript ID	Zm00001d051812_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:170321917:170328279:1 gene:Zm00001d051812 gene_biotype:protein_coding transcript_biotype:protein_coding description: histidine kinase6
Sequence	GCCCGCAGCCCGCTCTTCCCCGCTCCACCTCCAGGCTTCCAGTCTCTCACTCTCCCGCGC CTCTTGCTGCTGCTGCTGGCGATAGGGATCCCAGCGCCTTCAAGTTCGGGTGGGCGGCTA GCGCGGCGCGTGTCGGCGAGCATATGGTGGGCATTGGGCGGGGGAAGGAGGAGGAGGAGC GGCAATAGATTTGTGGGCGCAGAGGCGGGGATGGGGGGCAACAAGTACTGCGCGGCGATG ACGAAGAGGAGATGGAGGGGGCTGGCAGCGGCCGCGTGGGTGCTAGTCGCGGTGGCTTGC TCCGCGGTGATGCACTGGACCATGCGCCGGGAGAGCATGGACCGCGCCGAGGAGCGCCTC GTCAGCATGTGCGAGGAGAGGGCCAGGATGCTGCAGGAGCAGTTCGGGGTCACCGTCAAC CACGTCCACGCGATCGCCATTCTCATCGCCACCTTCAACTACGATAAGTCCCCTTCCGCT ATCGACCAGGACACTTTTGCAAAATACACGGCAAGGACATCATTTGAGCGACCGCTACTC AATGGGGTGGCATATGCACAGCGTGTATTCCATCATGAGAGGGAAATGTTTGAAAGCCAG CAGGGATGGATTATGAATACAATGCAGCGGGAGCCTGCACCCCCGCAGGTTGAATATGCT CCAGTGATTTTCTCTCAGGATACTGTTTCCTACCTCGCACGCATTGACATGATGTCTGGA GAGGACCGAGAAAACATTTTGCGGGCCAGGACTACTGGCAAAGCTGTGTTAACAAACCCA TTTCGGTTGCTTGGATCAAACCACTTGGGAGTAGTTCTCACTTTTGCTGTGTACCGCCCT GATCTCCCCGCTGATGCATCAGTTGAGCAACGTGTGGAAGCAACTATTGGATATCTTGGT GGAGCGTTTGATGTGGAGTCACTTGTGGAGAATTTGCTGAGCAAACTTGCTGGCAATCAG GATATTGTGGTGAATGTCTATGATGTCACAAATGCTTCAGAGGCTATGGTTTTGTATGGA CCTTCTAGTTCGGATGAGCGCGTGCCTTTCTTGCATGTTAGCATGTTGGATTTTGGAGAT CCGTTTAGGAGGCATGAAATGAGGTATAGACAAAAGCTTCCTATGCAGTGGTCTGCCATA ACCAATCCTTTGGGCACATTTGTCATATGGATGCTTCTGGGGTATAGCATTGCCGCTGCA TATTCTCGATATGACAAAGTTACAGAAGATTGTAGAAAGATGGAAGAGCTAAAAACGCAG GCAGAAGCTGCTGATGTTGCAAAGTCTCAGTTCCTGGCAACTGTGTCACATGAGATCAGA ACACCTATGAATGGCGTCCTTGGAATGCTGGATATGCTTTTAGGAACAGATCTAACTATG ACACAGAAGGATTATGCTCAAACTGCTCAAATGTGTGGCAGAGCATTGATAACGTTGATA AATGATGTCCTTGATCGAGCAAAGATTGAAGCTGGAAAGTTAGAGCTTGAAGCGGTGCCT TTTGACCTGCGTTCTCTCATGGATGATGTTATTTCCTTATTTTCTTCAAAGTCACGGGAG AAGTGCATTGAGCTTGCAGTATTTGTATGTGACAATGTTCCGAAGGATGTTCTTGGAGAT CCTTGGAGGTTTCGGCAGATACTAACAAATTTGGTCGGCAATGCAGTCAAATTCACAGAA CGGGGTCATGTATTTGTGCGGGTCTGTTTGGCTGATAACTCAAATATGGAAGCCGGTCAG GTCCTAAATGGAGCCATGAATGGGAAAGATGGTAGAGTTGATTCAACAACTAATGGTGCC TTCAATACTCTGAGTGGGTTTGAAGCAGCAGACAGACGAAATAGTTGGCAATATTTTAAG ATGCTCCTCTCTGATAAGGAGTCCCTTTTGGATGATCTTGAGGGAACAAATTCTGATCAA AGTGATTCAGACCATGTCACACTAGCGATAAGTATTGAGGACACAGGTGTTGGGATACCA TTGCAAGCACAAGATCGTGTTTTTACACCGTTTATGCAGGCTGATAGTTCAACTTCAAGG AATTATGGTGGTACTGGCATCGGTTTAAGCATTAGCAAGTGCCTAGCTGAACTTATGGGT GGGCAGATAAGTTTTGTCAGCCGTCCTTTTGTTGGAAGTACATTCACTTTCTCCACCACA CTGAAGCGCTCATACAAAGATATTTCAGTTGATTCAAGTAGGAGCTTGTTAGAGGCACTA CCAACTGCTTTTAAGGGAATGAAGGCCATCTTGATAGATGGGAGACCTGTACGTAGTGCT GTTACAAGATATCACCTCAAGAGGTTGGGAATAATTGTTCAAGTTGTGAACAATATGAGT GCAGTAGTAAAAGCTTTCCCTGGACAAAATGGAGCAACTGTTTCTAGGGAAAAGGCAACC ATTCTTTTTATTGAGAGTGACTTTTGGAGGCCCGAGACAGATGTTCAGTTATTGAACCAT CTACGCGAGCACAAGAATCGTCAGTTGTCTGATGGGCATAAGGTAGTTCTTTTGGTCACC TCCGAAGCTGATAAGGACAAGTATGGATCCATATTTGATATTGTGATGTGCAAGCCTATA AGGGCAAGCATGATTGCTTCATCTATTCAACAACTGCTCAAAGTAGAGATGCCTGAAAGA AGAAATAATCATAATCGGCCATCATTTCTTCGCAGCCTGCTGGTTGGGAAGAATATATTG GTAGTAGATGATAATAAAGTCAATCTTAGAGTCGCTGCAGCTGCACTCAAAAAGTACGGT GCTAATGTTAGCTGTGTTGAGAGTGGCAAAGATGCTATCAGTCTACTTCAACCCCCACAT TGCTTTGACGCATGTTTTATGGATGTTCAGATGCCAGAGATGGATGGGTTTGAGGCAACA AGACAAATAAGGCAAACAGAGATGAGAGTTAACGAGGAAAGGAAGAATAAGTTGGTGTTG ATTGAAGGCTCAACATTTGTTGAGTACCATTTGCCTGTTTTGGCGATGACAGCCGATGTT ATCCAGGCAACTTACGAGAAGTGTATAAAATCGGGAATGGATGGATACGTGTCTAAACCC TTCGACGAGGAGCAGCTATACCAAGCAGTCTCCAGATTAATAGTGGGAACGACAGATTCG ACTGTTTAATATTTAGATGGCTATGAATCTGATTTCTCATTCATCGAATTGAAGCACACC ACCATGTTGCTTCTGTCCAAGTTTGACTCTAACCCTTAACAATTGTCTGACCTGGCCTCT CGCAGCACTAGATGAAAAGGATGAAAGTGCCACGAGTTGGCTATGTATCAGCACCACAGA TGAAGTTGCCTCACCCCGGAGTGTAGGTTGGTAG