Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d051678_T028
CDS Infomation	cds chromosome:B73_RefGen_v4:4:166471372:166480977:-1 gene:Zm00001d051678 gene_biotype:protein_coding transcript_biotype:protein_coding description:WD40%2C G-beta domain containing family protein%2C family
Sequence	ATGACGTCTCCGAGCGAAAACCCTAACCCTAATCCTAATACACCATTTGAGATCGGGAAG CTTTTCAGGCCAACGAATCCCATGCCCAACGCCACCCCCAACCCCATCTTCCCCGGCGTC GCTGGAGGCCCGGCGCCATCCGGCCCCTACTCCTACCCTCCGGTGACCCCGCCCTTCCAC CGCGGACCCTACATCCACTACCCGCAGGACCCCCACGCCATGACCCGCCCAGTTGTCTCC TTCCCCATGCCAAACCCAAACCTCAACCCCAACCCGAACGCTAACCCCAACGCCGTCGCC CCGGGCCCCAACCCCGGCGCGCGCCTCATGCAGCTGCTCGGGAACTCCGGGCCGACACAA TTCGAGACCGCCGTCTCCATGCCCCCGCCCACATCGGAATTCGCACAACTGCAGTTGCTC CCAGCGATGCCATCCGCGCCGCCGGCCAGGATGCTGAGCAGCACCAGCAGCAAGGTGCCC AGGGGGCGGTTACTTGGCACCGGGGAACGAGCGGTGCACGATGTTGACTCGAGGCTGCCC GGGGAAGCGCAGCCACCGCAGCTGGAGGTAACACCGATTACCAAGTACACATCGGATCCC GGGCTCGTGCTGGGCAGACAGATCGCTGTGAACCGGACGTACATCGTGTATGGCCTCAAG CTCGGTAACATCCGTGTGCTGAACATCAACACCGCACTCCGTTCACTCCTCCGTGGTCAC ACACAGAGGGTGACAGACATGGCTTTCTTTGCTGAGGATGTCCATCGTTTGGCAAGTGCG AGCGTAGATGGGCGGATATTTGTGTGGAGGATAGATGAAGGGCCCGATGAGGAAAACAAA CCACAAATTACTGGAAAGATTGAAATCGCCATCCAGATTGTAGGTGAAGCTGAAGCTTAC CATCCAAGGATATGTTGGCACTCACATAAGCAAGAGATTCTTTTTGTTGGGATTGGGAAC TGTGTCTTAAGAATAGACACAACTAAAGTGGGTAGAGGAAAAGACTTTACTGTGGAAGGA CCTGTAAAATGTCATCTTGAAAAGCTTATTGATGGTGTCCGCTTAGTTGGTAAGCATGAT GGTGGTGTGACTGATTTGTCCATATCTCAATGGATGAGCACCCGCCTGGCTTCCGGATCC AAGGATGGCACGGTTAAAATCTGGGATGATCGCAAGCAAGTGCCATTATCTATTTTTAAG CCCCATGATGGTCAAGCGGTTTATTCAGTTGCTTTTCTTACAGCGCCTGAACGACCAAAT CATATTAATCTAATAACTGCGGGTCCTGTTAACCGAGAAGTTAAAATTTGGGCTTCTACT AATGAAGATGGCTGGTTGTTGCCAAGTGATTCTGAGACTTGGAAGTGCACTCAGACTTTG GAACTTGTTAGCTCTCTGGAACCTAGAGTTGAAGAGGCATTTTTCAACCAGGTTGCAGTG CTGCATCAAGCTAGCCTGATTTTGCTTGCGAATGCTAAAAAGAATTCTATTTATGCCGTG CATGTTGAGTATGGCCCAGATCCTGCCTCTACTCGATTAGACTATATAGCTGATTTCACA GTTGCAATGCCTATTTTAAGCCTAACTGGAACACACGAAAGCCAACCTGATGGTGAACAA GTTGTTCAAGTCTATTGTGTTCAAACTATGGCCATTCAGCAATATGGTCTAGAGTTATCA CTCTGTTCGCCTCCTACAGCTGATAGTACTGGGTTTGGTAGAGATCCTGCTATTTCCCGT GTTTATGAGGCAGCTCTGGAAATGGCAGGAACAGAGCCATCTATAGGAACTAGTTGCACA