Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d051542_T059
CDS Infomation	cds chromosome:B73_RefGen_v4:4:161946663:161954333:1 gene:Zm00001d051542 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA topoisomerase 2
Sequence	ATGATTGCAGTTGAGAAATCTAGTGTAATCGATAATGTCCTCTCTTGGGCTGATTTCAAA CTTAGCAAAGAATTAAAGAAGACTGATGGAAGCAAGAAGTCAAGAATTTCTGGCATCCCT AAGCTTGAGGATGCAAATGAAGCTGGTGGGAAGGACTCTCACAAGTGCACCTTGATTCTG ACTGAGGGTGACTCTGCAAAAGCTCTTGCTATGTCGGGCATAGCTGTTGTAGGGAGAGAT TACTATGGTGTATTTCCTCTCAGGGGAAAACTATTGAATGTCAGAGAGGCAAACCACAAG CAGATAATGGACAACGCTGAAATTCAGAACATAAAGCAAATCCTTGGTTTGCAGCATGGA AAGCAGTATGATAGCACCAAAGGTTTGAGATACGGCCATCTCATGATAATGACAGATCAG GATCACGATGGTTCCCACATCAAAGGGTTGCTGATCAATTTCATTCACTCATTCTGGCCA TCACTTCTTAAAGTTCCATCTTTCTTGGTTGAGTTCATTACTCCAATTATCAAGGCAACC AGAGGCCAAACTACTAAGTCATTCTACACGTTGCCAGAGTATGAAGAATGGAGAAATAAT TTAGGAGCAAGTGCAAGTTCATGGACTATAAAATACTACAAGGGGTTAGGAACAAGCACA GCCAAAGAAGGCCGAAAGTACTTCGAAGATATTACTGAACATAAAAAAGATTTTCTCTGG GTAGATGACCAAGATGGCAATCATATTGAATTAGCATTCAGCAAGAAACGGATTGCTGAT AGGAAACAGTGGCTTACAAATTTTCAGCCTGGGACATACATTGACCAACGTGACAAACAT GTCAAGTATAGCGATTTCATCAACAAAGAGCTGATACTCTTCTCAATGGCAGACCTGCAG CGATCAATACCTTCAATGGTTGACGGCCTTAAACCAGGCCAGAGGAAAATTCTGTTTTGC TCATTCAAGAGGAATTTTGTTAAGGAAGCTAAGGTGGCTCAGTTCTCTGGTTATGTGTCA GAACACTCAGCATACCATCATGGTGAGCAGAGTTTAGCAGGTACAATTATTGGAATGGCT CAGAACTTTGTTGGCAGCAATAACATCAACCTTATGTACCCTAGTGGTCAGTTTGGCACC AGAGCTCAGGGGGGCAAGGATGCTGCGAGTCCTAGGTACATCTTCACCAAGCTGTCTCAT ATCACACGTTCAATTTTTCCGAAGGATGATGATATTCTTCTTAATTATCTGAATGAGGAT GGGCAGTCAATTGAACCCACCTGGTATATGCCAATCCTTCCTATGGTCTTGGTCAATGGT AGTGAAGGAATTGGAACTGGATGGAGCACATATATTCCAAACTACAATCCAAGAGACATT CTTGCTAACCTCAGGCGATTGCTGAATGGAGAGTCTACTGTACCAATGCACCCATGGTAC AGGGGATTTAAGGGCTCTATAGAGAAGACAGTCAATACAAAGGTAGCTGGTTCCACATAT ACTGTCACTGGAATCATTGAGGTTCTTGACAACACTACACTGAGGATCACTGAATTGCCA ATCCGCCGTTGGACTCAGGATTACAAAGATTATCTTGAGAGTTTGGCTCCAGATACTAAG AACAAGGACAAAGTACCATTCATAGAGGTCGTTGAAAACAAAAACGCTTCCAATTGTGTT CATAAATTTTCCACCGTCATAAATGCTATTCCTCAATTGCAACTATTTTACAGGATGTCA CATGTCAAGGTGATAATGAAGATGTTTACATTCAGTTCACATTAA

