Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d051693_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:4:166937912:166939656:-1 gene:Zm00001d051693 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aspartyl protease AED1
Sequence

ATGGCATCTATTTCTAAGTTTCTACTTGCACTGTTGTTCAGCTATCACACCCTCATTGCT
CACGCAGCAGACGATCGCCGCCACAAGGTTCTGTCCGTTGGCTCTCTGATGAAGTCTTCC
ACAGCATGCTCCGAGCCCAAAGTGACTCCACCATCCACCGGCGTCACGGTGCCGTTGCAC
CACCGGTACGACCCATGCTCGCCTGTACCCTCCAAGAAGGTGCCCACCTTGGAGGAGCGG
CTCCGGCGCGACCAGCTTCGAGCCGCCTACATCAAACGGAAGTTCTCTGGCGCCGGCGAC
ATCGAGCAATCGGACGCCGCTACCGTGCCGACCACGCTGGGCACCTCCCTGAGCACGTTG
GAGTACGTGATCACCGTCGGCATCGGCTCGCCGGCCGTGACCCAGACCATGTCCATGGAC
ACCGGCAGCGACGTGTCGTGGGTGCAGTGCAAGCCGTGTTCGCAGTGCCACTCCGAGGTG
GACTCGCTCTTCGACCCCAGCTCGTCGAGCACCTACTCGCCCTTCTCCTGCAGCTCCGCC
CCCTGCGCGCAGCTCAGCCAGAGCCAGGAGGGGAACGGGTGCATGAGCTCCCAGTGCCAG
TACATCGTCAACTACGGCGATAGCTCGAGCACGACCGGGACCTACAGCTCCGACACGCTC
ACGCTTGGCTCCAGCGCCATGACGGACTTCCAGTTCGGGTGCAGCCAGTCGGAGTCCGGC
GGCTTCAACGACCAAACCGACGGGCTCATGGGGCTCGGCGGCGGCGCGCAGTCTCTCGCG
TCCCAGACGGCGGGGACCTTTGGCACGGCCTTCTCTTACTGCCTCCCGCCAACTTCGGGT
TCGTCCGGATTCCTCACTCTTGGAACGGGAAGTTCGGGTTTCGTGAAGACGCCGATGCTC
AGGAGCACCCAGATCCCGACCTACTACGTCGTGCTCCTTGAGTCCATCAAGGTGGGAAGT
CAGCAGCTCAACCTACCTACCTCGGTCTTCTCCGCCGGGTCGCTCATGGACTCCGGTACA
ATCATCACGAGGCTGCCGCCGACGGCCTACTCGGCGCTGTCGTCGGCGTTCAAGGCCGGG
ATGCAGCAGTACCCGCCGGCAACGCCCAGCGGCATCCTCGACACGTGCTTCGACTTCAGT
GGCCAGTCCAGCATCAGCATACCGACCGTCACACTGGTGTTCTCCGGGGGCGCGGCCGTC
GACCTCGCCTTCGACGGGATCATGCTGGAGATCAGCAGCAGCATCCGCTGCCTCGCCTTC
ACGCCCAACGGGGACGACAGCTCCCTCGGCATCATCGGCAACGTGCAACAGCGGACGTTC
GAGGTGCTGTACGACGTCGGCGGTGGCGCTGTCGGGTTCAAGGCTGGGGCTTGCTGA

Peptide Sequence

PEP ID

Zm00001d051693_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:4:166937912:166939656:-1 gene:Zm00001d051693 transcript:Zm00001d051693_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aspartyl protease AED1
Sequence

MASISKFLLALLFSYHTLIAHAADDRRHKVLSVGSLMKSSTACSEPKVTPPSTGVTVPLH
HRYDPCSPVPSKKVPTLEERLRRDQLRAAYIKRKFSGAGDIEQSDAATVPTTLGTSLSTL
EYVITVGIGSPAVTQTMSMDTGSDVSWVQCKPCSQCHSEVDSLFDPSSSSTYSPFSCSSA
PCAQLSQSQEGNGCMSSQCQYIVNYGDSSSTTGTYSSDTLTLGSSAMTDFQFGCSQSESG
GFNDQTDGLMGLGGGAQSLASQTAGTFGTAFSYCLPPTSGSSGFLTLGTGSSGFVKTPML
RSTQIPTYYVVLLESIKVGSQQLNLPTSVFSAGSLMDSGTIITRLPPTAYSALSSAFKAG
MQQYPPATPSGILDTCFDFSGQSSISIPTVTLVFSGGAAVDLAFDGIMLEISSSIRCLAF
TPNGDDSSLGIIGNVQQRTFEVLYDVGGGAVGFKAGAC