GACTCTTACTCTGTCACTGCTTTGAGTAAACAACCAAATGTTGACCAGTCTGCAGAGCTT GATCTGAAACCATCAGCTCCACCGCTTGCATACTCAGAAGGTGATAGTTCCATGCCTCTT CCATTTACAGCTCTTGCACCTAAGATTGAGGTTCCTGGATCAGGACCAGCACCTGGAACT CGTGATATAGAGCAATCAGCTTTTAACTATACGAATACGACAAACAGAAACATGGAGCGT GATGCTCTGAAAAGACAAGATACCCCGATGCCCATTAGAAAGGATATCTTAGGAAAAGAT GAGCCAAGAGATGGTCAAAGTAATGTTCCAATGCTTCCAAATCCCCATATGGTGTTTCAA GTTGGAGGGAATGCTACACGCTTGGTTACTCCATCTGAAATAATATCGGGTACTCTCTCA TCTGCTGAAAACAATGATGTTTCTGAATCTGGTGGGGAAAATCGAGATGTTTCCAGCGGA AGTTCTTGGGTTGCAGAAGTGGAACCAAAGCATATTGATGAGAGTAAACCAGATCAAAAC TTGGGACTTGAAGCAGTCAAGGAAACTCAGATTGTTTGTGAGAACATGGCGAAAACTTCC ATGGAGCAAACTGTTGAAATGATCACTAAGCGCTCAGTTACAACTGATAAGCACAGTGTG GAAGAATCACAGTCATCATCTGATCGACCAGCATCAGATCAGACTTGTGGCACTGATGAA AATGTTCTGAAGAAGTTTGTGGAAATGCCTGAGAAAATTGATTACTCTGCTTCCAGGGAG CAACCATCTTTGTTTACAAAAGAGAAAGTTTTGCACCCTCAAACATCTGGTCAGCCATCT CCTCCTGTGAGTGCTTTCAATTCAACTGAGCCACATGAGCCTTTGAGCTCTACATACCTA CCTGTCAGCTCCTTCCCAGAAGATGCTGCCACACAAGGAATGCTGCAACAGCTCTTGGAT CACCAGAAGGACATGGAAAAGCAGCTGAGTACTGTGGTTCCTGTGTCCATCGCAAAGGAG GGCAAAAGACTTGAGACATTATTAGGGCGCACTGTAGAGAAATCATTCAAGGCTAATATT GATGCGTTTTGGGTTCGTCTCCAGGAGGAAAACACTAAGCGTGAAAAGGCTGATAGAGAG CGAATGCAGCAACTGTGTACTCTCATTACAAGCTCAATAAATAAGGACTTACCTTCTAAT CTGGAGAAGTCACTTAAGAAAGAAATTTCTTCACTCGGGCCTGTTGTTGCTCGCGCAATT ACACCTGTTGTTGAGAAGTCCATAACCTCTGTTGTTTCTGATTCAGTTCAGAAAGGGGTG GGTGACAAGGTGTGCAATCAGCTGGAGAAGTCTATTACTGGAAAACTTGAAGCTACGCTT GCCAAGCAAATCCAAATGCAGTTCCATACATCTGGAAGACAGGCTCTTCAGGATGCTTTG CGTACTAGCTTTGAATCATTGCTTGTTCCAGCATTTGAGCAAGCATGCAAGACAATGTTT GAGCAAGTAGATGGTGCATTTCAAAAGGGAATGTCTGAGCACTCCAATGCTATTCAGCAG CAAGTTGAGGCTGCACATACTCCGTTAGCGCTAACTCTAAAAGAAACCATCAATTCTGCT TCATCAATCACCCAGAGTTTTTCATCGGAGTTACTTGATGGCAATCGCAAGCTATTGGCA CTTGTTACTTCTGGGAATGCCAAGGCACATAATACCAGTGCTTTGCAGCCCATTAATGGT CCTATGGGTGGTCCCCAAGAGGTTGAGGCTCCGTTAGATCCGATGAGAGAGCTGAGCAGA CTGATATCTGAACGCAAGTTTGACGAAGCATTTACAATGGCTCTTCAAAGGAGTGATGTT TCCATAGTGTCGTGGCTGTGCTCCCAGGTTGATTTGCGGGCACTATGTGCAATGGTTCCA GTACCTCTTAACCAGGGGGTCCTTCTGGCCTTATTGCAGCAGCTAGCAATTGACATTCAC AATGAGACATCACGGAAGGTTCAATGGATGACAGATGTTGCCATGGCAATCAACCCAGCA GACCAGATCATCGCGGTGCATGTGCGACCAATCTTTGAGCAAGTCTACAGCCAATTGGCC CACCAACGGACACTCCCCACCACGACCGCATCAGATGGCACCAGTATCCGTGTGATCATG CATGTAATTAACTCGGTTCTGCTTAGCTACAAGTGA

