Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d051532_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:4:161648710:161651033:-1 gene:Zm00001d051532 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGGTGGGAGGTCTAGTTCTGTCCCAGGCGCAGACGCACCATACCGCCGCGCCAAGAACC GCCGCACCGGCGCCGGCACAGGCGTTGGAGAAGCGGCCGAGGGACCAGGCCCAGCCATGT GGCACAGCGGCGGCGGCCGTCTCGGTGCGGAGCTTGGACGAGGTCAGGAAGGCGCACGCG CGGCACATCAAGCTGGGCCTCGACCGCTCCCCACGGCACGCGCGGCCGCTGCTCGCGGCG TGTGCGCTCTCGGGCTGGCCGGGCGGCATGGAGCTCGCGGCGTCCATCTTCGAGTCGCTC GTCGAGCCGGAGGCCTTCGATTACAACACCCTGATGCGCGGCCACGTCGGTGGCGGCCGT GAACCGGCGGCCGCGCTGCGCATGTACGTTGACATGCTGGAGGCGGGCGTCCGGCCTGAC AGCTACACGTTCCCGTTCGCACTCAAGGCGTGCGCGCAGCTCGCGGCCTTGCAAGAAGGG AGACAGTTGCAGGCGCACATCGTGAAGCTCGGGTTCCAGCACGACGAACACGTGCAGAAC AGCCTGATCAGCTTCTACGGCAAGTGCGTCGAGCCGGCGATGGCTCGTCTGGCGTTTGAC CGGGTGGAGGCGGAGGAGCGAACGGCGGCTTCCTGGAGCGCACTCCTCGCGGCGTACACG AAAGCCGGGCTGTGGGGCGAATGCCTCGAGTCGTTCGGCGCGATGGTGCTCGATGGGTGG CGTCCCGACGAGAGCTCCACGGTCAGCGCGCTCTCGGCGTGCGCGCACCTGGGTGCCTTC GACGTCGGGCGGAGTCTCCACTGCGCGTTGCTGAGGAACACCGCGAGGCTGAACACCATC ATGCAGACGTCCCTGGTGGACATGTACGCCAAGTGCGGCAGCATCGAGAAGGCCGCGGCG GTGTTCGACGCGATGGACGACAAGAACGCGTGGACGTACAGCGCCATGCTGTCCGGCTTG GCGCTGCACGGGGACGGGCGGAAGGCCCTGCAGGTGTTCGACGCGATGGTCCGGGAGCGC CACGCGCCCGACGCAGCCACGTACGTCGGCGTGCTGAACGCCTGCAGCCGCGCCGGGCTG CTCGAGGACGGGCTGCGGTGCTTCGACCGCATGCGGCTGGAGCACAACGTCGCGCCCAAC GCGCAGTACTACGGCTGCATGGTGGACCTGATGGCGCGCGCCGGAAGGCTGGACGACGCG CGCGCGCTCATCGGGAGCATGTCCACGGGGCCGACGGACACGGCCTGGCGAAGCCTGCTG AACGCCTGCCGGATCCACGGCGATCTGGATCTCGCCGAGCGCGCCCTCCAGGAGCTGAGG CGCCTCGGCGCCGCGAACGCCGGCGACTACGTCATCGTCGCGGACATGCACGCCAGGGCC AAGGACTGGGCCGCTGCCGCCCAGCTCCGGACAGAGGCGGTGGACTGGGGCCTCGCGCAA TCCCCCGGGGTCAGCGCCGTGGAGGTACGCGGCGAGCTGCACCGGTTCGTGTCGCAGGAC AGGTCGCACCCGCGGACGAGCGACATCTACGAGATGCTCCACCAGATGGAGTGGCAGCTG CGGTTCGATGGCTACAAACCTGACACGTCGGAGGTGGCGCTGGACGTGGGCGAAGAGGAG AAGCGGCGTGTGGTCGCCGCGCACAGCCAGAAGCTGGCCATGGCATTCGGCCTGCTCAGC ACGGCGGAGGGGGCACCGGTGAGGATCGTGACCAACCTCCGGATGAGCAAGGAATGCCAC GCGTACAGCGCGCTGATCTCGGAAATTTTCGGCCGGGAGATCGTCATCAGGGACCGGAAC CGCCTCCACCGGTTCCGGCGCGGCGTCTGCAGTTGCAGAGACTACTGGTAA

Peptide Sequence

PEP ID	Zm00001d051532_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:4:161648710:161651033:-1 gene:Zm00001d051532 transcript:Zm00001d051532_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	MVGGLVLSQAQTHHTAAPRTAAPAPAQALEKRPRDQAQPCGTAAAAVSVRSLDEVRKAHA RHIKLGLDRSPRHARPLLAACALSGWPGGMELAASIFESLVEPEAFDYNTLMRGHVGGGR EPAAALRMYVDMLEAGVRPDSYTFPFALKACAQLAALQEGRQLQAHIVKLGFQHDEHVQN SLISFYGKCVEPAMARLAFDRVEAEERTAASWSALLAAYTKAGLWGECLESFGAMVLDGW RPDESSTVSALSACAHLGAFDVGRSLHCALLRNTARLNTIMQTSLVDMYAKCGSIEKAAA VFDAMDDKNAWTYSAMLSGLALHGDGRKALQVFDAMVRERHAPDAATYVGVLNACSRAGL LEDGLRCFDRMRLEHNVAPNAQYYGCMVDLMARAGRLDDARALIGSMSTGPTDTAWRSLL NACRIHGDLDLAERALQELRRLGAANAGDYVIVADMHARAKDWAAAAQLRTEAVDWGLAQ SPGVSAVEVRGELHRFVSQDRSHPRTSDIYEMLHQMEWQLRFDGYKPDTSEVALDVGEEE KRRVVAAHSQKLAMAFGLLSTAEGAPVRIVTNLRMSKECHAYSALISEIFGREIVIRDRN RLHRFRRGVCSCRDYW

