Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d051664_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:4:166088731:166091819:-1 gene:Zm00001d051664 gene_biotype:protein_coding transcript_biotype:protein_coding description:2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Sequence

ATGGACCTGCCAGTGGTAGATCTCACGCCGTATCTCGGGGCCGCAGCCGGCGGCCCGGCC
GCGTCGGGCGTGGAGGAGCTGCGCGCGCTGTGCGCCACAGTGAGCGCTAGTCTGCGGGAC
ACGGGGGCGCTGCTGGTGATGGACCCGCGCTGCTCCGCCGCGGACAACGACCGCTTCCTC
GACGTCGTCGAGCGCTACTTCGCCCGATCCGCCGACGCAAAGCGCCTCCAGGAACGGCCC
CACCTCCACTACCAGGTTGGTGTCACACCCGAAGGGGTGGAGGTGCCTCGCAGTTTGGTC
GACAAGAACATGCAGGAGAAGATCAGGAGCATGCCTAAGGACTTTAGGCCAGCCACTCCT
AAAGGGCCGGACCCGAAATGGCGATACATGTGGAGAGTGGGTCCTCGCCCTACAAACACC
CGTTTTAAGGAGCTGAACTCAGAACCTGTTATCCCTGAGGGATTACCTGAGTGGGAAGAG
ATGATGGATTCCTGGGGTTCTAAAATGATTTCTGCAATTGAGGTTGTTGCTGAGATGGCT
GCAATAGGCTTTGGCCTATCGAAGGATGCATTTACTTCTTTGATGAAAGAGGGACCACAT
CTCCTCGCACCAACTGGAAGTGACCTGCAGCGTCATGGTTCTGAGGGCACCGTTTTTGCT
GGATTCCACTATGATCTTAATTTCTTGACGATACATGGCCGAAGTAGATTCCCAGGCCTT
AACATCTGGTTAAGGAATGGTAAAAAGATGGAGGTGAAAGTCCCTGTTGGTTGCCTTCTA
ATTCAGTCTGGAAAACAGCTGGAATGGCTTACTGGTGGCGATTGTTTGGCTGGAATGCAT
GAGGTAGTGGTAACTAAGAGGACACTAGAGGCCATAGCGCTAGCGAAAGAACAGAATAGA
AGCTTGTGGAGGGTTTCATCAACACTGTTCGCGCACATTGCTTCGGATGCAATTCTTAAG
CCGCTCGGCCACTTTGCTGAAACACCTGATGCTCATTCCTATCCACCTATATGCGCTGGG
GATTATGTCGAGCAGGAGCTTTCAGTGATTAACCTGAAGGGAAAGGATTAA

Peptide Sequence

PEP ID

Zm00001d051664_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:4:166088731:166091819:-1 gene:Zm00001d051664 transcript:Zm00001d051664_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Sequence

MDLPVVDLTPYLGAAAGGPAASGVEELRALCATVSASLRDTGALLVMDPRCSAADNDRFL
DVVERYFARSADAKRLQERPHLHYQVGVTPEGVEVPRSLVDKNMQEKIRSMPKDFRPATP
KGPDPKWRYMWRVGPRPTNTRFKELNSEPVIPEGLPEWEEMMDSWGSKMISAIEVVAEMA
AIGFGLSKDAFTSLMKEGPHLLAPTGSDLQRHGSEGTVFAGFHYDLNFLTIHGRSRFPGL
NIWLRNGKKMEVKVPVGCLLIQSGKQLEWLTGGDCLAGMHEVVVTKRTLEAIALAKEQNR
SLWRVSSTLFAHIASDAILKPLGHFAETPDAHSYPPICAGDYVEQELSVINLKGKD

Transcript Sequence

Transcript ID

Zm00001d051664_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:166088731:166091819:-1 gene:Zm00001d051664 gene_biotype:protein_coding transcript_biotype:protein_coding description:2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Sequence

ACCAAACAAACCCTTATCTTCTTTATCGAAACAGGTTCCGTGCGCACCCGGTTTGCTGTT
CCTGCCCCAACTCTCCCTCTCGGTGCCTTCACGCATCACCCCACCGCTCCCTGCAACTAC
AACTCTGTTTCACATCGTCCGCTCGTCATACTCCCGAGGCCCCGATCCCCCTTTCATTTC
AACTCGCATCTCCCGCGCCGCGCCGCCCCAGCCCGGCAGCCCAAATGGACCTGCCAGTGG
TAGATCTCACGCCGTATCTCGGGGCCGCAGCCGGCGGCCCGGCCGCGTCGGGCGTGGAGG
AGCTGCGCGCGCTGTGCGCCACAGTGAGCGCTAGTCTGCGGGACACGGGGGCGCTGCTGG
TGATGGACCCGCGCTGCTCCGCCGCGGACAACGACCGCTTCCTCGACGTCGTCGAGCGCT
ACTTCGCCCGATCCGCCGACGCAAAGCGCCTCCAGGAACGGCCCCACCTCCACTACCAGG
TTGGTGTCACACCCGAAGGGGTGGAGGTGCCTCGCAGTTTGGTCGACAAGAACATGCAGG
AGAAGATCAGGAGCATGCCTAAGGACTTTAGGCCAGCCACTCCTAAAGGGCCGGACCCGA
AATGGCGATACATGTGGAGAGTGGGTCCTCGCCCTACAAACACCCGTTTTAAGGAGCTGA
ACTCAGAACCTGTTATCCCTGAGGGATTACCTGAGTGGGAAGAGATGATGGATTCCTGGG
GTTCTAAAATGATTTCTGCAATTGAGGTTGTTGCTGAGATGGCTGCAATAGGCTTTGGCC
TATCGAAGGATGCATTTACTTCTTTGATGAAAGAGGGACCACATCTCCTCGCACCAACTG
GAAGTGACCTGCAGCGTCATGGTTCTGAGGGCACCGTTTTTGCTGGATTCCACTATGATC
TTAATTTCTTGACGATACATGGCCGAAGTAGATTCCCAGGCCTTAACATCTGGTTAAGGA
ATGGTAAAAAGATGGAGGTGAAAGTCCCTGTTGGTTGCCTTCTAATTCAGTCTGGAAAAC
AGCTGGAATGGCTTACTGGTGGCGATTGTTTGGCTGGAATGCATGAGGTAGTGGTAACTA
AGAGGACACTAGAGGCCATAGCGCTAGCGAAAGAACAGAATAGAAGCTTGTGGAGGGTTT
CATCAACACTGTTCGCGCACATTGCTTCGGATGCAATTCTTAAGCCGCTCGGCCACTTTG
CTGAAACACCTGATGCTCATTCCTATCCACCTATATGCGCTGGGGATTATGTCGAGCAGG
AGCTTTCAGTGATTAACCTGAAGGGAAAGGATTAAGTATAGACTCTATGCAGCTGGTGCA
TCTGGATATCTTATGAATTGACAGATATCAGGATGCAACACTAAATCACCCCAACTGACA
ATTGGGTATCCGTTTCCAAATGCTGCTGTACTGAAGGTGGTTAAGTTGGCCCGAAGACAT
GCTTGTTCATTGCTTGCTCTTGTTAAGATAGTGGATACCCTTCTTTGTGAACCACATATC
ACTTATGAAAATAAAATGTATAGCTTCCTCATAAATCTGTCTTTCTCCTTGAAACTGATA
TCCGGCTAGTTCAGACATCTGTAGTGTCTGATGTAGTTCCGAAACAGAGAAACTTTTCGA
TCGACCAAAAATATACTTCTCACGC