Peptide Sequence

PEP ID	Zm00001d051678_P028
PEP Infomation	pep chromosome:B73_RefGen_v4:4:166471372:166480977:-1 gene:Zm00001d051678 transcript:Zm00001d051678_T028 gene_biotype:protein_coding transcript_biotype:protein_coding description:WD40%2C G-beta domain containing family protein%2C family
Sequence	MTSPSENPNPNPNTPFEIGKLFRPTNPMPNATPNPIFPGVAGGPAPSGPYSYPPVTPPFH RGPYIHYPQDPHAMTRPVVSFPMPNPNLNPNPNANPNAVAPGPNPGARLMQLLGNSGPTQ FETAVSMPPPTSEFAQLQLLPAMPSAPPARMLSSTSSKVPRGRLLGTGERAVHDVDSRLP GEAQPPQLEVTPITKYTSDPGLVLGRQIAVNRTYIVYGLKLGNIRVLNINTALRSLLRGH TQRVTDMAFFAEDVHRLASASVDGRIFVWRIDEGPDEENKPQITGKIEIAIQIVGEAEAY HPRICWHSHKQEILFVGIGNCVLRIDTTKVGRGKDFTVEGPVKCHLEKLIDGVRLVGKHD GGVTDLSISQWMSTRLASGSKDGTVKIWDDRKQVPLSIFKPHDGQAVYSVAFLTAPERPN HINLITAGPVNREVKIWASTNEDGWLLPSDSETWKCTQTLELVSSLEPRVEEAFFNQVAV LHQASLILLANAKKNSIYAVHVEYGPDPASTRLDYIADFTVAMPILSLTGTHESQPDGEQ VVQVYCVQTMAIQQYGLELSLCSPPTADSTGFGRDPAISRVYEAALEMAGTEPSIGTSCT DSYSVTALSKQPNVDQSAELDLKPSAPPLAYSEGDSSMPLPFTALAPKIEVPGSGPAPGT RDIEQSAFNYTNTTNRNMERDALKRQDTPMPIRKDILGKDEPRDGQSNVPMLPNPHMVFQ VGGNATRLVTPSEIISGTLSSAENNDVSESGGENRDVSSGSSWVAEVEPKHIDESKPDQN LGLEAVKETQIVCENMAKTSMEQTVEMITKRSVTTDKHSVEESQSSSDRPASDQTCGTDE NVLKKFVEMPEKIDYSASREQPSLFTKEKVLHPQTSGQPSPPVSAFNSTEPHEPLSSTYL PVSSFPEDAATQGMLQQLLDHQKDMEKQLSTVVPVSIAKEGKRLETLLGRTVEKSFKANI DAFWVRLQEENTKREKADRERMQQLCTLITSSINKDLPSNLEKSLKKEISSLGPVVARAI TPVVEKSITSVVSDSVQKGVGDKVCNQLEKSITGKLEATLAKQIQMQFHTSGRQALQDAL RTSFESLLVPAFEQACKTMFEQVDGAFQKGMSEHSNAIQQQVEAAHTPLALTLKETINSA SSITQSFSSELLDGNRKLLALVTSGNAKAHNTSALQPINGPMGGPQEVEAPLDPMRELSR LISERKFDEAFTMALQRSDVSIVSWLCSQVDLRALCAMVPVPLNQGVLLALLQQLAIDIH NETSRKVQWMTDVAMAINPADQIIAVHVRPIFEQVYSQLAHQRTLPTTTASDGTSIRVIM HVINSVLLSYK

Transcript Sequence

Transcript ID	Zm00001d051678_T028
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:166471372:166480977:-1 gene:Zm00001d051678 gene_biotype:protein_coding transcript_biotype:protein_coding description:WD40%2C G-beta domain containing family protein%2C family
