Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d051669_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:4:166173412:166179015:1 gene:Zm00001d051669 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rubisco methyltransferase family protein
Sequence	ATGGCTACCTCCTCCACCACCGCGCTCCACTCGCAGTTCCGGCCACCGCTGCGCGCTCCC CGCCATCTCCGTCCGCTTCCACACTCGTATTCCTCCTCCTCCCGCACTCGCGGCTGCGCT CCTGTCCGGGCCTCAGCGGCGTCCGCATCCGCGCCGGCCCAGCGGGAGATCGCCGCGGGC GTCCCGTGGGGCTGCGAGATCGAGTCCCTGGAGAGCGCGGCATCGTTGGAGCGGTGGCTC ATAGACTCGGGCCTACCGGAGCAACGCTTGGCCATCCAACGCGTGGACATCGGCGAGCGC GGCCTCGTCGCCCTCAAGAACATACGCAAGGGGGAGAAGCTGCTCTTCGTGCCCCCTTCC CTCGTCATCACCGCCGATTCAGAGTGGGGTCGCCCTGAGGTGGGAGATGTGATGAAAAGG AACTCCGTGCCGGACTGGCCGCTTATCGCTACTTACCTCATAAGTGAAGCCAGTTTAGAG GGCTCGTCGAGGTGGATCAGCTACATAGCAGCGTTGCCGAGGCAGCCTTACTCGCTTTTA TACTGGACTCGTGCAGAGCTAGATGCATACTTAGTGGCCTCACCAATCAGGAAACGTGCA ATTCAGAGGATAACTGATGTGATTGGGACATACAACGACCTTCGAGACCGTATATTTTCC AGGCATCCAGATTTGTTCCCTGAAGAGGTGTATAACATAGAGACATTTCTATGGTCCTTT GGGATTCTGTTCTCACGCCTGGTTCGCTTGCCATCAATGGATGGAAGGGTTGCACTAGTT CCTTGGGCAGATATGCTTAATCATAGCCCCGAGGTGGAAACATTCTTGGATTTCGATAAG TCATCGCGAGGAATAGTTTTCACCACTGACCGCTCATATCAACCAGGTGAGCAGGTATTT ATATCTTATGGGAAGAAATCCAGTGGTGAGCTATTGCTTTCATATGGTTTTGTTCCAAAA GAGGGAACAAATCCAAATGATTCAGTTGAACTGTTGGTGTCTCTTGATAAGTCTGATAAT TGCTATAAAGAGAAATTACAAGCACTGAAGCGAAATGGTTTGTCAGAATCTGAAAGTTTC CCTTTGCGGGTCACAGGATGGCCAGTTGAGCTGATGGCTTATGCCTTCCTTGTGGTCAGT CCACCTGACATGAGTCAATGCTTTGAGGAGATGGCTGCTGCTGCATCTAATAAAACTTCA TCCAAACCTGGATTGAATTATCCTGACCTGGAAGAACAGGCCCTTCAGTTTATCTTGGAC TGCTGTGAATCTAATATAGAAAAATATACAAAGTACTTAGAGGTGACATCCTTTCCATGC CATCTCTTGCGCACTACAACCTCTCATAAGATCTTGACAATCTGTTATCCTATCATCATC ATCATCGTCATCATCATTTGA

Peptide Sequence

PEP ID	Zm00001d051669_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:4:166173412:166179015:1 gene:Zm00001d051669 transcript:Zm00001d051669_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rubisco methyltransferase family protein
Sequence	MATSSTTALHSQFRPPLRAPRHLRPLPHSYSSSSRTRGCAPVRASAASASAPAQREIAAG VPWGCEIESLESAASLERWLIDSGLPEQRLAIQRVDIGERGLVALKNIRKGEKLLFVPPS LVITADSEWGRPEVGDVMKRNSVPDWPLIATYLISEASLEGSSRWISYIAALPRQPYSLL YWTRAELDAYLVASPIRKRAIQRITDVIGTYNDLRDRIFSRHPDLFPEEVYNIETFLWSF GILFSRLVRLPSMDGRVALVPWADMLNHSPEVETFLDFDKSSRGIVFTTDRSYQPGEQVF ISYGKKSSGELLLSYGFVPKEGTNPNDSVELLVSLDKSDNCYKEKLQALKRNGLSESESF PLRVTGWPVELMAYAFLVVSPPDMSQCFEEMAAAASNKTSSKPGLNYPDLEEQALQFILD CCESNIEKYTKYLEVTSFPCHLLRTTTSHKILTICYPIIIIIVIII

