Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d051416_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:157609029:157610057:-1 gene:Zm00001d051416 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heterodimeric geranylgeranyl pyrophosphate synthase small subunit chloroplastic
Sequence	ATGGCTCTCTCCTCCCTCTTCATCATCCTCCCCGTCCCCAAGGTCCCCTACTCCAACTAC TCCCGCCGCTTGCTCACTGCCCGGGCGTCCTCTGACGCTCCCGCTGCCTCTGCGTCATTC GACCTGCGCCGCTATTGGACCTCTCTGATCGCCGATGTGGAGTCCGAACTCGACGCCGCG ATGCCCATGCAGCCTCCGGAGAGCATCCACTCCGCCATGCGGTACGCGGTGCTCCCGGGC GCCGGCAAGGAGGGAGCCGCCAAACGGGCGCCCCCCGTGCTCTGCGTCGCCGCGTGCGAG CTCCTCGGCGCCCCGCGCGCGGCCGCACTCCCCGCCGCCGCCGCGCTGGAGATGCTCCAC GCGGCGTCGCTCGTGCACGACGACCTGCCCTGCTTCGACGCAGCCCCCACGCGACGCGGG CGCCCATCCACGCACGCGGCGTACGGCACCGACATGGCCGTCCTCGCGGGCGACGCTCTC TTCCCGCTCGCCTACACCCACGTCATCTCCCACACCCCGTGCCCGGACCCGGTCCCCCAC GCCGTCCTCATGCGCGTCCTCGCGGAGCTCGCTCGTGCGGTCGGATCCACCGGCATGGCG GCCGGTCAGTTCCTCGATCTGGCCGGCGCTACCGCCCTTGGCGAGGCCGAGGTCATGCAG GTCCTGACGAAGAAGTTCGGCGAGATGGCCGAGTGCTCCGCCGCCTGCGGCGCCATGCTC GGTGGGGCCCGGCCCGACGAGGAGGCCGCGTTGCGGCGCTACGGCCGCACCATCGGCGTC CTGTACGAGCTCGTGGACGACATCCGGAGCGCATCGGGAAACGGCAAGATGAGGAGCAAC GCCAGCGTCCTGCGTTCGCTGGGGATGGACCGCGCGCTCGGCATTGTGGAGGAGCTCAAG GCTCAGGCCAAGACAGAGGCTGACAGGTTCTCGGATAAGTACGGCGATCGGGTGCTGCCT TTATACAGCTTCGTGGACTACGCGGTGGAGAGAGGGTTTGAGCTCCAGGATGCAGCGGCA ACTCTGTAG

Peptide Sequence

PEP ID	Zm00001d051416_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:157609029:157610057:-1 gene:Zm00001d051416 transcript:Zm00001d051416_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heterodimeric geranylgeranyl pyrophosphate synthase small subunit chloroplastic
Sequence	MALSSLFIILPVPKVPYSNYSRRLLTARASSDAPAASASFDLRRYWTSLIADVESELDAA MPMQPPESIHSAMRYAVLPGAGKEGAAKRAPPVLCVAACELLGAPRAAALPAAAALEMLH AASLVHDDLPCFDAAPTRRGRPSTHAAYGTDMAVLAGDALFPLAYTHVISHTPCPDPVPH AVLMRVLAELARAVGSTGMAAGQFLDLAGATALGEAEVMQVLTKKFGEMAECSAACGAML GGARPDEEAALRRYGRTIGVLYELVDDIRSASGNGKMRSNASVLRSLGMDRALGIVEELK AQAKTEADRFSDKYGDRVLPLYSFVDYAVERGFELQDAAATL

Transcript Sequence

Transcript ID	Zm00001d051416_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:157609029:157610057:-1 gene:Zm00001d051416 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heterodimeric geranylgeranyl pyrophosphate synthase small subunit chloroplastic
Sequence	ATGGCTCTCTCCTCCCTCTTCATCATCCTCCCCGTCCCCAAGGTCCCCTACTCCAACTAC TCCCGCCGCTTGCTCACTGCCCGGGCGTCCTCTGACGCTCCCGCTGCCTCTGCGTCATTC GACCTGCGCCGCTATTGGACCTCTCTGATCGCCGATGTGGAGTCCGAACTCGACGCCGCG ATGCCCATGCAGCCTCCGGAGAGCATCCACTCCGCCATGCGGTACGCGGTGCTCCCGGGC GCCGGCAAGGAGGGAGCCGCCAAACGGGCGCCCCCCGTGCTCTGCGTCGCCGCGTGCGAG CTCCTCGGCGCCCCGCGCGCGGCCGCACTCCCCGCCGCCGCCGCGCTGGAGATGCTCCAC GCGGCGTCGCTCGTGCACGACGACCTGCCCTGCTTCGACGCAGCCCCCACGCGACGCGGG CGCCCATCCACGCACGCGGCGTACGGCACCGACATGGCCGTCCTCGCGGGCGACGCTCTC TTCCCGCTCGCCTACACCCACGTCATCTCCCACACCCCGTGCCCGGACCCGGTCCCCCAC GCCGTCCTCATGCGCGTCCTCGCGGAGCTCGCTCGTGCGGTCGGATCCACCGGCATGGCG GCCGGTCAGTTCCTCGATCTGGCCGGCGCTACCGCCCTTGGCGAGGCCGAGGTCATGCAG GTCCTGACGAAGAAGTTCGGCGAGATGGCCGAGTGCTCCGCCGCCTGCGGCGCCATGCTC GGTGGGGCCCGGCCCGACGAGGAGGCCGCGTTGCGGCGCTACGGCCGCACCATCGGCGTC CTGTACGAGCTCGTGGACGACATCCGGAGCGCATCGGGAAACGGCAAGATGAGGAGCAAC GCCAGCGTCCTGCGTTCGCTGGGGATGGACCGCGCGCTCGGCATTGTGGAGGAGCTCAAG GCTCAGGCCAAGACAGAGGCTGACAGGTTCTCGGATAAGTACGGCGATCGGGTGCTGCCT TTATACAGCTTCGTGGACTACGCGGTGGAGAGAGGGTTTGAGCTCCAGGATGCAGCGGCA ACTCTGTAG