Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d051556_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:162737448:162739364:-1 gene:Zm00001d051556 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:nine-cis-epoxycarotenoid dioxygenase6 description: nine-cis-epoxycarotenoid dioxygenase6
Sequence	ATGGAGAGAACACTGATCACCTCTAACCTCTGCTTGAGTGCACACGCTTCAAGATCGTCC CGGAGGGTTCACTACATCCCTCCTTCCGCCTCTGCTGCTGCACACAACTCCAGCTACAGG AAGAAGAGTGCCCCGTCTCTGCCGCCGTCGGCCGCCGCATCTGCCACTGTTGTCACCGCC CCTCCGTCCACTGACAATGTCCAGTCCACTGCTCCGAAACAGACCGGGCGACAGGAGCTG GAAGATCTCGTGGCCGCCAAGACCAGCACTTCAAGAACTGCACGTGCGCCGAGCCAGGCT CGGGCTCGGGCTCGGGCTGAGCCTCGCCGCCGGCCTGCCCCGGCAGCCACGTCCCTGCCA ATGGCGTTCTGCAGCGCGCTGGAGGAGGCGATCAACACGTTCGTCGACCCTCCGGCGCTG CGGCCGTCCGTGGACCCCCGGAACGTGCTGTCGACCAACTTCGCGCCAGTGGACGAGCTG CCGCCGACGCCCTGCCCCGTCGTGCGCGGCGCCATCCCGCGCTGCCTCGCCGGGGGCGCC TACATCCGCAACGGGCCCAACCCGCAGCACCTCCCCCGTGGGCCGCACCACCTCTTCGAC GGCGACGGCATGCTGCACTCGCTCCTCCTCCCGACGGCGGGGTCCCCGCCGTCGTCGGAC CCCGTCCTCTGCTCGCGCTACGTGCAGACGTACAAGTACCTCGTGGAGCGTGACGCGGGA GCGCCGGTCATGCCGAACGTCTTCTCGGGTTTCCACGGCGTGGCCGGCCTGGCGCGCGGC GCCGTCGTGGCGGCCAGAGTGCTCACCGGGCAGATGAACCCAGCCGAGGGCGTGGGGCTC GCTAACACCAGCCTCGCCTTCTTCGGCGGCCGCCTCTACGCGCTTGGCGAGTCGGATCTC CCGTACACCGTGCGCGTCGACCCGGCCACCGGCGAGGTGACCACGCACGGCCGGTGCGAC TTCGGCGGCCGCCTCTTCATGGGCATGACCGCTCACCCGAAGAAAGACCCCGTCACCGGC GAGGTCTTCGCGTTCCGCTACGGCCCCGTGCCGCCGTTCGTCACCTACTTCCGGTTCGAC CCGGCCGGGAACAAGGGCCCCGACGTGCCCATCTTCTCGGTGCAGCAGCCGTCGTTCCTG CACGACTTCGCCGTCACGGAGCGGTACGCCATCTTCCCGGAGATACAGATCGTCATGCAG CCCATGGGCATGGTGACGGGCGGCGCGCCCGTGGGGTCTGACTCCGGCAAGGTGCCCCGG CTCGGCGTGCTCCCGAAGTACGCCACGGACGAGTCGGAGATGCGGTGGTTCGAGGTGCCG GGCTTCAACATGATGCACTCGCTGAACGCGTGGGAGGAGGCCGACGGCGAGGAGCTGGTG CTGGTGGCCCCTAACGTCCTGTCCGTGGAGCACGCGCTGGAGCGCATGGAGCTCGTGCAC TCCTGCGTCGAGAAGGTGCGCATGAACCTGCGCACGGGCGCCGTGTCGCGCACCCCGCTC TCGGCGGGGAACCTCGACTTCGGCGTGATCCACCCGGGCTACCTTGGCCGGCGCAACCGG TACGGATACCTCGGCATCGGCGACCCCATGCCGAAGATCTCCGGAGTGGCCAAGCTGGAC TTGGACCGCGCCGGCACGGGCGACTGCACGGTGGCGCGGCGCGACTTCGGGCCCGGGTGC TTCGCGGGGGAGCCGTTCTTCGTCCCCGACGACGTGGAGGGGGACGGCAACGAGGACGAC GGCTACTTAGTGTGCTACGTCCACAACGAGCGCACCGGCGAGAACCAGTTCGTGGTGATG GACGCGAGGTCGCCGCAGCTGGACATCGTCGCCGAGGTGCAGCTGCCAGCGCGCGTCCCC TATGGCTTCCACGGCATGTTTGTCACGCAGGCCGAGCTCCAGGCGCAGCAGCAATGA

Peptide Sequence

PEP ID	Zm00001d051556_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:162737448:162739364:-1 gene:Zm00001d051556 transcript:Zm00001d051556_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:nine-cis-epoxycarotenoid dioxygenase6 description: nine-cis-epoxycarotenoid dioxygenase6
Sequence	MERTLITSNLCLSAHASRSSRRVHYIPPSASAAAHNSSYRKKSAPSLPPSAAASATVVTA PPSTDNVQSTAPKQTGRQELEDLVAAKTSTSRTARAPSQARARARAEPRRRPAPAATSLP MAFCSALEEAINTFVDPPALRPSVDPRNVLSTNFAPVDELPPTPCPVVRGAIPRCLAGGA YIRNGPNPQHLPRGPHHLFDGDGMLHSLLLPTAGSPPSSDPVLCSRYVQTYKYLVERDAG APVMPNVFSGFHGVAGLARGAVVAARVLTGQMNPAEGVGLANTSLAFFGGRLYALGESDL PYTVRVDPATGEVTTHGRCDFGGRLFMGMTAHPKKDPVTGEVFAFRYGPVPPFVTYFRFD PAGNKGPDVPIFSVQQPSFLHDFAVTERYAIFPEIQIVMQPMGMVTGGAPVGSDSGKVPR LGVLPKYATDESEMRWFEVPGFNMMHSLNAWEEADGEELVLVAPNVLSVEHALERMELVH SCVEKVRMNLRTGAVSRTPLSAGNLDFGVIHPGYLGRRNRYGYLGIGDPMPKISGVAKLD LDRAGTGDCTVARRDFGPGCFAGEPFFVPDDVEGDGNEDDGYLVCYVHNERTGENQFVVM DARSPQLDIVAEVQLPARVPYGFHGMFVTQAELQAQQQ

