Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d051589_T006
CDS Infomation	cds chromosome:B73_RefGen_v4:4:163588847:163592598:-1 gene:Zm00001d051589 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide repeat (TPR)-like superfamily protein
Sequence	ATGCCTGGAATTACAGAGGATGGAGTTGTTGCAGAGGAGGTGCCGAACGGGGTGAATTTC TCTCCACAGAACGAAAGTCTGCCTGCCCCAAAGTCGACAGCAGCTTCAACGATGGCGGGT AGCATGCAAAGCGAGGCGCTTGAGATGCATGTTGAGGCCTCCGGTGCTGGGGAACCCTCA ATCGAGCAACTCTACAACAACGTATGCGAGATGGAGAGCTCAAGTGAGGGTGGCTCCCCA TCACGCGAGAGCTTTGGCTCGGACGGGGAGGAGTCTAGAATTGACTCGGAGCTTCGACAT CTTGTTGCTGGGGAGATGGAGGCCATGAAGGTGATTGAGGAGGAAGAGGAGAATGGGAGT GTTGCCAACGTTGTACCCCCTGCTCCTGCTGAGAATGGGACCCCAGTAAAGGAACACTCT TCCAGTTCGTCCAAGAAGTCGAAGAAGGCATCAAAATCACAGCTTGAGTCTGATGCCTCT GTTGGACTCAATGGAAAGGCGTCCACTGAGGAAGGTGAGAGCGAGGTCAGCAAACCGGCA AGCCGAGTTGGCCGACGGCGGAAATCAAATGCCAACCCACAGAGTGGAACAGAAGATGCT GGGCTTGATAACCCAGACCTTGGTCCATTTCTTCTTAAACATGCAAGAGACTTGATTGCC TCAGAAAACCCACGGCGGGCATTGAAATATGCTCTCCGTGCCACAAAGTCGTTTGAGAAG TGTGCTGGTGGAAAGCCAAGCTTGAACTTAGTGATGAGTTTGCATGTTGTTGCAGCAATC TACTGCAACTTGGGAAAATATGAAGAGGCTGTACCTGTGCTGCATCGATCCATTGAGATC CCTGTAATCGAGGAAGGCCAGGAACATGCTCTCGCAAAGTTTTCTGGTTGCATGCAGTTG GGGGACACCTATGGCATGCTAGGTCAAACTGCACACTCACTGCAATGGTATGCTTCTGGG CTTGAAATACAAAAGCAAACATTGGGAGAGCAAGACCCAAGGGTTGGAGAGACTTGTCGG TACTTAGCTGAGGCCCATGTGCAGGCACTACAACTCGATGAAGCACAAAGATTGTGTCAG ATAGCCCTTGACATCCACAGGGAGCATCGCGAGACGGCCTCACTAGAAGAAACAGCTGAT AGGAGGCTGATGGGTCTAATTTGTGACACTAAGGGTGATCACGAAGCTGCCCTGGAGCAT CTAGTGATGGCCAGCATGTCCATGGTAGCCAATGGTCAGGAGACAGAGGTGGCCTCAGTG GATTGCAGCATTGGTGATATCTACCTCTCCCTGGGCCGGTATGATGAGGCTGTGTTTGCT TACCAGAAAGCTCTCACTGTATTCAAGACCAGCAAAGGGGAGAACCATGCAACTGTGGCT TCTGTTTTCGTGCGCCTAGCAGATCTGTACAATAAGACGGGGAAGCTGAGGGAGTCAAAA TCCTACTGTGAAAACGCCCTAAAAATCTACCAAAAGCCTATTCCAGGGACTTCTCTGGAA GAAATCGCCACTGGTCTAACTGACGTCTCAGCCATATATGAGACGATGAATGAGCACGAG CAAGCGCTCAAGCTACTTCAGAAGGCCTTAAAAATGTACAACAACTCTGCCGGCCAGCAG AGCACGATTGCTGGCATTGAGGCTCAGATGGGCGTGCTGCACTACATTTTGGGCAACTAT GGCGAGTCCTACGACTCCTTCAAGAGCGCAATTGCAAAGCTCCGCACTTGTGGCGAGAAG AAGTCTGCCTTCTTCGGGATTGCCCTGAACCAGATGGGGCTGGCATGTGTTCAGAGGTAT TCGATAAACGAAGCAGCAGAATTGTTCGAGGAAGCTAGAACTGTTCTGGAACAAGAATAC GGGCCATACCATCCGGATACTTTAGGAGTCTACAGTAATCTTGCTGGAACTTATGACGCG ATGGGAAGGTAA

Peptide Sequence

PEP ID	Zm00001d051589_P006
