Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d051572_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:4:163135825:163140188:1 gene:Zm00001d051572 gene_biotype:protein_coding transcript_biotype:protein_coding description:AAA-type ATPase family protein
Sequence

ATGCGGAAGCAGGAGGAGACGCGCCTCACTGAGCTGGAGGTCGAGAAGGTCCAATACGCC
ATCTATGAGAAGCTGAGGGACATCGAAAGGATGCAGAAAAAAGCTGAAGATTACAGAAAT
AGTTTGCAACAAGAAGCACAAGCAAAAGCTCAAGCATTACGCTTTGAGGATGAATTAGCT
AGAAAAAGAATGCAGACAGATCATGCTGCACAGAGGCGACAGGATGCTGAACTCGTGAAG
ATGCAAGAGGCATCTGCCCTCAGGAGAGAAGAAGCTAGGCGTGCAACAGAACAGAAGATT
TTGGAAGAAATGATACGTACTGAGAAGGAAAAGGCTGAAATAGATCAGGAAACAAACAGA
GTTAAAGCTATAGCTGAAGCAGAAGCTCGTGTTCATGAAGACAAGCAATCAGAAGAAGTT
GTTAAAAGAATGTTATTGGAACGCATGAAGGGTGAAAAGGAAAAGTGGCTCACTGCAATA
AATACAACATTTTCGCACATTGAAGGTGGATTCAAAGCACTGTTAACTGATAGGAGCAAA
CTAATGATGGGTATTGGAGGAGTTACTGCACTGGCTGCTGGAGTTTATACTACTAGGGAA
GGTGCGAGGGTTACATGGAGTTACATAAATAGAATCTTGGGTCAGCCTTCGCTGATCCGT
GAGTCATCAATGTCAAAGTTCCCACTACCAATGTCTAGGCTACTCAAACCTAGTTCAGCA
TCTTTGTCGGAGGGAGCAGGCTTTGAGAAAGTTATCCTGCACCCTTCACTAAAGCGGAGG
ATTGAACATCTTGCACGAGCAACTGCAAATACGAAGTCTCATGGTGCACCATTCCGCAAC
ATGCTGTTCTATGGACCTCCTGGAACTGGCAAAACTTTAGTAGCCAGGGAGATGGCTCGC
AAATCTGGCCTGGACTATGCCATGATGACGGGAGGAGATGTTGCACCCTTAGGATCAGAG
GCTGTTACCAAGATCCATCAAATATTTGACTGGGCTAAGAAGTCCAAAAAAGGCATGCTT
GTTTTCATTGATGAAGCTGATGCATTCTTGTGCGAGCGTAACAGTACCCATATGAGCGAA
GCTCAGCGGAGTGCTCTCAATGCATTATTGTTTCGAACTGGCGACCAGTCCAGGGATATT
GTCCTTGTCCTGGCAACAAACAGACCGGGTGACCTTGATGCTGCTATCACTGACCGCATT
GATGAAGTCATAGAGTTCCCCCTGCCTGGGGAGGAGGAGAGGTTTCAACTGCTCAAGCTA
TACTTGAACCAATATATACTCAAGGAAGAGGGCAAAGGATCTTCTTGGAGTGCATTATTC
AAGAAGCAGCAGCGGAAGATTCAGGTCAATGGCATAAGCGATGATTTGCTCAGGGAAGCT
GCAAGGAAGATCGACGGTTTCTCTGGCAGGGAGATTGCGAAGCTGGTGGCTAGTGTGCAA
GCTGCTGTTTATGGGCGGCCTGACTGTATATTGGACCCCCAGTTATTTTCAGAGGTAGTT
GACTACAAAGTGACTGAGCATCACCAACGCATCAAGCTTGCTTCAGAGGGTATGGTTTGA

Peptide Sequence

PEP ID

Zm00001d051572_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:4:163135825:163140188:1 gene:Zm00001d051572 transcript:Zm00001d051572_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:AAA-type ATPase family protein
Sequence

MRKQEETRLTELEVEKVQYAIYEKLRDIERMQKKAEDYRNSLQQEAQAKAQALRFEDELA
RKRMQTDHAAQRRQDAELVKMQEASALRREEARRATEQKILEEMIRTEKEKAEIDQETNR
VKAIAEAEARVHEDKQSEEVVKRMLLERMKGEKEKWLTAINTTFSHIEGGFKALLTDRSK
LMMGIGGVTALAAGVYTTREGARVTWSYINRILGQPSLIRESSMSKFPLPMSRLLKPSSA
SLSEGAGFEKVILHPSLKRRIEHLARATANTKSHGAPFRNMLFYGPPGTGKTLVAREMAR
KSGLDYAMMTGGDVAPLGSEAVTKIHQIFDWAKKSKKGMLVFIDEADAFLCERNSTHMSE
AQRSALNALLFRTGDQSRDIVLVLATNRPGDLDAAITDRIDEVIEFPLPGEEERFQLLKL
YLNQYILKEEGKGSSWSALFKKQQRKIQVNGISDDLLREAARKIDGFSGREIAKLVASVQ
AAVYGRPDCILDPQLFSEVVDYKVTEHHQRIKLASEGMV