Transcript Sequence

Transcript ID	Zm00001d051556_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:162737448:162739364:-1 gene:Zm00001d051556 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:nine-cis-epoxycarotenoid dioxygenase6 description: nine-cis-epoxycarotenoid dioxygenase6
Sequence	ATGGAGAGAACACTGATCACCTCTAACCTCTGCTTGAGTGCACACGCTTCAAGATCGTCC CGGAGGGTTCACTACATCCCTCCTTCCGCCTCTGCTGCTGCACACAACTCCAGCTACAGG AAGAAGAGTGCCCCGTCTCTGCCGCCGTCGGCCGCCGCATCTGCCACTGTTGTCACCGCC CCTCCGTCCACTGACAATGTCCAGTCCACTGCTCCGAAACAGACCGGGCGACAGGAGCTG GAAGATCTCGTGGCCGCCAAGACCAGCACTTCAAGAACTGCACGTGCGCCGAGCCAGGCT CGGGCTCGGGCTCGGGCTGAGCCTCGCCGCCGGCCTGCCCCGGCAGCCACGTCCCTGCCA ATGGCGTTCTGCAGCGCGCTGGAGGAGGCGATCAACACGTTCGTCGACCCTCCGGCGCTG CGGCCGTCCGTGGACCCCCGGAACGTGCTGTCGACCAACTTCGCGCCAGTGGACGAGCTG CCGCCGACGCCCTGCCCCGTCGTGCGCGGCGCCATCCCGCGCTGCCTCGCCGGGGGCGCC TACATCCGCAACGGGCCCAACCCGCAGCACCTCCCCCGTGGGCCGCACCACCTCTTCGAC GGCGACGGCATGCTGCACTCGCTCCTCCTCCCGACGGCGGGGTCCCCGCCGTCGTCGGAC CCCGTCCTCTGCTCGCGCTACGTGCAGACGTACAAGTACCTCGTGGAGCGTGACGCGGGA GCGCCGGTCATGCCGAACGTCTTCTCGGGTTTCCACGGCGTGGCCGGCCTGGCGCGCGGC GCCGTCGTGGCGGCCAGAGTGCTCACCGGGCAGATGAACCCAGCCGAGGGCGTGGGGCTC GCTAACACCAGCCTCGCCTTCTTCGGCGGCCGCCTCTACGCGCTTGGCGAGTCGGATCTC CCGTACACCGTGCGCGTCGACCCGGCCACCGGCGAGGTGACCACGCACGGCCGGTGCGAC TTCGGCGGCCGCCTCTTCATGGGCATGACCGCTCACCCGAAGAAAGACCCCGTCACCGGC GAGGTCTTCGCGTTCCGCTACGGCCCCGTGCCGCCGTTCGTCACCTACTTCCGGTTCGAC CCGGCCGGGAACAAGGGCCCCGACGTGCCCATCTTCTCGGTGCAGCAGCCGTCGTTCCTG CACGACTTCGCCGTCACGGAGCGGTACGCCATCTTCCCGGAGATACAGATCGTCATGCAG CCCATGGGCATGGTGACGGGCGGCGCGCCCGTGGGGTCTGACTCCGGCAAGGTGCCCCGG CTCGGCGTGCTCCCGAAGTACGCCACGGACGAGTCGGAGATGCGGTGGTTCGAGGTGCCG GGCTTCAACATGATGCACTCGCTGAACGCGTGGGAGGAGGCCGACGGCGAGGAGCTGGTG CTGGTGGCCCCTAACGTCCTGTCCGTGGAGCACGCGCTGGAGCGCATGGAGCTCGTGCAC TCCTGCGTCGAGAAGGTGCGCATGAACCTGCGCACGGGCGCCGTGTCGCGCACCCCGCTC TCGGCGGGGAACCTCGACTTCGGCGTGATCCACCCGGGCTACCTTGGCCGGCGCAACCGG TACGGATACCTCGGCATCGGCGACCCCATGCCGAAGATCTCCGGAGTGGCCAAGCTGGAC TTGGACCGCGCCGGCACGGGCGACTGCACGGTGGCGCGGCGCGACTTCGGGCCCGGGTGC TTCGCGGGGGAGCCGTTCTTCGTCCCCGACGACGTGGAGGGGGACGGCAACGAGGACGAC GGCTACTTAGTGTGCTACGTCCACAACGAGCGCACCGGCGAGAACCAGTTCGTGGTGATG GACGCGAGGTCGCCGCAGCTGGACATCGTCGCCGAGGTGCAGCTGCCAGCGCGCGTCCCC TATGGCTTCCACGGCATGTTTGTCACGCAGGCCGAGCTCCAGGCGCAGCAGCAATGA