PEP Infomation	pep chromosome:B73_RefGen_v4:4:163588847:163592598:-1 gene:Zm00001d051589 transcript:Zm00001d051589_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide repeat (TPR)-like superfamily protein
Sequence	MPGITEDGVVAEEVPNGVNFSPQNESLPAPKSTAASTMAGSMQSEALEMHVEASGAGEPS IEQLYNNVCEMESSSEGGSPSRESFGSDGEESRIDSELRHLVAGEMEAMKVIEEEEENGS VANVVPPAPAENGTPVKEHSSSSSKKSKKASKSQLESDASVGLNGKASTEEGESEVSKPA SRVGRRRKSNANPQSGTEDAGLDNPDLGPFLLKHARDLIASENPRRALKYALRATKSFEK CAGGKPSLNLVMSLHVVAAIYCNLGKYEEAVPVLHRSIEIPVIEEGQEHALAKFSGCMQL GDTYGMLGQTAHSLQWYASGLEIQKQTLGEQDPRVGETCRYLAEAHVQALQLDEAQRLCQ IALDIHREHRETASLEETADRRLMGLICDTKGDHEAALEHLVMASMSMVANGQETEVASV DCSIGDIYLSLGRYDEAVFAYQKALTVFKTSKGENHATVASVFVRLADLYNKTGKLRESK SYCENALKIYQKPIPGTSLEEIATGLTDVSAIYETMNEHEQALKLLQKALKMYNNSAGQQ STIAGIEAQMGVLHYILGNYGESYDSFKSAIAKLRTCGEKKSAFFGIALNQMGLACVQRY SINEAAELFEEARTVLEQEYGPYHPDTLGVYSNLAGTYDAMGR

Transcript Sequence

Transcript ID	Zm00001d051589_T006
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:163588847:163592598:-1 gene:Zm00001d051589 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide repeat (TPR)-like superfamily protein
Sequence	CCGCACTCGTCTTCTCTCTTCCTCTTCTCTCTGTCTCTCCTACCCTCCGTCACCACCTCG TCCCTATGGCAAGCGAGCTTCTCCCAGCCTCTTCCTACCAGACTATCCTCCTGCCGCAAC GGACCTGACGGTTTCCCTCCATCTGGCCTCCCTGTCGCGCGAGCTGATCGACCCACGCAA GCGCAATGCCGTCCAGAGGCTAGTTCGAGCTGCTGAGCGCTGATCACGGTGAGGCCACCC AGATCCACCCGACTGCCACCCGGATTTCGCACCTTGCCTTTTCTTCTCTCGTTCACCCAG CTGGCTCGGTCGCTCCTCCCTCTCTAGTGGGCAACTGCCAACTGGGCGACTCGCCGACGC CCCTACGCCAGGTGCTCAGGTCTTCGTCGGGTCTTTTGCCGGCGACGAACACACACCAGG TTTGCGCACCCTTTCTCTTCCATTCCTGAAAAATTCCGTTTTTTTTCCAGGGTATTGTGT AGAGCTATCATCTCCCTCGGTTTCTTGGAAGAACAATTATTTGACATAATTATCACCATA AGATGCCTGGAATTACAGAGGATGGAGTTGTTGCAGAGGAGGTGCCGAACGGGGTGAATT TCTCTCCACAGAACGAAAGTCTGCCTGCCCCAAAGTCGACAGCAGCTTCAACGATGGCGG GTAGCATGCAAAGCGAGGCGCTTGAGATGCATGTTGAGGCCTCCGGTGCTGGGGAACCCT CAATCGAGCAACTCTACAACAACGTATGCGAGATGGAGAGCTCAAGTGAGGGTGGCTCCC CATCACGCGAGAGCTTTGGCTCGGACGGGGAGGAGTCTAGAATTGACTCGGAGCTTCGAC ATCTTGTTGCTGGGGAGATGGAGGCCATGAAGGTGATTGAGGAGGAAGAGGAGAATGGGA GTGTTGCCAACGTTGTACCCCCTGCTCCTGCTGAGAATGGGACCCCAGTAAAGGAACACT CTTCCAGTTCGTCCAAGAAGTCGAAGAAGGCATCAAAATCACAGCTTGAGTCTGATGCCT CTGTTGGACTCAATGGAAAGGCGTCCACTGAGGAAGGTGAGAGCGAGGTCAGCAAACCGG CAAGCCGAGTTGGCCGACGGCGGAAATCAAATGCCAACCCACAGAGTGGAACAGAAGATG CTGGGCTTGATAACCCAGACCTTGGTCCATTTCTTCTTAAACATGCAAGAGACTTGATTG