Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d051507_T084
CDS Infomation

cds chromosome:B73_RefGen_v4:4:160690745:160711755:-1 gene:Zm00001d051507 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1
Sequence

ATGGCGTCAAAAGGTCCCCGGTCAAAGTTAGACCATGAGACAAGAGCTAGGCGTCAGAAG
GCTCTTGAAGCTCCAAGGGAGCCTCGACGACCAAAAGTTCACTGGGACCATGTCCTTGCT
GAGATGATGTGGCTGTCAAAGGAGTTTGATTCTGAGAGAAAATGGAAGTTGTCCATGGCC
AAAAAGATTGCTCAAAGAGCAAATAAGAGCATAGTTGACCAAGCAACAAAGGGCGAGAGA
AAACAGAAGGAGAAAGAACATAGAATGCGAAAAGTTGCCCTTAATATTTCAAAGGATGTG
AAGAAGTTCTGGATCAAAATAGAAAAGCTGGTTGTTTATAAGCACCAGCTGGAGCTTGAG
GAGAGAAAGAAGAAGGCACTTGATAAGCAACTTGATTTTCTTTTAGGTCAGACTGAAAGG
TATTCGACAATGTTGGCGGAAAATCTTGTGGATATGCCCTATCCCGAAAACCTAGAAAAC
AGGACTTCACAGATAAACCAACGATCCCATCAAGAGGAAGTACCAGAAAAGAACTTAAAT
GCAACCATTTCTGATGATTTTGATAATATGGAAGTCGATGATGATTATGAGAGCTCCTTG
GACGAAGAGCCAGAAGATGATGAGCACACAATTGATGAGGATGAAGCTCAGATCACTGAA
GCTGAGCGCAACGAAGAACTAGCTGCTTTAGAGGCAGAAGCTGATCTACCACTTGATGTT
ATTCTCAAGATGTACACAAAAACTAAAGATTCTTTGAAGCAGGCTAATGGGCGTGATCAT
GAACCTGCTCACTCTTCAAGTGAAGATGGCAATTCTTCTGAGGAAGTGGATGATGGCCAT
TCTTATGCTGAGTTTGTGAAGAAGAATCATGGTAAAAGTAACGGAAATATTTCTTCTATC
AATGACCAGGAGGACAAAGATTACATTGCTACTGAAGAAGTAAAGGATGATGAAGCAACT
TTGTCTGAAGAGGAAGAATTGGCAAAAAAAGAAGATCCTGATTATCTGGAAGAGGTTAAG
TTACTGCAGAAGGAGAGCGAGATACCACTAGAAGAACTTCTCGCGAGGTACCGAGAGGAT
GGCTGTGCAGATCATGAAACAGCGGAGTTGAAGAATTCACCCCATTTTGTTGAAGAGGTC
AATACTGACATGTCTTTGGATGATCAATCTGTGAGCATTTTGGAAGCGAAAAGTGATTTA
TTTGTGGATCACCAATCCAGGGATGTGCTGGAAACTGAGGACACGGCTCCACGATCAGAA
ATCGCATCAGAGCCTTGTGCTAAACAAAATTTTGATGAAGAGAATAATCTCACTGATGTT
AAGACAGTCAATGGAGATAAGAGTGATGATGTAAAGAGTGATGATGTAATTGCTGATGCT
GCAGCTGCTGCAAGATCAGCACAACCAACTGGCAACACCTTCTTGACTACAAAAGTGCGC
ACGAAATTCCCATTCCTTCTTAAGCATTCTCTTCGTGAATACCAGCATATAGGGCTGGAT
TGGTTAGTTGCTATGTATGAGAAGAGGCTTAATGGAATTCTAGCAGACGAAATGGGTTTA
GGCAAGACAATCATGACTATCTCCTTGCTTGCACACCTTGCGTGTGAGAAGGGGATATGG
GGTCCTCATCTTATTGTCGTGCCGACTAGTGTTATGCTAAATTGGGAGACTGAATTTCTT
AAGTGGTGTCCTGCTTTTAAAATACTGACTTATTTCGGAAGCGCAAAGGAGAGAAAGCAG
AAGCGTCAGGGCTGGATGAAACCAAATTTCTTCCATGTTTGCATCACAACATATAGGCTT
GTCATACAGGACTCTAAAGTGTTTAAGAGAAAGAAGTGGAAGTATCTTATTCTTGATGAG
GCTCATCTGATAAAGAACTGGAAATCACAACGTTGGCAGACTTTGCTCAACTTTAATTCA
AAGAGACGTATTCTTCTGACTGGAACTCCACTGCAAAATGACCTTATGGAACTTTGGTCC
CTCATGCATTTTCTGATGCCTCATGTGTTTCAGTCTCATCAAGAGTTCAAGGATTGGTTC
TGCAATCCAATTTCTGGGATGGTGGAAGGTCAAGATAAAGTAAACAAAGAAATTATAGAT
CGGTTGCACAATGTCCTTCGTCCATTTATACTGCGTCGACTGAAAAGAGATGTTGAGAAA
CAGTTACCAAAGAAGCAAGAGCATGTCATATATTGCCGACTTTCTAGAAGGCAAAGAAAC
TTGTATGAAGATTTTATTGCTAGCTCAGAGACTCAAGCAACACTGGCAAGTGGGAATTAT
TTTGGCATGATAAGCATCATTATGCAACTTAGAAAGGTCTGTAACCATCCAGATCTTTTT
GAAGGTCGGCCAATAATAAGCTCATTTGACATGGCTGGGATTAACATGCAGCTCAGCTAT
TCAGTCTGCATGCTCCTTGATAAGAGTCCATTTTCTCAGGTGGGACTGTCTGATATGAAT
TTAGTGTTTACGCAAAATGAATTTAGCATGAGTTCCTGGGAAGCTGATGAGGTCATTTCT
GCCTTTCCTTTGAGTACCACTTCCTGGAACCATGACCTTGATACTTTTTGCTCTAATAAG
GATCGTCAGGGAAGTAATTTGACAAACATTTTTGAAGATATTCAGAAAGCACTACAGGAG
GAGAGAATAAAGGAATCCAGAGAAAGGGCAGCTTCCATTGCATGGTGGAATAGAGTTAGA
TGCCAAAAGAGGCCTGTCTATGGCACAAACATGATACATGTTTTGACTGTAAAGCATCAT
GTATCAAATATTCTTGATAAGAGGAACAACCCTTTGTGC