Transcript Sequence

Transcript ID	Zm00001d051532_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:161648710:161651033:-1 gene:Zm00001d051532 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	AATCGAATCTTGTGAACACAAGAGCTCCATGTGGCCACCGGCCACGGTGTGGCAATGGTA GTTTCGTCACACTGACTCTGCTCCACCGCTCGCCGATGGTACTAGCATGGTGGGAGGTCT AGTTCTGTCCCAGGCGCAGACGCACCATACCGCCGCGCCAAGAACCGCCGCACCGGCGCC GGCACAGGCGTTGGAGAAGCGGCCGAGGGACCAGGCCCAGCCATGTGGCACAGCGGCGGC GGCCGTCTCGGTGCGGAGCTTGGACGAGGTCAGGAAGGCGCACGCGCGGCACATCAAGCT GGGCCTCGACCGCTCCCCACGGCACGCGCGGCCGCTGCTCGCGGCGTGTGCGCTCTCGGG CTGGCCGGGCGGCATGGAGCTCGCGGCGTCCATCTTCGAGTCGCTCGTCGAGCCGGAGGC CTTCGATTACAACACCCTGATGCGCGGCCACGTCGGTGGCGGCCGTGAACCGGCGGCCGC GCTGCGCATGTACGTTGACATGCTGGAGGCGGGCGTCCGGCCTGACAGCTACACGTTCCC GTTCGCACTCAAGGCGTGCGCGCAGCTCGCGGCCTTGCAAGAAGGGAGACAGTTGCAGGC GCACATCGTGAAGCTCGGGTTCCAGCACGACGAACACGTGCAGAACAGCCTGATCAGCTT CTACGGCAAGTGCGTCGAGCCGGCGATGGCTCGTCTGGCGTTTGACCGGGTGGAGGCGGA GGAGCGAACGGCGGCTTCCTGGAGCGCACTCCTCGCGGCGTACACGAAAGCCGGGCTGTG GGGCGAATGCCTCGAGTCGTTCGGCGCGATGGTGCTCGATGGGTGGCGTCCCGACGAGAG CTCCACGGTCAGCGCGCTCTCGGCGTGCGCGCACCTGGGTGCCTTCGACGTCGGGCGGAG TCTCCACTGCGCGTTGCTGAGGAACACCGCGAGGCTGAACACCATCATGCAGACGTCCCT GGTGGACATGTACGCCAAGTGCGGCAGCATCGAGAAGGCCGCGGCGGTGTTCGACGCGAT GGACGACAAGAACGCGTGGACGTACAGCGCCATGCTGTCCGGCTTGGCGCTGCACGGGGA CGGGCGGAAGGCCCTGCAGGTGTTCGACGCGATGGTCCGGGAGCGCCACGCGCCCGACGC AGCCACGTACGTCGGCGTGCTGAACGCCTGCAGCCGCGCCGGGCTGCTCGAGGACGGGCT GCGGTGCTTCGACCGCATGCGGCTGGAGCACAACGTCGCGCCCAACGCGCAGTACTACGG CTGCATGGTGGACCTGATGGCGCGCGCCGGAAGGCTGGACGACGCGCGCGCGCTCATCGG GAGCATGTCCACGGGGCCGACGGACACGGCCTGGCGAAGCCTGCTGAACGCCTGCCGGAT CCACGGCGATCTGGATCTCGCCGAGCGCGCCCTCCAGGAGCTGAGGCGCCTCGGCGCCGC GAACGCCGGCGACTACGTCATCGTCGCGGACATGCACGCCAGGGCCAAGGACTGGGCCGC TGCCGCCCAGCTCCGGACAGAGGCGGTGGACTGGGGCCTCGCGCAATCCCCCGGGGTCAG CGCCGTGGAGGTACGCGGCGAGCTGCACCGGTTCGTGTCGCAGGACAGGTCGCACCCGCG GACGAGCGACATCTACGAGATGCTCCACCAGATGGAGTGGCAGCTGCGGTTCGATGGCTA CAAACCTGACACGTCGGAGGTGGCGCTGGACGTGGGCGAAGAGGAGAAGCGGCGTGTGGT CGCCGCGCACAGCCAGAAGCTGGCCATGGCATTCGGCCTGCTCAGCACGGCGGAGGGGGC ACCGGTGAGGATCGTGACCAACCTCCGGATGAGCAAGGAATGCCACGCGTACAGCGCGCT GATCTCGGAAATTTTCGGCCGGGAGATCGTCATCAGGGACCGGAACCGCCTCCACCGGTT CCGGCGCGGCGTCTGCAGTTGCAGAGACTACTGGTAACGGTTTCGTTTTGTCAACAGTGG TCGATGGTGTAAATATCAACCGCAATTTCTGTCTTTGCTGTTGAGTCCTGATCGAAAAAA ATGTCTGAACGTTTGCTGACACTTCAAAGGCCGAGGTTGGTATGTTTGATGTCATTTGGG CTAAGCAAACGCAGGAATTTTACAAGAACGGTGTAGGAATTTCACGGGAATTAGTTCAAA AACACGTAAAAAATGTATGATTCGGATTAATTCTATTTGTTCCAAAGGAGGTCTAAGAAT TGAAGAC