CCTCAGAAAACCCACGGCGGGCATTGAAATATGCTCTCCGTGCCACAAAGTCGTTTGAGA AGTGTGCTGGTGGAAAGCCAAGCTTGAACTTAGTGATGAGTTTGCATGTTGTTGCAGCAA TCTACTGCAACTTGGGAAAATATGAAGAGGCTGTACCTGTGCTGCATCGATCCATTGAGA TCCCTGTAATCGAGGAAGGCCAGGAACATGCTCTCGCAAAGTTTTCTGGTTGCATGCAGT TGGGGGACACCTATGGCATGCTAGGTCAAACTGCACACTCACTGCAATGGTATGCTTCTG GGCTTGAAATACAAAAGCAAACATTGGGAGAGCAAGACCCAAGGGTTGGAGAGACTTGTC GGTACTTAGCTGAGGCCCATGTGCAGGCACTACAACTCGATGAAGCACAAAGATTGTGTC AGATAGCCCTTGACATCCACAGGGAGCATCGCGAGACGGCCTCACTAGAAGAAACAGCTG ATAGGAGGCTGATGGGTCTAATTTGTGACACTAAGGGTGATCACGAAGCTGCCCTGGAGC ATCTAGTGATGGCCAGCATGTCCATGGTAGCCAATGGTCAGGAGACAGAGGTGGCCTCAG TGGATTGCAGCATTGGTGATATCTACCTCTCCCTGGGCCGGTATGATGAGGCTGTGTTTG CTTACCAGAAAGCTCTCACTGTATTCAAGACCAGCAAAGGGGAGAACCATGCAACTGTGG CTTCTGTTTTCGTGCGCCTAGCAGATCTGTACAATAAGACGGGGAAGCTGAGGGAGTCAA AATCCTACTGTGAAAACGCCCTAAAAATCTACCAAAAGCCTATTCCAGGGACTTCTCTGG AAGAAATCGCCACTGGTCTAACTGACGTCTCAGCCATATATGAGACGATGAATGAGCACG AGCAAGCGCTCAAGCTACTTCAGAAGGCCTTAAAAATGTACAACAACTCTGCCGGCCAGC AGAGCACGATTGCTGGCATTGAGGCTCAGATGGGCGTGCTGCACTACATTTTGGGCAACT ATGGCGAGTCCTACGACTCCTTCAAGAGCGCAATTGCAAAGCTCCGCACTTGTGGCGAGA AGAAGTCTGCCTTCTTCGGGATTGCCCTGAACCAGATGGGGCTGGCATGTGTTCAGAGGT ATTCGATAAACGAAGCAGCAGAATTGTTCGAGGAAGCTAGAACTGTTCTGGAACAAGAAT ACGGGCCATACCATCCGGATACTTTAGGAGTCTACAGTAATCTTGCTGGAACTTATGACG CGATGGGAAGGTAAACTCCCTACTTCTCGAGCCCAATTCATTGTCTCAACTAGGTGCTGA TGATTGTCTGTGTGGCTGCATGCATAATGATTTGCATTCCAATCAGTGATTTGCTGGAAG CAGTAGGTGGCATGTAGGGTAAAGGTACTATGGCAAGTGGGGATTCTTTGTTCTTAGTCT ACTCCTCTTACAGCTAGGCTCATGATTAGCATCTATCACCAGCTTCTTGCTACTCCAATT AGTTGATCAGATACCGGTACCAGTATAAAGTTGGATCAATTTAATTGAAGTAGGACCATC CTGCATCATCTTTACTTGCTTGTCGCTGGCTGCTCTGTAAAAGAAGGGTTCCGCATACTT TATCCTTTTGCTTTGTCTTTTTTATGTTTGTTTTCTTGCTCCCTGTTCTCGTGGAAACTT CATCCTGCTTTGTAAGGCATGTGGACTTTTAGCTTTATAGTCTGGGTGAAAGAGTACAAC TGGCTGGATCAAAAATGTCAACACTACCTTAGCTGGCTAGATCAGATCGCTGAAGCAGCG GTACTTCTTCCTGAGTTACTGCTTTAGTACTTGTTTGGGAGCTTGCTATTCAAAATTAAA AGTTTGTGTTTCATTTTAGCCACAAATTATCTGTTGATATTTGCATTTTGTTTACCAGGC TGGATGAGGCCATCGAGATCTTGGAATATGTGGTTGGAATGCGCGAGGAGAAGCTAGGTA CGGCAAACCCAGACGTTGACGACGAGAAGCGGAGGCTTGGGGAGCTATTGAAGGAGGCTG GCCGGGTGCGAAGCAGAAAGGCGAAATCCCTGGAGAATCTGCTCGAGACCAACCCGTATA TCGCCACCAAGAGAAATGCCGTTGCTGCATGAGTCACTCTGTCCTCAGATGACACGGTAT TGTGATGGAAGGCGAGGATTGTTACTAAGGTATTCGTATTCATTTGGTTTGTTCAGATGG GGGGTAACGGGAGTAGTGGTGTTTACATATTTGGAAATATGAAAATGCTTAAATTGATTG TTGTAAAGTTTCAAATGCTACTGTTTCTCCTTTTC