Peptide Sequence

PEP ID

Zm00001d051507_P084
PEP Infomation

pep chromosome:B73_RefGen_v4:4:160690745:160711755:-1 gene:Zm00001d051507 transcript:Zm00001d051507_T084 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1
Sequence

MASKGPRSKLDHETRARRQKALEAPREPRRPKVHWDHVLAEMMWLSKEFDSERKWKLSMA
KKIAQRANKSIVDQATKGERKQKEKEHRMRKVALNISKDVKKFWIKIEKLVVYKHQLELE
ERKKKALDKQLDFLLGQTERYSTMLAENLVDMPYPENLENRTSQINQRSHQEEVPEKNLN
ATISDDFDNMEVDDDYESSLDEEPEDDEHTIDEDEAQITEAERNEELAALEAEADLPLDV
ILKMYTKTKDSLKQANGRDHEPAHSSSEDGNSSEEVDDGHSYAEFVKKNHGKSNGNISSI
NDQEDKDYIATEEVKDDEATLSEEEELAKKEDPDYLEEVKLLQKESEIPLEELLARYRED
GCADHETAELKNSPHFVEEVNTDMSLDDQSVSILEAKSDLFVDHQSRDVLETEDTAPRSE
IASEPCAKQNFDEENNLTDVKTVNGDKSDDVKSDDVIADAAAAARSAQPTGNTFLTTKVR
TKFPFLLKHSLREYQHIGLDWLVAMYEKRLNGILADEMGLGKTIMTISLLAHLACEKGIW
GPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKQKRQGWMKPNFFHVCITTYRL
VIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWS
LMHFLMPHVFQSHQEFKDWFCNPISGMVEGQDKVNKEIIDRLHNVLRPFILRRLKRDVEK
QLPKKQEHVIYCRLSRRQRNLYEDFIASSETQATLASGNYFGMISIIMQLRKVCNHPDLF
EGRPIISSFDMAGINMQLSYSVCMLLDKSPFSQVGLSDMNLVFTQNEFSMSSWEADEVIS
AFPLSTTSWNHDLDTFCSNKDRQGSNLTNIFEDIQKALQEERIKESRERAASIAWWNRVR
CQKRPVYGTNMIHVLTVKHHVSNILDKRNNPLC