Sequence	ACCCCCTTCCACGGCACCTCCAGTCCACTTCGTCTTCCTCTCTTCCCCAGTTCAGATCTA CTCCATTGCCACCTTCCTCTCCCGGCCGCTTCTCATGACGTCTCCGAGCGAAAACCCTAA CCCTAATCCTAATACACCATTTGAGATCGGGAAGCTTTTCAGGCCAACGAATCCCATGCC CAACGCCACCCCCAACCCCATCTTCCCCGGCGTCGCTGGAGGCCCGGCGCCATCCGGCCC CTACTCCTACCCTCCGGTGACCCCGCCCTTCCACCGCGGACCCTACATCCACTACCCGCA GGACCCCCACGCCATGACCCGCCCAGTTGTCTCCTTCCCCATGCCAAACCCAAACCTCAA CCCCAACCCGAACGCTAACCCCAACGCCGTCGCCCCGGGCCCCAACCCCGGCGCGCGCCT CATGCAGCTGCTCGGGAACTCCGGGCCGACACAATTCGAGACCGCCGTCTCCATGCCCCC GCCCACATCGGAATTCGCACAACTGCAGTTGCTCCCAGCGATGCCATCCGCGCCGCCGGC CAGGATGCTGAGCAGCACCAGCAGCAAGGTGCCCAGGGGGCGGTTACTTGGCACCGGGGA ACGAGCGGTGCACGATGTTGACTCGAGGCTGCCCGGGGAAGCGCAGCCACCGCAGCTGGA GGTAACACCGATTACCAAGTACACATCGGATCCCGGGCTCGTGCTGGGCAGACAGATCGC TGTGAACCGGACGTACATCGTGTATGGCCTCAAGCTCGGTAACATCCGTGTGCTGAACAT CAACACCGCACTCCGTTCACTCCTCCGTGGTCACACACAGAGGGTGACAGACATGGCTTT CTTTGCTGAGGATGTCCATCGTTTGGCAAGTGCGAGCGTAGATGGGCGGATATTTGTGTG GAGGATAGATGAAGGGCCCGATGAGGAAAACAAACCACAAATTACTGGAAAGATTGAAAT CGCCATCCAGATTGTAGGTGAAGCTGAAGCTTACCATCCAAGGATATGTTGGCACTCACA TAAGCAAGAGATTCTTTTTGTTGGGATTGGGAACTGTGTCTTAAGAATAGACACAACTAA AGTGGGTAGAGGAAAAGACTTTACTGTGGAAGGACCTGTAAAATGTCATCTTGAAAAGCT TATTGATGGTGTCCGCTTAGTTGGTAAGCATGATGGTGGTGTGACTGATTTGTCCATATC TCAATGGATGAGCACCCGCCTGGCTTCCGGATCCAAGGATGGCACGGTTAAAATCTGGGA TGATCGCAAGCAAGTGCCATTATCTATTTTTAAGCCCCATGATGGTCAAGCGGTTTATTC AGTTGCTTTTCTTACAGCGCCTGAACGACCAAATCATATTAATCTAATAACTGCGGGTCC TGTTAACCGAGAAGTTAAAATTTGGGCTTCTACTAATGAAGATGGCTGGTTGTTGCCAAG TGATTCTGAGACTTGGAAGTGCACTCAGACTTTGGAACTTGTTAGCTCTCTGGAACCTAG AGTTGAAGAGGCATTTTTCAACCAGGTTGCAGTGCTGCATCAAGCTAGCCTGATTTTGCT TGCGAATGCTAAAAAGAATTCTATTTATGCCGTGCATGTTGAGTATGGCCCAGATCCTGC CTCTACTCGATTAGACTATATAGCTGATTTCACAGTTGCAATGCCTATTTTAAGCCTAAC TGGAACACACGAAAGCCAACCTGATGGTGAACAAGTTGTTCAAGTCTATTGTGTTCAAAC TATGGCCATTCAGCAATATGGTCTAGAGTTATCACTCTGTTCGCCTCCTACAGCTGATAG TACTGGGTTTGGTAGAGATCCTGCTATTTCCCGTGTTTATGAGGCAGCTCTGGAAATGGC AGGAACAGAGCCATCTATAGGAACTAGTTGCACAGACTCTTACTCTGTCACTGCTTTGAG TAAACAACCAAATGTTGACCAGTCTGCAGAGCTTGATCTGAAACCATCAGCTCCACCGCT TGCATACTCAGAAGGTGATAGTTCCATGCCTCTTCCATTTACAGCTCTTGCACCTAAGAT TGAGGTTCCTGGATCAGGACCAGCACCTGGAACTCGTGATATAGAGCAATCAGCTTTTAA