Peptide Sequence

PEP ID	Zm00001d051542_P059
PEP Infomation	pep chromosome:B73_RefGen_v4:4:161946663:161954333:1 gene:Zm00001d051542 transcript:Zm00001d051542_T059 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA topoisomerase 2
Sequence	MIAVEKSSVIDNVLSWADFKLSKELKKTDGSKKSRISGIPKLEDANEAGGKDSHKCTLIL TEGDSAKALAMSGIAVVGRDYYGVFPLRGKLLNVREANHKQIMDNAEIQNIKQILGLQHG KQYDSTKGLRYGHLMIMTDQDHDGSHIKGLLINFIHSFWPSLLKVPSFLVEFITPIIKAT RGQTTKSFYTLPEYEEWRNNLGASASSWTIKYYKGLGTSTAKEGRKYFEDITEHKKDFLW VDDQDGNHIELAFSKKRIADRKQWLTNFQPGTYIDQRDKHVKYSDFINKELILFSMADLQ RSIPSMVDGLKPGQRKILFCSFKRNFVKEAKVAQFSGYVSEHSAYHHGEQSLAGTIIGMA QNFVGSNNINLMYPSGQFGTRAQGGKDAASPRYIFTKLSHITRSIFPKDDDILLNYLNED GQSIEPTWYMPILPMVLVNGSEGIGTGWSTYIPNYNPRDILANLRRLLNGESTVPMHPWY RGFKGSIEKTVNTKVAGSTYTVTGIIEVLDNTTLRITELPIRRWTQDYKDYLESLAPDTK NKDKVPFIEVVENKNASNCVHKFSTVINAIPQLQLFYRMSHVKVIMKMFTFSSH

Transcript Sequence

Transcript ID	Zm00001d051542_T059
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:161946663:161954333:1 gene:Zm00001d051542 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA topoisomerase 2
Sequence	GCGCAGGCACACGACCTCCGTGTGCAGCGCATCGCCGCCATGACGGGTCCCTTACACTCC AGCTCCGGCCACAACGCCGCCGCCGGCGGCGGGGGCAAGACCATCGAGGAAATGTACCAG AAGAAGACGCAGCTGGAGCACATCCTGCTGCGCCCTGACACCTACATTGGCTCGGTGGAG AAGCATACCCAGACGCTCTGGGTCTACGAGGACGGCGCCATGGTGAACCGCTCCGTCACC TACGTCCCTGGACTCTACAAGATCTTCGACGAGATCCTCGTCAACGCCGCCGACAACAAG CAGCGGGATCCCAAGATGGACGCGCTCCGCGTCGAGATCGACGTCGACGGCTGCTCCATC TCCGTATACAACAACGGCGACGGGATACCCGTCGAGGTCCACCAGGAGGAGGGCGTCTAC GTGCCAGAGATGATTTTCGGCCACCTCCTCACCAGTAGCAACTACAACGACAACGAGAAG AAGACAACCGGCGGGAGGAACGGATACGGCGCCAAACTCACTAACATCTTCTCCACGGAG TTCGTCATCGAGACCGCTGATGGACGTCGCCAAAAGAAGTACAAGCAGGTTTTCTCTGAA AACATGGGGAAGAAGTCAGAGCCCCAGATTACCAAGTGCAAGCAGGGCGAGAACTGGACC AGGGTCACCTTCAAGCCTGATCTTGCCAAGTTCAACATGATCCATCTCGAAGATGATGTT GTAGCCCTCATGAGGAAGAGAGTGGTTGATATGGCAGGCACTCTTGGCAAAACAGTGAAG