Transcript Sequence

Transcript ID

Zm00001d051507_T084
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:160690745:160711755:-1 gene:Zm00001d051507 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1
Sequence

GCGACTCTGTCCCCCGAGGCCCCGGCGCTCGTCCGCCCGTCGCGTCGCTTCGATGCCCCC
CTCGCAGTCGCGACTCACCTCCTCCTCCGTGTTCCCCATTCATCCTAAAAGGCCTAAACC
CTAGCCTCCTTGCTCCCGCGCTCCGGCCGCTGGCGCCGGTGCAACCACGCGCCGCCGCCA
GTGCATCTCGTCCAGGGCTGCACGTCCACCTGTAGTGGGTTGTGCGGCCCCAACGCGAGT
TCGGCGCCGACCACCACCGAACCGAAGTGATCTGCCCGTCCCAACGCGCGGCAGCGCCGC
CGGACGGTGCCCGCCACTTCGGCAGTGCGTGCTGCCTCCGGTATAGCGGCTGCCAGATCC
CGCCGCGGGACCTGCAGTCAGTAATCACTAACAGTTTTTGCATTGTTGGTGTGCCAGTAC
CAGTTCGGTGCTCATGCTCTAAGATATGATATAGGATTGGAAAGATGGCGTCAAAAGGTC
CCCGGTCAAAGTTAGACCATGAGACAAGAGCTAGGCGTCAGAAGGCTCTTGAAGCTCCAA
GGGAGCCTCGACGACCAAAAGTTCACTGGGACCATGTCCTTGCTGAGATGATGTGGCTGT
CAAAGGAGTTTGATTCTGAGAGAAAATGGAAGTTGTCCATGGCCAAAAAGATTGCTCAAA
GAGCAAATAAGAGCATAGTTGACCAAGCAACAAAGGGCGAGAGAAAACAGAAGGAGAAAG
AACATAGAATGCGAAAAGTTGCCCTTAATATTTCAAAGGATGTGAAGAAGTTCTGGATCA
AAATAGAAAAGCTGGTTGTTTATAAGCACCAGCTGGAGCTTGAGGAGAGAAAGAAGAAGG
CACTTGATAAGCAACTTGATTTTCTTTTAGGTCAGACTGAAAGGTATTCGACAATGTTGG
CGGAAAATCTTGTGGATATGCCCTATCCCGAAAACCTAGAAAACAGGACTTCACAGATAA
ACCAACGATCCCATCAAGAGGAAGTACCAGAAAAGAACTTAAATGCAACCATTTCTGATG
ATTTTGATAATATGGAAGTCGATGATGATTATGAGAGCTCCTTGGACGAAGAGCCAGAAG
ATGATGAGCACACAATTGATGAGGATGAAGCTCAGATCACTGAAGCTGAGCGCAACGAAG
AACTAGCTGCTTTAGAGGCAGAAGCTGATCTACCACTTGATGTTATTCTCAAGATGTACA
CAAAAACTAAAGATTCTTTGAAGCAGGCTAATGGGCGTGATCATGAACCTGCTCACTCTT
CAAGTGAAGATGGCAATTCTTCTGAGGAAGTGGATGATGGCCATTCTTATGCTGAGTTTG
TGAAGAAGAATCATGGTAAAAGTAACGGAAATATTTCTTCTATCAATGACCAGGAGGACA
AAGATTACATTGCTACTGAAGAAGTAAAGGATGATGAAGCAACTTTGTCTGAAGAGGAAG
AATTGGCAAAAAAAGAAGATCCTGATTATCTGGAAGAGGTTAAGTTACTGCAGAAGGAGA