Transcript Sequence

Transcript ID

Zm00001d051572_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:163135825:163140188:1 gene:Zm00001d051572 gene_biotype:protein_coding transcript_biotype:protein_coding description:AAA-type ATPase family protein
Sequence

GGCCGCGATCCGGAGACCCTGGAGCGCATGGCCCGAGCGCTGCGGGAGATCAACAACTCA
CCGCTCGCCAAGCAGGCAAGGTGCCCGCCCTTTTGCTCCACCAAACGGAGTCTGCCCCCT
CCTGACGTTGTTGTGTTGTTGTTGCTCGTGTGCAGGTGTTTGAACTGATGCGGAAGCAGG
AGGAGACGCGCCTCACTGAGCTGGAGGTCGAGAAGGTCCAATACGCCATCTATGAGAAGC
TGAGGGACATCGAAAGGATGCAGAAAAAAGCTGAAGATTACAGAAATAGTTTGCAACAAG
AAGCACAAGCAAAAGCTCAAGCATTACGCTTTGAGGATGAATTAGCTAGAAAAAGAATGC
AGACAGATCATGCTGCACAGAGGCGACAGGATGCTGAACTCGTGAAGATGCAAGAGGCAT
CTGCCCTCAGGAGAGAAGAAGCTAGGCGTGCAACAGAACAGAAGATTTTGGAAGAAATGA
TACGTACTGAGAAGGAAAAGGCTGAAATAGATCAGGAAACAAACAGAGTTAAAGCTATAG
CTGAAGCAGAAGCTCGTGTTCATGAAGACAAGCAATCAGAAGAAGTTGTTAAAAGAATGT
TATTGGAACGCATGAAGGGTGAAAAGGAAAAGTGGCTCACTGCAATAAATACAACATTTT
CGCACATTGAAGGTGGATTCAAAGCACTGTTAACTGATAGGAGCAAACTAATGATGGGTA
TTGGAGGAGTTACTGCACTGGCTGCTGGAGTTTATACTACTAGGGAAGGTGCGAGGGTTA
CATGGAGTTACATAAATAGAATCTTGGGTCAGCCTTCGCTGATCCGTGAGTCATCAATGT
CAAAGTTCCCACTACCAATGTCTAGGCTACTCAAACCTAGTTCAGCATCTTTGTCGGAGG
GAGCAGGCTTTGAGAAAGTTATCCTGCACCCTTCACTAAAGCGGAGGATTGAACATCTTG
CACGAGCAACTGCAAATACGAAGTCTCATGGTGCACCATTCCGCAACATGCTGTTCTATG
GACCTCCTGGAACTGGCAAAACTTTAGTAGCCAGGGAGATGGCTCGCAAATCTGGCCTGG
ACTATGCCATGATGACGGGAGGAGATGTTGCACCCTTAGGATCAGAGGCTGTTACCAAGA
TCCATCAAATATTTGACTGGGCTAAGAAGTCCAAAAAAGGCATGCTTGTTTTCATTGATG
AAGCTGATGCATTCTTGTGCGAGCGTAACAGTACCCATATGAGCGAAGCTCAGCGGAGTG
CTCTCAATGCATTATTGTTTCGAACTGGCGACCAGTCCAGGGATATTGTCCTTGTCCTGG
CAACAAACAGACCGGGTGACCTTGATGCTGCTATCACTGACCGCATTGATGAAGTCATAG
AGTTCCCCCTGCCTGGGGAGGAGGAGAGGTTTCAACTGCTCAAGCTATACTTGAACCAAT
ATATACTCAAGGAAGAGGGCAAAGGATCTTCTTGGAGTGCATTATTCAAGAAGCAGCAGC
GGAAGATTCAGGTCAATGGCATAAGCGATGATTTGCTCAGGGAAGCTGCAAGGAAGATCG
ACGGTTTCTCTGGCAGGGAGATTGCGAAGCTGGTGGCTAGTGTGCAAGCTGCTGTTTATG
GGCGGCCTGACTGTATATTGGACCCCCAGTTATTTTCAGAGGTAGTTGACTACAAAGTGA
CTGAGCATCACCAACGCATCAAGCTTGCTTCAGAGGGTATGGTTTGATCAGTAAGAAATA
TTTACCT