Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d051760_T005
CDS Infomation

cds chromosome:B73_RefGen_v4:4:168956390:168959054:-1 gene:Zm00001d051760 gene_biotype:protein_coding transcript_biotype:protein_coding description:Fcf2 pre-rRNA processing protein
Sequence

ATGCCGGAGACGGCGGCGCCGATCGGCCTCTCATGGGCGCCCAAGCTTCCTTCCTTCGCA
ACGACCAGCGGCGGCAGCAAGAGCGACCACGCGCCGAACCCGAGCGCTGCGCAGGGATCG
CTCTGGAACCGCGCGAGCGACCTCGTGGACGGGCTGTTCGTTGCCCCGAGGGACCCTAGG
CAGCTGAATAAGCTGGCCAGGAAGAACGTCAAGGACACTGCCGGCAAGGGCTGGTTCGAC
ATGCCAGCTCCGACCATCACTCCCGAGTTGAAGAAGGATCTCGAGATTTTGCAGCTGAGG
CATGTAATTGACCCAAAAAGGCACTTCAAGCGGGCAGGAAAATCCAAGGCCCTTCCCAAG
TACTTCCAAGTCGGTACGGTCGTTGAGCCTGCATCTGAGTTCTACTCAAGTAGGCTGAAA
AATAGGGAACGCAAGGCAACATTGGTTGACGAGCTGTTATCAGATCAATCTCTGAAGAGC
TACAGGATGCGCAAGGTACGTGAAATTCAGGAGATCCGTACACCAGGAGGCAACCAAAAG
TGGAAGAACAAGGGCAAGAAAACGCTCAAGAGGGCCAAGGATAGGAGGAAATGA

Peptide Sequence

PEP ID

Zm00001d051760_P005
PEP Infomation

pep chromosome:B73_RefGen_v4:4:168956390:168959054:-1 gene:Zm00001d051760 transcript:Zm00001d051760_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Fcf2 pre-rRNA processing protein
Sequence

MPETAAPIGLSWAPKLPSFATTSGGSKSDHAPNPSAAQGSLWNRASDLVDGLFVAPRDPR
QLNKLARKNVKDTAGKGWFDMPAPTITPELKKDLEILQLRHVIDPKRHFKRAGKSKALPK
YFQVGTVVEPASEFYSSRLKNRERKATLVDELLSDQSLKSYRMRKVREIQEIRTPGGNQK
WKNKGKKTLKRAKDRRK

Transcript Sequence

Transcript ID

Zm00001d051760_T005
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:168956390:168959054:-1 gene:Zm00001d051760 gene_biotype:protein_coding transcript_biotype:protein_coding description:Fcf2 pre-rRNA processing protein
Sequence

GAAACCTCTGAAATGACGGCCCATATTGCTCAAGCTTGCTAAACCTCCTGCTGTCCTGCC
CTAGTGCTCCTCTCCTGTTGTTTCCCGGCCCCCTCCTTCCTCCCACGGTCCCACCATCCC
AGGGCCGCCGCGCTGCTTCTCTTTCCCGTCGCACCTCCAACGCTGCCGCCGCGGCAGATT
AATCCAACACCGGGCCGGGATACGTGACAGGTTTCTGAGCTCGCAGCTCTACGCCAGCGA
TGCCGGAGACGGCGGCGCCGATCGGCCTCTCATGGGCGCCCAAGCTTCCTTCCTTCGCAA
CGACCAGCGGCGGCAGCAAGAGCGACCACGCGCCGAACCCGAGCGCTGCGCAGGGATCGC
TCTGGAACCGCGCGAGCGACCTCGTGGACGGGCTGTTCGTTGCCCCGAGGGACCCTAGGC
AGCTGAATAAGCTGGCCAGGAAGAACGTCAAGGACACTGCCGGCAAGGGCTGGTTCGACA
TGCCAGCTCCGACCATCACTCCCGAGTTGAAGAAGGATCTCGAGATTTTGCAGCTGAGGC
ATGTAATTGACCCAAAAAGGCACTTCAAGCGGGCAGGAAAATCCAAGGCCCTTCCCAAGT
ACTTCCAAGTCGGTACGGTCGTTGAGCCTGCATCTGAGTTCTACTCAAGTAGGCTGAAAA
ATAGGGAACGCAAGGCAACATTGGTTGACGAGCTGTTATCAGATCAATCTCTGAAGAGCT
ACAGGATGCGCAAGGTACGTGAAATTCAGGAGATCCGTACACCAGGAGGCAACCAAAAGT
GGAAGAACAAGGGCAAGAAAACGCTCAAGAGGGCCAAGGATAGGAGGAAATGAGACTGGC
GTGCTAGCCTTGTGGTCCAGTTGTGAGAGAACAGATTGGAGAAGTGAACCAAGGAGCGCC
TTCAAATACCCCCTCTCTCGATTTGTGCGGGGTATATAGATTCTGGTTCCAGTGTAGTGT
GATGAACTTCAGTAACATGATGAATTGCTTTAGATACTTCAAAAATGTTGCTGTAACA