GCGAGATACCACTAGAAGAACTTCTCGCGAGGTACCGAGAGGATGGCTGTGCAGATCATG
AAACAGCGGAGTTGAAGAATTCACCCCATTTTGTTGAAGAGGTCAATACTGACATGTCTT
TGGATGATCAATCTGTGAGCATTTTGGAAGCGAAAAGTGATTTATTTGTGGATCACCAAT
CCAGGGATGTGCTGGAAACTGAGGACACGGCTCCACGATCAGAAATCGCATCAGAGCCTT
GTGCTAAACAAAATTTTGATGAAGAGAATAATCTCACTGATGTTAAGACAGTCAATGGAG
ATAAGAGTGATGATGTAAAGAGTGATGATGTAATTGCTGATGCTGCAGCTGCTGCAAGAT
CAGCACAACCAACTGGCAACACCTTCTTGACTACAAAAGTGCGCACGAAATTCCCATTCC
TTCTTAAGCATTCTCTTCGTGAATACCAGCATATAGGGCTGGATTGGTTAGTTGCTATGT
ATGAGAAGAGGCTTAATGGAATTCTAGCAGACGAAATGGGTTTAGGCAAGACAATCATGA
CTATCTCCTTGCTTGCACACCTTGCGTGTGAGAAGGGGATATGGGGTCCTCATCTTATTG
TCGTGCCGACTAGTGTTATGCTAAATTGGGAGACTGAATTTCTTAAGTGGTGTCCTGCTT
TTAAAATACTGACTTATTTCGGAAGCGCAAAGGAGAGAAAGCAGAAGCGTCAGGGCTGGA
TGAAACCAAATTTCTTCCATGTTTGCATCACAACATATAGGCTTGTCATACAGGACTCTA
AAGTGTTTAAGAGAAAGAAGTGGAAGTATCTTATTCTTGATGAGGCTCATCTGATAAAGA
ACTGGAAATCACAACGTTGGCAGACTTTGCTCAACTTTAATTCAAAGAGACGTATTCTTC
TGACTGGAACTCCACTGCAAAATGACCTTATGGAACTTTGGTCCCTCATGCATTTTCTGA
TGCCTCATGTGTTTCAGTCTCATCAAGAGTTCAAGGATTGGTTCTGCAATCCAATTTCTG
GGATGGTGGAAGGTCAAGATAAAGTAAACAAAGAAATTATAGATCGGTTGCACAATGTCC
TTCGTCCATTTATACTGCGTCGACTGAAAAGAGATGTTGAGAAACAGTTACCAAAGAAGC
AAGAGCATGTCATATATTGCCGACTTTCTAGAAGGCAAAGAAACTTGTATGAAGATTTTA
TTGCTAGCTCAGAGACTCAAGCAACACTGGCAAGTGGGAATTATTTTGGCATGATAAGCA
TCATTATGCAACTTAGAAAGGTCTGTAACCATCCAGATCTTTTTGAAGGTCGGCCAATAA
TAAGCTCATTTGACATGGCTGGGATTAACATGCAGCTCAGCTATTCAGTCTGCATGCTCC
TTGATAAGAGTCCATTTTCTCAGGTGGGACTGTCTGATATGAATTTAGTGTTTACGCAAA
ATGAATTTAGCATGAGTTCCTGGGAAGCTGATGAGGTCATTTCTGCCTTTCCTTTGAGTA
CCACTTCCTGGAACCATGACCTTGATACTTTTTGCTCTAATAAGGATCGTCAGGGAAGTA
ATTTGACAAACATTTTTGAAGATATTCAGAAAGCACTACAGGAGGAGAGAATAAAGGAAT
CCAGAGAAAGGGCAGCTTCCATTGCATGGTGGAATAGAGTTAGATGCCAAAAGAGGCCTG
TCTATGGCACAAACATGATACATGTTTTGACTGTAAAGCATCATGTATCAAATATTCTTG
ATAAGAGGAACAACCCTTTGTGC