Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d051671_T038
CDS Infomation

cds chromosome:B73_RefGen_v4:4:166250987:166260899:-1 gene:Zm00001d051671 gene_biotype:protein_coding transcript_biotype:protein_coding description:WD repeat-containing protein-like protein

Sequence

ATGAAGGATTGCAAGCCAACAGAGAAAGGTGGAATGTACTATGAGTTCAGACGAAATACT
CGATCGATTAAGTCAACTATTCTACATTTTCAGCTTCGAAATTTGGTATGGGCTACGTCC
AAGCATGACATCTACCTAGTATCACATTACTCAATTCGTCATTGGTCAGCATTGAGTGGT
GTCGATACTGAACTTATCAACGTCCAAGGACACGTGGCACCAAGGGAGAAGCATGCAGGA
AGTTTATCAGAGGGTTTTTATCAGACTCAAGTTAGTACCTTGGCAGTCAAGGACAATTTA
CTGGTAGCTGGTGGGTTTCAAGGAGAGCTGATCTGTAAACACCTTGATCGGGAAGGTATT
AGTTTTTGCTGTCGAACAACTTATGATGATAATGCTATTACAAATGCGGTTGAGATATTT
AATACCTCTAGTGGCGCTGTTCACTTCATCGCATCAAATAACGATTCTGGTGTGAGATAC
TATGACATGGAGAGATTCCAGCTATTCAAGCATTTGCAGTTTGAATGGCCAGTGAATCAT
GCTTCTTTGAGTCCTGACAGAAAGGTCGTTGTTATTGTCGGTGATGATCCTGATGGTCTA
CTTATTGATGCCAACTCTGGAAAGACACTCCATTCCATAAAAGGACATCGGGACTACTCA
TTTGCATCGGCTTGGAGCCCTGATGGGCGAACATTTGCTACTGGCAACCAAGACAAGACA
TGCCGAATCTGGGACGCGAGGAATCTCTCAAAATCCGTCCATGTGTTGAGGGGTAACCTT
GGAGCCATCCGGTCCATCCGCTTCACCTCGGATGGCCAGTTCATGTCCATGGCTGAACCT
GCTGACTTTGTGCACGTCTACGACGTGAAGAGTGACTACAACAAAAGGCAGGAGCTGGAC
TTCTTTGGCGAGATATCCGGCACATCGTTCAGCCCAGACACTGACGCGCTTTTCGTTGGC
GTGTGGGATAGGATGTATGGCAGCCTGCTTCAGTTTGGCCGCCTGTACAACTACTCGTAT
CTTGACTCCGTGTTTTGA

Peptide Sequence

PEP ID

Zm00001d051671_P038
PEP Infomation

pep chromosome:B73_RefGen_v4:4:166250987:166260899:-1 gene:Zm00001d051671 transcript:Zm00001d051671_T038 gene_biotype:protein_coding transcript_biotype:protein_coding description:WD repeat-containing protein-like protein

Sequence

MKDCKPTEKGGMYYEFRRNTRSIKSTILHFQLRNLVWATSKHDIYLVSHYSIRHWSALSG
VDTELINVQGHVAPREKHAGSLSEGFYQTQVSTLAVKDNLLVAGGFQGELICKHLDREGI
SFCCRTTYDDNAITNAVEIFNTSSGAVHFIASNNDSGVRYYDMERFQLFKHLQFEWPVNH
ASLSPDRKVVVIVGDDPDGLLIDANSGKTLHSIKGHRDYSFASAWSPDGRTFATGNQDKT
CRIWDARNLSKSVHVLRGNLGAIRSIRFTSDGQFMSMAEPADFVHVYDVKSDYNKRQELD
FFGEISGTSFSPDTDALFVGVWDRMYGSLLQFGRLYNYSYLDSVF

Transcript Sequence

Transcript ID

Zm00001d051671_T038
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:166250987:166260899:-1 gene:Zm00001d051671 gene_biotype:protein_coding transcript_biotype:protein_coding description:WD repeat-containing protein-like protein