GTTGAGTTGGATGGGCACAGGGTGCCCATAAAGAGCTTCTGTGATTATGTCGACCTGTAT ATGAAGAGTGCTAACTGTGACAGACCTGATAATTTCAAAAAGATTTATGAGCAAGTAAAT GATCGGTGGGAAGTGTGTGTTAGTCAAAGCGAAGGGCAGTTTCAGCAGGTCAGCTTTGTC AACAGAATTGCCACCATAAGGGGTGGAACTCATGTTGATTATGTCACCAATCAAATTGCC ACCCATGTGATGGCTTTTGTGAATAAGAAAAACAAGAATGCAAACATGAAGCTACACAAT GTGAAGAGCCATTTGTGGGTCTTTGTCAATGCGCTGATTGACAATCCGGCCTTTGATTCA CAGACCAAGGAGACCTTGACCACTCGTCAGGGAAGCTTTGGGTCAAAGTGTGAGCTTTCT AGTGATTTCCTCAAGAAAGGTATGCCATGCAGAACATTACAGTTTGTCATCAGATTTTTG CTTCTCAATTAATGCTAACACTCACTTTGAATGATTGCAGTTGAGAAATCTAGTGTAATC GATAATGTCCTCTCTTGGGCTGATTTCAAACTTAGCAAAGAATTAAAGAAGACTGATGGA AGCAAGAAGTCAAGAATTTCTGGCATCCCTAAGCTTGAGGATGCAAATGAAGCTGGTGGG AAGGACTCTCACAAGTGCACCTTGATTCTGACTGAGGGTGACTCTGCAAAAGCTCTTGCT ATGTCGGGCATAGCTGTTGTAGGGAGAGATTACTATGGTGTATTTCCTCTCAGGGGAAAA CTATTGAATGTCAGAGAGGCAAACCACAAGCAGATAATGGACAACGCTGAAATTCAGAAC ATAAAGCAAATCCTTGGTTTGCAGCATGGAAAGCAGTATGATAGCACCAAAGGTTTGAGA TACGGCCATCTCATGATAATGACAGATCAGGATCACGATGGTTCCCACATCAAAGGGTTG CTGATCAATTTCATTCACTCATTCTGGCCATCACTTCTTAAAGTTCCATCTTTCTTGGTT GAGTTCATTACTCCAATTATCAAGGCAACCAGAGGCCAAACTACTAAGTCATTCTACACG TTGCCAGAGTATGAAGAATGGAGAAATAATTTAGGAGCAAGTGCAAGTTCATGGACTATA AAATACTACAAGGGGTTAGGAACAAGCACAGCCAAAGAAGGCCGAAAGTACTTCGAAGAT ATTACTGAACATAAAAAAGATTTTCTCTGGGTAGATGACCAAGATGGCAATCATATTGAA TTAGCATTCAGCAAGAAACGGATTGCTGATAGGAAACAGTGGCTTACAAATTTTCAGCCT GGGACATACATTGACCAACGTGACAAACATGTCAAGTATAGCGATTTCATCAACAAAGAG CTGATACTCTTCTCAATGGCAGACCTGCAGCGATCAATACCTTCAATGGTTGACGGCCTT AAACCAGGCCAGAGGAAAATTCTGTTTTGCTCATTCAAGAGGAATTTTGTTAAGGAAGCT AAGGTGGCTCAGTTCTCTGGTTATGTGTCAGAACACTCAGCATACCATCATGGTGAGCAG AGTTTAGCAGGTACAATTATTGGAATGGCTCAGAACTTTGTTGGCAGCAATAACATCAAC CTTATGTACCCTAGTGGTCAGTTTGGCACCAGAGCTCAGGGGGGCAAGGATGCTGCGAGT CCTAGGTACATCTTCACCAAGCTGTCTCATATCACACGTTCAATTTTTCCGAAGGATGAT GATATTCTTCTTAATTATCTGAATGAGGATGGGCAGTCAATTGAACCCACCTGGTATATG CCAATCCTTCCTATGGTCTTGGTCAATGGTAGTGAAGGAATTGGAACTGGATGGAGCACA