Transcript Sequence

Transcript ID

Zm00001d051693_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:166937912:166939656:-1 gene:Zm00001d051693 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aspartyl protease AED1
Sequence

AACTTACTCCATCCTCAGACCGAGAAGAAAGAAATAACGGCACACCGTACCATGGCATCT
ATTTCTAAGTTTCTACTTGCACTGTTGTTCAGCTATCACACCCTCATTGCTCACGCAGCA
GACGATCGCCGCCACAAGGTTCTGTCCGTTGGCTCTCTGATGAAGTCTTCCACAGCATGC
TCCGAGCCCAAAGTGACTCCACCATCCACCGGCGTCACGGTGCCGTTGCACCACCGGTAC
GACCCATGCTCGCCTGTACCCTCCAAGAAGGTGCCCACCTTGGAGGAGCGGCTCCGGCGC
GACCAGCTTCGAGCCGCCTACATCAAACGGAAGTTCTCTGGCGCCGGCGACATCGAGCAA
TCGGACGCCGCTACCGTGCCGACCACGCTGGGCACCTCCCTGAGCACGTTGGAGTACGTG
ATCACCGTCGGCATCGGCTCGCCGGCCGTGACCCAGACCATGTCCATGGACACCGGCAGC
GACGTGTCGTGGGTGCAGTGCAAGCCGTGTTCGCAGTGCCACTCCGAGGTGGACTCGCTC
TTCGACCCCAGCTCGTCGAGCACCTACTCGCCCTTCTCCTGCAGCTCCGCCCCCTGCGCG
CAGCTCAGCCAGAGCCAGGAGGGGAACGGGTGCATGAGCTCCCAGTGCCAGTACATCGTC
AACTACGGCGATAGCTCGAGCACGACCGGGACCTACAGCTCCGACACGCTCACGCTTGGC
TCCAGCGCCATGACGGACTTCCAGTTCGGGTGCAGCCAGTCGGAGTCCGGCGGCTTCAAC
GACCAAACCGACGGGCTCATGGGGCTCGGCGGCGGCGCGCAGTCTCTCGCGTCCCAGACG
GCGGGGACCTTTGGCACGGCCTTCTCTTACTGCCTCCCGCCAACTTCGGGTTCGTCCGGA
TTCCTCACTCTTGGAACGGGAAGTTCGGGTTTCGTGAAGACGCCGATGCTCAGGAGCACC
CAGATCCCGACCTACTACGTCGTGCTCCTTGAGTCCATCAAGGTGGGAAGTCAGCAGCTC
AACCTACCTACCTCGGTCTTCTCCGCCGGGTCGCTCATGGACTCCGGTACAATCATCACG
AGGCTGCCGCCGACGGCCTACTCGGCGCTGTCGTCGGCGTTCAAGGCCGGGATGCAGCAG
TACCCGCCGGCAACGCCCAGCGGCATCCTCGACACGTGCTTCGACTTCAGTGGCCAGTCC
AGCATCAGCATACCGACCGTCACACTGGTGTTCTCCGGGGGCGCGGCCGTCGACCTCGCC
TTCGACGGGATCATGCTGGAGATCAGCAGCAGCATCCGCTGCCTCGCCTTCACGCCCAAC
GGGGACGACAGCTCCCTCGGCATCATCGGCAACGTGCAACAGCGGACGTTCGAGGTGCTG
TACGACGTCGGCGGTGGCGCTGTCGGGTTCAAGGCTGGGGCTTGCTGATCGGCAGGCGCC
AGCCGCCAACAAGGACACACTGACGTCATGGGGTTCACGAGTTTTTGTTGGCTGCGAGGT
AGGAGTAAACAGACACGAAAGGGAGGCCATTACCTATAGTACTTCAATTTTGATTGTTTT
TGTGCTTGCAAACCATGCAAGTGTGCAATATAATTGTAATTTTATCCTCAAATTTATGAA
TACACAATAATAATATAATAAGTTGCTT