Transcript Sequence

Transcript ID	Zm00001d051669_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:166173412:166179015:1 gene:Zm00001d051669 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rubisco methyltransferase family protein
Sequence	GGATAAGCCCCCGCGCCGGTGCCTACACAGTACACACTGACCACGTCAGTTTCGCCATGG CTACCTCCTCCACCACCGCGCTCCACTCGCAGTTCCGGCCACCGCTGCGCGCTCCCCGCC ATCTCCGTCCGCTTCCACACTCGTATTCCTCCTCCTCCCGCACTCGCGGCTGCGCTCCTG TCCGGGCCTCAGCGGCGTCCGCATCCGCGCCGGCCCAGCGGGAGATCGCCGCGGGCGTCC CGTGGGGCTGCGAGATCGAGTCCCTGGAGAGCGCGGCATCGTTGGAGCGGTGGCTCATAG ACTCGGGCCTACCGGAGCAACGCTTGGCCATCCAACGCGTGGACATCGGCGAGCGCGGCC TCGTCGCCCTCAAGAACATACGCAAGGGGGAGAAGCTGCTCTTCGTGCCCCCTTCCCTCG TCATCACCGCCGATTCAGAGTGGGGTCGCCCTGAGGTGGGAGATGTGATGAAAAGGAACT CCGTGCCGGACTGGCCGCTTATCGCTACTTACCTCATAAGTGAAGCCAGTTTAGAGGGCT CGTCGAGGTGGATCAGCTACATAGCAGCGTTGCCGAGGCAGCCTTACTCGCTTTTATACT GGACTCGTGCAGAGCTAGATGCATACTTAGTGGCCTCACCAATCAGGAAACGTGCAATTC AGAGGATAACTGATGTGATTGGGACATACAACGACCTTCGAGACCGTATATTTTCCAGGC ATCCAGATTTGTTCCCTGAAGAGGTGTATAACATAGAGACATTTCTATGGTCCTTTGGGA TTCTGTTCTCACGCCTGGTTCGCTTGCCATCAATGGATGGAAGGGTTGCACTAGTTCCTT GGGCAGATATGCTTAATCATAGCCCCGAGGTGGAAACATTCTTGGATTTCGATAAGTCAT CGCGAGGAATAGTTTTCACCACTGACCGCTCATATCAACCAGGTGAGCAGGTATTTATAT CTTATGGGAAGAAATCCAGTGGTGAGCTATTGCTTTCATATGGTTTTGTTCCAAAAGAGG GAACAAATCCAAATGATTCAGTTGAACTGTTGGTGTCTCTTGATAAGTCTGATAATTGCT ATAAAGAGAAATTACAAGCACTGAAGCGAAATGGTTTGTCAGAATCTGAAAGTTTCCCTT TGCGGGTCACAGGATGGCCAGTTGAGCTGATGGCTTATGCCTTCCTTGTGGTCAGTCCAC CTGACATGAGTCAATGCTTTGAGGAGATGGCTGCTGCTGCATCTAATAAAACTTCATCCA AACCTGGATTGAATTATCCTGACCTGGAAGAACAGGCCCTTCAGTTTATCTTGGACTGCT GTGAATCTAATATAGAAAAATATACAAAGTACTTAGAGGTGACATCCTTTCCATGCCATC TCTTGCGCACTACAACCTCTCATAAGATCTTGACAATCTGTTATCCTATCATCATCATCA TCGTCATCATCATTTGATCCTGTCATCCTTTGATAAATGCTTTTGTACACAAATCACCGT GATCAGTTTTCAGAGTGAACCGATAATGTTTCAGGGTGGCGCTGGCTCTCCAGAAGTTCC AATGAATGCAAAGCAAGCCAACAGAACATTACTGCTAAAACAGCTAGCAAGAGATCTGTG CATCAGTGAACGGAGAATCCTGTATCGCACACAATATATATTGCGTAGAAGATTGAGGGA CATGAGAGGCGGCGAACTTAGAGCTCTGTCACTTTTCAACGGGCTGAGAAAACTCTTTAA ATAAATGGATCGGCTATCTTATCTTGGCAGATCTTACTGGACAGATTTGATTTCTCCAGT AACATGGTGCTTTGACCTTGCCGCCAAAGCCTCAGATACTTGTATGCCAAATCAGACTGC AGTCCAGGCTCTCGGCCGCAAATTTCATCTAGATGCTAGAAACAAGTAAACCTTCGATGA AGGATAGCTGTGCGTTGAGATTGAACAACCCAGAGCTTATATGTATGTGTGTAATGTAGA TTCAGTCCAACCATGGAGTCGTTTTACGCTAGGTGCGAGCCTGGCCTTCTGTTACGTATA TAATTATAAATCCAGTAGCCAGCAAGGCAACCCCCCACCCCCATGTGTACACAGGATCGA TCTCAGAACAGATGATTTGGTTCTCCCTTCATCATGCTTCAACTTTGTCCATTACCC