Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d051626_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:4:164951996:164957221:-1 gene:Zm00001d051626 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-hydroxy-3-methylglutaryl-coenzyme A reductase 2
Sequence	ATGGACGTGCGCCGGCTCGGAGGCCGCATCGCGGCGGCGCTGAGGGCGCTCGCCGCGGGG GGCTCGCTGCCCATCCCGGCGTGGATCACCAACGGCCTGGCGATGATCTCGCTCGTGCTC TCCTCCTGCGACCTGCTCCGCCTCTGCAGCGACAGAGACCGACGTCTCCGGTTCCCGCTC GGTGGCCGCGAGTTCGTTACCGTGGTCTGCCAGCTGGCCTCCATCGTGTACCTCTTCAGC CCTTGCGGTACTGGTATCCCATCTGCGAACCCCGAGACCCCCGCCTGCCGCGACCAGGGC GGCTCCGCCGACCAAACGCGCGCCGCCGCCGCCGACGCGCCGGAGGCATTGCATGGCGGG GCGGAGGGCGAGGACGAGGAGATCGTCGCCGCTGTGGTGTCCGGGGCGCTGCCGTCGCAC CACCTCGAGTCGCGCCTCGGAGACTGCCGCCGCGCTGCCAGGCTGCGGCGGGAGGCGCTA CGGCGGATGACGGGGCGGGGCGTTGAGGGGCTCCCGCTCGACGGGATGGACTACCAGGCC ATCCTGGGACAATGCTGCGAGATGCCCGTTGGGTACGTGCAGATGCCGGTCGGGGTCGCC GGGCCGCTGCTCCTGGATGGGAAACAGTACCATGTTCCCATGGCTACCACCGAGGGATGT CTCGTGGCCAGCGTCAACCGCGGCTGCAGAGCCATCGCTGCGTCTGGGGGCGCCTTCAGC GTGCTGCTCCGGGATGCAATGTCTCGTGCGCCTGTCGTCAAGTTGCCATCGATCAAGAGG GCTGCGGAGCTCAAGGCGTTCGTCGAGACACACACCAATTTCGAGACTCTGGCTGCTGTC TTCAATAGATCCAGCAGATTTGGGAAGCTTCAAGGCATTCATTGTGCACTAGCAGGACGG AACCTTTACATGAGGTTCACTTGTAGTACTGGAGATGCTATGGGAATGAATATGGTGTCA AAAGGTGTTGAGGATGTCTTGGGCTACTTGCAGAATGATTTCCCCGACATGGATCTCATC AGCCTATCTGGTAACTATTGTTCAGACAAGAAGGCTGCAGCCGTAAACTGGATAGAAGGT CGTGGGAAATCTGTTGTTTGTGAGGCCAGAGTCAAAGGGGGAGTTGTGCAGAGCGTTCTT AAGACCACCGTGCAAAAACTCGTCGAGCTTAACATCGTAAAGAATCTCGCTGGATCAGCT GTGGCCGGAGCTCTTGGAGGTTTCAATGCCCATGCAAGCAATATCGTTACCGCCCTGTTC ATTGCTACGGGGCAGGATCCTGCCCAGAACGTTGAAAGCTCACAGTGCATCACCATGATG GAGGCAGTGAATGACGGAGGCGATCTTCACATCTCTGTGACCATGCCTTCCATTGAGGTA GGCACTGTCGGGGGTGGCACCTGTCTTGCTTCACAGGCCGCATGCCTGAACCTGCTTGGC GTCAGGGGTCCGAACCGTGACTCGCCTGGGGCAAATGCTAGGATTCTTGCAACCATTGTC GCCGGCAGCGTGCTCGCAGGCGAGCTCTCTCTCCTGGCAGCCCTTGCCGCTGGCCAACTC GTGAAGAGCCACATGAAGTACAACCGATCGAGCAAAGACGTGCCAGGT

Peptide Sequence

PEP ID	Zm00001d051626_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:4:164951996:164957221:-1 gene:Zm00001d051626 transcript:Zm00001d051626_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-hydroxy-3-methylglutaryl-coenzyme A reductase 2
Sequence	MDVRRLGGRIAAALRALAAGGSLPIPAWITNGLAMISLVLSSCDLLRLCSDRDRRLRFPL GGREFVTVVCQLASIVYLFSPCGTGIPSANPETPACRDQGGSADQTRAAAADAPEALHGG AEGEDEEIVAAVVSGALPSHHLESRLGDCRRAARLRREALRRMTGRGVEGLPLDGMDYQA ILGQCCEMPVGYVQMPVGVAGPLLLDGKQYHVPMATTEGCLVASVNRGCRAIAASGGAFS VLLRDAMSRAPVVKLPSIKRAAELKAFVETHTNFETLAAVFNRSSRFGKLQGIHCALAGR NLYMRFTCSTGDAMGMNMVSKGVEDVLGYLQNDFPDMDLISLSGNYCSDKKAAAVNWIEG RGKSVVCEARVKGGVVQSVLKTTVQKLVELNIVKNLAGSAVAGALGGFNAHASNIVTALF IATGQDPAQNVESSQCITMMEAVNDGGDLHISVTMPSIEVGTVGGGTCLASQAACLNLLG VRGPNRDSPGANARILATIVAGSVLAGELSLLAALAAGQLVKSHMKYNRSSKDVPG