Sequence

TCTTCCATCGCTCCACCCCCACCCCCTTCTCTCTCGTAGCAACGTTTGGGGCGCCGTCGC
TGCCGCTCTACTCGGGTGCCCAGGTCTTGTTCGGGCCCTTCGCCGGCGAGCCAGGGGACA
CTTTCTTTGGTATGAGAGGATCAATGTCCAATTATTATGATGATTACGACGACATTGATG
AGATTGAGGATGACTATGATATGGATGATCCTGCTGATGACATGGTAGACGAGCAGCGAG
GGGTTAGGGATTCTGATGCGGAGGATAATGATTATGGACAACCAGTGTGTATCCTTTTCT
TTTTGTCATATATTGAGTCTTCAAAACTTTTTTGAGATAGGCTGATAGGCAGGTAGAACG
TTATCGTCTGGTAGCTACAAGTTTGCATCATTTGAATGCTGATTTAGCATATCTCTTACA
TATCCTACATCAACTACTTGCAACAGTAGCACAGCACGAAGCAAATCAGTTAGATATTTA
TTTGCCGCATGATGCACCAATGTTACATTGTTACCCCACATGCTACTTGTACCAGTAGCA
CTATATGCTTTTCTCATGTGCAAATATTATTGTCTAGGTAGCATGTAGTTCCGCTGATGT
AGTGATGTACACCAATGTTCTAGTTTTTCATACTGCATGTACTTGATAGCTTCACACGTT
GTCTGTTTTCTTTAATATAGAGTGATGTCCTCATACGGTTGCAAAATGTATGTCTGCTGA
AAATTGCAATTACCCAAATTATGGATTCACTACTATTTACTATTACCTCTCTCTAAATTG
CTCCTCTCTATCCTTAATATCTGTTGGCTTTGGTATGTGATGATTATTTTGTCTTGGTGT
CTGAGCCCTTGGTAAATTGCTTTCATTTTGGTTGGTATTTGTAAGCAAAATAGTATATAA
GATGATGGTTGTGTCCTTGGTTCATTCCATGACTATAATATCTATCTTCTAGCTTTACAG
ACACGATTTCATATGAGTTTGGTTTCTTTCTATTGCACCACCCCTCTGCCTTCCCATGCA
AATGAATTTTGAGATTCAACTTGCTGTTTGACTTGGAAGCTATGATGCCATTGCAATAAA
ATCAATGTTATATTGTTTATTGTGCACTTCATTGCATCCACGATCCTGGCATGATGTACC
ATTTGTGATACAACTTGGTCAAGTTGCTTATACAGCCACTTATATTGCTCTAAGTGATTG
TATTTTTTTCTCTTTAGAATGACAAGATCCCAGATACTTCATCAGCAGATGCAAGAAATG
GAAGGGACATTCAAGGAATACCCTGGGAGCAGCTAAACATAACCCGTAAAAAATATAGAC
AGTCCAGATTAGAACAGTACAAAAATTATGAGAATGTACCTAACTCTGGAGAAGAAGCTA
TGAAGGATTGCAAGCCAACAGAGAAAGGTGGAATGTACTATGAGTTCAGACGAAATACTC
GATCGATTAAGTCAACTATTCTACATTTTCAGCTTCGAAATTTGGTATGGGCTACGTCCA
AGCATGACATCTACCTAGTATCACATTACTCAATTCGTCATTGGTCAGCATTGAGTGGTG
TCGATACTGAACTTATCAACGTCCAAGGACACGTGGCACCAAGGGAGAAGCATGCAGGAA
GTTTATCAGAGGGTTTTTATCAGACTCAAGTTAGTACCTTGGCAGTCAAGGACAATTTAC
TGGTAGCTGGTGGGTTTCAAGGAGAGCTGATCTGTAAACACCTTGATCGGGAAGGTATTA
GTTTTTGCTGTCGAACAACTTATGATGATAATGCTATTACAAATGCGGTTGAGATATTTA
ATACCTCTAGTGGCGCTGTTCACTTCATCGCATCAAATAACGATTCTGGTGTGAGATACT
ATGACATGGAGAGATTCCAGCTATTCAAGCATTTGCAGTTTGAATGGCCAGTGAATCATG
CTTCTTTGAGTCCTGACAGAAAGGTCGTTGTTATTGTCGGTGATGATCCTGATGGTCTAC
TTATTGATGCCAACTCTGGAAAGACACTCCATTCCATAAAAGGACATCGGGACTACTCAT
TTGCATCGGCTTGGAGCCCTGATGGGCGAACATTTGCTACTGGCAACCAAGACAAGACAT
GCCGAATCTGGGACGCGAGGAATCTCTCAAAATCCGTCCATGTGTTGAGGGGTAACCTTG
GAGCCATCCGGTCCATCCGCTTCACCTCGGATGGCCAGTTCATGTCCATGGCTGAACCTG
CTGACTTTGTGCACGTCTACGACGTGAAGAGTGACTACAACAAAAGGCAGGAGCTGGACT
TCTTTGGCGAGATATCCGGCACATCGTTCAGCCCAGACACTGACGCGCTTTTCGTTGGCG
TGTGGGATAGGATGTATGGCAGCCTGCTTCAGTTTGGCCGCCTGTACAACTACTCGTATC
TTGACTCCGTGTTTTGATGTGGAACCAAACGGATGTTGGACTGTTGGGTTTGGTGTGCCG
CGGTTCTCTGAATGTTGTCAGCATGATTAGGCGGTTATCCTTATATCAGGATTTTAAGTT