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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d051465_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:4:159604335:159610352:1 gene:Zm00001d051465 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:zea agamous5 description:Agamous-like MADS-box protein AGL6
Sequence

ATGATGGAGCAAGTGGAAGAGCTTCGCAGAACGGAGCGTCACCTGGGAGAAATGAACAGG
CAACTCAAACACAAGCATGCCGCCTGCTGGCCAGCTCCCGGCGGCACCATCGTGGAGCAT
GACGGCGCCACCTATCAAGTGCATCCGCCTGCCCACTCAGTTGCTATGGACTGTGAACCC
ACTCTGCAAATCGGGTACCCTCATCACCAGTTTCCGCCCCCTGAGGCAGCCAATAATATC
CCAAGGAGCGCTGCCACAGGCGAGAACAACTTCATGCTGGGATGGGTTCTTTGA

Peptide Sequence

PEP ID

Zm00001d051465_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:4:159604335:159610352:1 gene:Zm00001d051465 transcript:Zm00001d051465_T003 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:zea agamous5 description:Agamous-like MADS-box protein AGL6
Sequence

MMEQVEELRRTERHLGEMNRQLKHKHAACWPAPGGTIVEHDGATYQVHPPAHSVAMDCEP
TLQIGYPHHQFPPPEAANNIPRSAATGENNFMLGWVL

Transcript Sequence

Transcript ID

Zm00001d051465_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:159604335:159610352:1 gene:Zm00001d051465 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:zea agamous5 description:Agamous-like MADS-box protein AGL6
Sequence

ACTTGTTGTTGCTCAACTGGGCCTCTGGCCACGCCTCCATCTTATTTCCAGATCTCTATC
TCTCTTGCTCGATTGCTCCGCTTGTTGCTTCTTTCTTTTTTCTCTTTCACGATTTCATGC
CCCTTTGCTCGGCAATACGAATTTAGATTTTTCATTACGTTTTCTCTCCATACAAGATCG
ATTTAGATCTGCTTGAGATTTTCAGGAGGGCCTCAGCACATTTTAAGTGGAAAGCTCAAA
GCATGATGAAAATCTTTCTGTTTCACGCACCCGTACTATTTCTGCTTTGGTATTTTTGTC
TTTGTTCTCATTTTATGCGTCTGCATCAGTACTATACTCAACCATGAGTGGTCGCTCTTT
CGCCTTTATTGATAGTATGTTGCTCTTGCCCGCACTTGTTGGTTCATGTATTTCACACTT
CTTGCTTTGTCTTCCTCTGCTGCTTAAAGATCCTAACGTACCTATTTGTTCACGTGACTG
GATCCAGACTAATAAAACTAAACGAAGTTATTTCTTTCTTATTTTTGTACTTCCAAAAAA
AATTCCAATTCTTTTGTAACTTGAATTATGAAAACGATACCTTTCGTTGAATATCGTATA
TTGTGTGTCTTTAATTTGTGTCATGGATGTATGGATCTATTTTATGATTGGAAGTATATA
GGGAGTATTGTTTTGTAGTAGGAAAATGGCCTAATCGCCTCGAATTTAAATCCTCTGAGT
TTATTTCTGGAAAAAATATTTTAGTTTAACGAGAAGAAAGTGCTAAATTATTCACCACCA
ATTTACTGCAGTTCTATTGCGTCATAAAACTAGTCTGCTTTCATCAAGTCATTTACCGTG
ACTTCGCAGAACCGTTTGTTCATGGTCTGGTGCTCTCCTAACTCCCACACTATATATTGC
CAATAAGGGGGTTAATGTTCAAAAAATAAATCAAAGTCCAACAGGGATCTGGAAATTTCT
GTCTCCATGTACCACTATATAATATGCAAGCATGCTTCATAAATTTATTATTTTTATAAT
ATTTGTTTTAAGGCAAAACCTAGATTGAATTAAATGACAGTTTATTACAGCCCCTTTGGC
AGGGCTCCAGTTTCTCTGAAAACAATTTCGACTCTCGCTCTTTGGCTTCTCTAAAGGAGC
CGGAGTTGTTTTATAATTCGTTTGAAAAAACAGTTTTTCTTATGTTTATTTCGAATGATG
TATTAGGGAAACGAAGGAGGAGCCGTTAGAAGCCACGTTTTTGGTGCTCTGGCTCCCAAC
ACAAAAATAGCTCAACCTCTTCGAGCGTAACTAAAACTTTAGAAAGGTATCAACATTGCT
GCTACAATGCTCAAGATTCCAACAATGGTGCACTCTCTGAATCTCAGAGCTGGTACCAGG
AAATATCAAAACTGAGGGCAAAATTCGAGGCCTTGCAGCGCACTCAGAGACACTTGCTTG
GGGAGGACCTTGGCCCACTGAGTGTGAAGGAATTGCAGCAGCTAGAGAAACAGCTAGAAT
GTGCTTTGTCACAGGCAAGACAGAGAAAGACGCAACTTATGATGGAGCAAGTGGAAGAGC
TTCGCAGAACGGAGCGTCACCTGGGAGAAATGAACAGGCAACTCAAACACAAGCATGCCG
CCTGCTGGCCAGCTCCCGGCGGCACCATCGTGGAGCATGACGGCGCCACCTATCAAGTGC
ATCCGCCTGCCCACTCAGTTGCTATGGACTGTGAACCCACTCTGCAAATCGGGTACCCTC
ATCACCAGTTTCCGCCCCCTGAGGCAGCCAATAATATCCCAAGGAGCGCTGCCACAGGCG
AGAACAACTTCATGCTGGGATGGGTTCTTTGAGTTCTTCTGTTAATCCATCCATCAGATG
GATCCATGTTGAAACCAATAAAAGGCATTCAGTGCTATATATATCATATGCATATCCGTG
CTCAAGTGCTTGATTTGCCACGACGTTGGATTGTATCGTTCTGTGTGTAATAGCTAATTT
AGAACGGCACATCTATTCTATGTGGTTGTGGTGTGGCACTTATACTGTTTATTCATTTGG
ACCATGAATCGGGGTAGTTT