Transcript Sequence

Transcript ID	Zm00001d051626_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:164951996:164957221:-1 gene:Zm00001d051626 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-hydroxy-3-methylglutaryl-coenzyme A reductase 2
Sequence	ATCAGTGCGAGAAACCCCCGCGGCCACTCCGCGTGACCGCGTCCGTCCGATCATCGTCAA CGAACCGAGCACCCCCCGCAGGCCGCACAGCGCCTCCTGGCCTCCTGCACGACCAGGCAC CAGCAGCACGCACGAGTCACGACACACAATCGTCGAGCGCACGCGCAGACGCGCTCCGCT TGACACCGCTGACGGTGGCCGGTTAAGCCCGAGCGGTGGTGGATGGACGTGCGCCGGCTC GGAGGCCGCATCGCGGCGGCGCTGAGGGCGCTCGCCGCGGGGGGCTCGCTGCCCATCCCG GCGTGGATCACCAACGGCCTGGCGATGATCTCGCTCGTGCTCTCCTCCTGCGACCTGCTC CGCCTCTGCAGCGACAGAGACCGACGTCTCCGGTTCCCGCTCGGTGGCCGCGAGTTCGTT ACCGTGGTCTGCCAGCTGGCCTCCATCGTGTACCTCTTCAGCCCTTGCGGTACTGGTATC CCATCTGCGAACCCCGAGACCCCCGCCTGCCGCGACCAGGGCGGCTCCGCCGACCAAACG CGCGCCGCCGCCGCCGACGCGCCGGAGGCATTGCATGGCGGGGCGGAGGGCGAGGACGAG GAGATCGTCGCCGCTGTGGTGTCCGGGGCGCTGCCGTCGCACCACCTCGAGTCGCGCCTC GGAGACTGCCGCCGCGCTGCCAGGCTGCGGCGGGAGGCGCTACGGCGGATGACGGGGCGG GGCGTTGAGGGGCTCCCGCTCGACGGGATGGACTACCAGGCCATCCTGGGACAATGCTGC GAGATGCCCGTTGGGTACGTGCAGATGCCGGTCGGGGTCGCCGGGCCGCTGCTCCTGGAT GGGAAACAGTACCATGTTCCCATGGCTACCACCGAGGGATGTCTCGTGGCCAGCGTCAAC CGCGGCTGCAGAGCCATCGCTGCGTCTGGGGGCGCCTTCAGCGTGCTGCTCCGGGATGCA ATGTCTCGTGCGCCTGTCGTCAAGTTGCCATCGATCAAGAGGGCTGCGGAGCTCAAGGCG TTCGTCGAGACACACACCAATTTCGAGACTCTGGCTGCTGTCTTCAATAGATCCAGCAGA TTTGGGAAGCTTCAAGGCATTCATTGTGCACTAGCAGGACGGAACCTTTACATGAGGTTC ACTTGTAGTACTGGAGATGCTATGGGAATGAATATGGTGTCAAAAGGTGTTGAGGATGTC TTGGGCTACTTGCAGAATGATTTCCCCGACATGGATCTCATCAGCCTATCTGGTAACTAT TGTTCAGACAAGAAGGCTGCAGCCGTAAACTGGATAGAAGGTCGTGGGAAATCTGTTGTT TGTGAGGCCAGAGTCAAAGGGGGAGTTGTGCAGAGCGTTCTTAAGACCACCGTGCAAAAA CTCGTCGAGCTTAACATCGTAAAGAATCTCGCTGGATCAGCTGTGGCCGGAGCTCTTGGA GGTTTCAATGCCCATGCAAGCAATATCGTTACCGCCCTGTTCATTGCTACGGGGCAGGAT CCTGCCCAGAACGTTGAAAGCTCACAGTGCATCACCATGATGGAGGCAGTGAATGACGGA GGCGATCTTCACATCTCTGTGACCATGCCTTCCATTGAGGTAGGCACTGTCGGGGGTGGC ACCTGTCTTGCTTCACAGGCCGCATGCCTGAACCTGCTTGGCGTCAGGGGTCCGAACCGT GACTCGCCTGGGGCAAATGCTAGGATTCTTGCAACCATTGTCGCCGGCAGCGTGCTCGCA GGCGAGCTCTCTCTCCTGGCAGCCCTTGCCGCTGGCCAACTCGTGAAGAGCCACATGAAG TACAACCGATCGAGCAAAGACGTGCCAGGT