CTATACGAATACGACAAACAGAAACATGGAGCGTGATGCTCTGAAAAGACAAGATACCCC GATGCCCATTAGAAAGGATATCTTAGGAAAAGATGAGCCAAGAGATGGTCAAAGTAATGT TCCAATGCTTCCAAATCCCCATATGGTGTTTCAAGTTGGAGGGAATGCTACACGCTTGGT TACTCCATCTGAAATAATATCGGGTACTCTCTCATCTGCTGAAAACAATGATGTTTCTGA ATCTGGTGGGGAAAATCGAGATGTTTCCAGCGGAAGTTCTTGGGTTGCAGAAGTGGAACC AAAGCATATTGATGAGAGTAAACCAGATCAAAACTTGGGACTTGAAGCAGTCAAGGAAAC TCAGATTGTTTGTGAGAACATGGCGAAAACTTCCATGGAGCAAACTGTTGAAATGATCAC TAAGCGCTCAGTTACAACTGATAAGCACAGTGTGGAAGAATCACAGTCATCATCTGATCG ACCAGCATCAGATCAGACTTGTGGCACTGATGAAAATGTTCTGAAGAAGTTTGTGGAAAT GCCTGAGAAAATTGATTACTCTGCTTCCAGGGAGCAACCATCTTTGTTTACAAAAGAGAA AGTTTTGCACCCTCAAACATCTGGTCAGCCATCTCCTCCTGTGAGTGCTTTCAATTCAAC TGAGCCACATGAGCCTTTGAGCTCTACATACCTACCTGTCAGCTCCTTCCCAGAAGATGC TGCCACACAAGGAATGCTGCAACAGCTCTTGGATCACCAGAAGGACATGGAAAAGCAGCT GAGTACTGTGGTTCCTGTGTCCATCGCAAAGGAGGGCAAAAGACTTGAGACATTATTAGG GCGCACTGTAGAGAAATCATTCAAGGCTAATATTGATGCGTTTTGGGTTCGTCTCCAGGA GGAAAACACTAAGCGTGAAAAGGCTGATAGAGAGCGAATGCAGCAACTGTGTACTCTCAT TACAAGCTCAATAAATAAGGACTTACCTTCTAATCTGGAGAAGTCACTTAAGAAAGAAAT TTCTTCACTCGGGCCTGTTGTTGCTCGCGCAATTACACCTGTTGTTGAGAAGTCCATAAC CTCTGTTGTTTCTGATTCAGTTCAGAAAGGGGTGGGTGACAAGGTGTGCAATCAGCTGGA GAAGTCTATTACTGGAAAACTTGAAGCTACGCTTGCCAAGCAAATCCAAATGCAGTTCCA TACATCTGGAAGACAGGCTCTTCAGGATGCTTTGCGTACTAGCTTTGAATCATTGCTTGT TCCAGCATTTGAGCAAGCATGCAAGACAATGTTTGAGCAAGTAGATGGTGCATTTCAAAA GGGAATGTCTGAGCACTCCAATGCTATTCAGCAGCAAGTTGAGGCTGCACATACTCCGTT AGCGCTAACTCTAAAAGAAACCATCAATTCTGCTTCATCAATCACCCAGAGTTTTTCATC GGAGTTACTTGATGGCAATCGCAAGCTATTGGCACTTGTTACTTCTGGGAATGCCAAGGC ACATAATACCAGTGCTTTGCAGCCCATTAATGGTCCTATGGGTGGTCCCCAAGAGGTTGA GGCTCCGTTAGATCCGATGAGAGAGCTGAGCAGACTGATATCTGAACGCAAGTTTGACGA AGCATTTACAATGGCTCTTCAAAGGAGTGATGTTTCCATAGTGTCGTGGCTGTGCTCCCA GGTTGATTTGCGGGCACTATGTGCAATGGTTCCAGTACCTCTTAACCAGGGGGTCCTTCT GGCCTTATTGCAGCAGCTAGCAATTGACATTCACAATGAGACATCACGGAAGGTTCAATG GATGACAGATGTTGCCATGGCAATCAACCCAGCAGACCAGATCATCGCGGTGCATGTGCG ACCAATCTTTGAGCAAGTCTACAGCCAATTGGCCCACCAACGGACACTCCCCACCACGAC CGCATCAGATGGCACCAGTATCCGTGTGATCATGCATGTAATTAACTCGGTTCTGCTTAG CTACAAGTGATTGCAGCTATGCAACTGTGGGAAGTATGGCCTATTTGATATCTTGTATAG AGAAATTTTGAATGGCAAATAGAACACAACCCACGAGA