TATATTCCAAACTACAATCCAAGAGACATTCTTGCTAACCTCAGGCGATTGCTGAATGGA GAGTCTACTGTACCAATGCACCCATGGTACAGGGGATTTAAGGGCTCTATAGAGAAGACA GTCAATACAAAGGTAGCTGGTTCCACATATACTGTCACTGGAATCATTGAGGTTCTTGAC AACACTACACTGAGGATCACTGAATTGCCAATCCGCCGTTGGACTCAGGATTACAAAGAT TATCTTGAGAGTTTGGCTCCAGATACTAAGAACAAGGACAAAGTACCATTCATAGAGGTC GTTGAAAACAAAAACGCTTCCAATTGTGTTCATAAATTTTCCACCGTCATAAATGCTATT CCTCAATTGCAACTATTTTACAGGATGTCACATGTCAAGGTGATAATGAAGATGTTTACA TTCAGTTCACATTAAGTGAGAAAAATATGAATATAGCTATGGAAGAAGGACTAGTGAAGA AGTTTAAGCTGACAACAACAATTGGGACATCAAATATGCACTTGTTTGATTCAGATGGTA AAATTCGGAAGTATGACACTCCCGAGCAAATACTTGAGGAGTTCTGTCATTTAAGGCTTG AATTCTATTGTAAGAGAAAGGAAGCATTGTTGAAAAGCATCAAGTTGGACTTAAAGAAGC TTGAAAACAAAGTTAGGTTTATCCGCTGTGTTGTTGATAATGAAATTATAGTTAACAACC GGAAAAGGGCAGATCTATTTTTGGAGCTTCGGCAGAAGAATTTTGATCCTTTCCCAAAGA AAAAAAAGAGGGCTGAACCAGCTGCTGTAGGTGCTTTAGAAGAGGAGGAAAATGAAGAGA GTCCTGAAGCTGCTGGAGCGGAACCTAGTGACTATGAGTATCTCCTCTCAATGTCAATTG GTACGTTGACTTTGGAAAAGATACAGGAGCTTAATGCTGAGAAACAAAAATTAGTGGATG ATGTTGAGGAATTGGAGAATATGTCACCAAAATCACTATGGTTGAAAGATCTTGATGCTT TTGAGAAAGAACTGGATGTGCTTGATCAAATGGATCTAGCAGAGGAACTGCAAAGGGAAA AGAGGATAAATGCTGGCAAAAAAGGAGGATCAAAAGCTGCACCCAAGAAACCACGTAAAA AGGCTGCATCTAAAAAGCTGGATAGCGATACAGAAGATGATGATTTTGAACCAGCGGTTG CAAAGCGTGGAGCTCAACCGAAGAAAACATCCAGCAAGGTACTGTCAAAGTAGAATTTGT CATCGTGGTCTATTTGAATGATAAAATGGAGAGTTTTCTGTAAAAAAAAATAGCTGATGG ATTCTGTAACTTTGCAGCCATGGAAACTGAAGTAACAGAATTGACAGCTCAGAAGAAAGG TAGAGGAAGGAAGCCTGCTGCCGTTGTGAAGCCCAAGGCTCCTGCCGCCGCCAGGAAAAG GGCGCCGGCTCAGGGCAAGGTAACACAGAAGAAAATAGATGAGATGCTCAAGGCCACTGA GGATAACAACACCAGTGCATCTTCCCCTGAGAAGAAGGTCCGGAAGATGAGGTCCTCTCC CTTCAACAAGAAGAGCGGCTCAATCTTACAGAGAGGCTCGACCGCTTCTGCAAGCTCTGG AACAACTGTTGAAGCTTCACCACCCTCTGGCAGCTCTGCAGAGCCAGTTGGTGCTGCACA ACCTAGAAGGACAGCCAGGGCTACCAAGAAGCCTATCTATATTAGCGATAGCGACCCTGA GGATGAAGTGGAGTTGATTGATGATTCGGACTTTGATGCGGACGGTGACTCTGACGAGTG AAGATTGTAGTCATCCGTACCATGTGACAATTTGATAATGCATTTCTTGTGCGTTGTATG TGTTCGTTGCGTTGTTCAGAACTGTTGCCAAGAGCTCAAGACAACCTGGTTAACTGGTTA ACTGAATTGTATGTCTAATTT