Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d051415_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:157604148:157608446:1 gene:Zm00001d051415 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mechanosensitive ion channel protein 6
Sequence	ATGGACCGGGGTCGAAGCGAGAGCGGCCTGCGGTCGCACGGGTCCGGCAAGGTCTCCTCT CGGCCGGGGTCGGGGTCGCTTGCGTTCCCAGAGGAGCAACCGATACTAGCCGATCGCGAC GGCGGCGACCGCCGAGAGGTTGTCGTGAAGATCGATGGGAGCGGGAACGGGCACGCGCCG TTCTCCTTCCATGGAGCGGACGCAGGTGCTGACGGTGGCGGGGGGAAGGCGGAGAATGCG ACCTCCAGCACGAACTCCACAGCGACCACGCCGCAGGCCGAGAGCAGGTCGATGTCGAGC GAGACCAACTATCCTATGCCACCGGCCAATGTGTGCCGGCGGGAGGGGAGCTACGAGTTC TGGAACAATGACGGCGGCAGCGCCGAGGCGTTCAGCTTCCAGAACCGTCCGCCGCAGGGG CCGCACTCGTCGTCCCCTTCAATATCGCCGCCGCTGCCGCCAGAAGGGGGCGGCATGGAC CCACCCGCCCGGCTCAACGGCAGCTTCCACCGGAAGCAGGTGGCGTCCGACGGCGAGATG TCGCTCGACCTCGACCTGGAGATGGACGAGCTCGGGAGGACGGCCGCGCAGCTGCGCTCG CACCCATCCTTTTCCAGCTCGCTCGAAAGGGACGACCGCGTCTCGTTGCAGGAGCCACAA AAGCGGCACTCCGCGTCGTCCTGCTCATTCGATTCCGACACCGGCGACGGCCGAAAGCGC CGCGGCGACGACGGCGAGGTCGTTCGGTGCACGTCCTCCTCTAGTGCTGCGGGAGCGGGG CCGTTGCTGCGAGTCAACACGCGCTCCCGGCTCATGGACCCGCCGCCGCAGTCGCAGCGG GCGCCGGCACCTGCCGCGTCTTCTGTCGTCGACGAGGAGCGAAAATCTTCAGGCTTGCGG ACTCCTACAAAGTCGGGCCGCCTCTTCTCCAGGCTTATGTCCGGCAACAAGTCCGGTCCC ATTGCTGGCAAGTCAGGTCCCATGGACGACGAGGAGGACGATCCATTCGTGGACGAAGAC ATTCCCGATGACTTCAAGCGTGGGAAGCTGGACGCTTTGACGGTCTTGCAGTGGCTCGGC TTGTTCCTTATCATCGCGGCCTTGGCATGCAGTCTCAGCATAAAGATCTTGTCCACGAAG AAGGTGCTGGGTTTGCACCTCTGGAAGTGGGAGCTCCTCGTGTTCGTGCTCATCTGCGGC CGTCTCGTCTCCGGATGGGTCATCAGGATTGCCGTCTTCGGTGTCGAACGCAACTTCTTG CTGAGGAAGCGCGTGCTCTACTTTGTGTATGGAGTGCGCAGCGCCGTGCAGAACGCGCTC TGGCTCGGCCTGGTGCTCGCCTCTTGGCACTTCTTGTTTGACGAGAATGTCCAGCAGGAG ACGAACTCTCCAGTACTGCCCTATGTGACGAAGGTACTATTCTGCTTTCTTGTTGCCACG CTCATCCGCCTTGTCAAGACATTGCTGCTGAAGGTACTGGCCTCCTCCTTCCATGTCTCG ACGTACTTTGATCGGATTCAAGAGGCATTGTTCAATCAATACGTCATCCAGACACTCTCT GGGCCGCCACTAGTAGAAGAAAACCATGTGCTTGAGGAGGTTCATGAGCTCCAACGTGCA GGTGCAACTATACCAAAGGAGCTGCGTGATGCAGTACCAACCAAACATGTATCTGAGCAG AGGAACATTCAGTTATCAGGGGTCATGCCTGAGGGACAAGGTAGCAAGCAGCTGTCGAAA GAGAAAAGGGACGGGATCTCTATTGATGCACTTAACAAGCTCAACCAGCGAAATGTCTCA GCTTGGAACATGAAGAGGCTGATGAGGATTGTTCAATTTGGGACATTAACGACTATGGAT GAGCAGATACAACAGGCAAGAGGTAAGGGAGATGAATCAGCAACACAGATACGAAGTGAA TATGAGGCAAAGATAGCTGCCAAGAAGATCTTTAGCAATGTAGCAAAGCCAGGTTCCAAG TACATATACTTGTCGGACTTGATGAGATTCATGAGGCAGGAAGAGGCTGTTAAAGCAATG GATCTTTTTGAAGGGGCACAGGAGCACAGCAGGGTCAGCAAGAGGTCTCTCAAGAACTGG GTGGTGAATGCATTTAGAGAGCGCAAAGCTCTTGCCCTTACACTCAATGATACGAAAACT GCAGTAAACAAGCTGAACCAGATGGCTAACGTTATTGTGGGGATCATTGTGTTTGCTCTC TGGCTTCTTATCCTGGGAATAGCAACAGCAAATTTCTTTGTCTTTCTCACTTCACAGATT CTCCTGGCAGTTTTCGTGTTTGGGAATACGTTGAAGACGCTCTTTGAGGCAATTGTCTTC TTGTTCGTGATGCATCCCTTTGATGTCGGTGACCGCTGTGAAATTGAAGGTGTTCAGTTG GTTGTTGAGGAAATGAATCTCATGACAACGGTGTTTCTCCGATCTGATAACCTGAAGATA TATTATCCGAACAGTGTACTCGCAACAAAACCAATTATGAATTTCTACAGAAGTCCTGAT ATGGGCGAAGCAATTGACTTCTCCATTCATGTTGCAACTCCTGCCGAGAAACTGGCCCTG ATGAAGGAACGGATACTGCGCTACATTGACAACAAGAAGGAACATTGGTACCCGGGCGCG ATGGTTGTACTCCGGGACGTCGATGATACCAACAAACTGAAAGTGTCAATATGGCTGCGA CACACACTCAACTTCCAGGACATGGGCACGCGTTTCGTGAGGCGAGAGCTAGTGCTCCAG GAGATGATCAAAGTCCTGAAGGACCTCGAGGTTGAGTATCGGATGCTTCCACTTGATGTG AACGTTCGCAGTGCGCCTCCAATCCAGTCCACAAGGATGCCTACAACATGGAGTTATTCG TGA

Peptide Sequence

PEP ID	Zm00001d051415_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:157604148:157608446:1 gene:Zm00001d051415 transcript:Zm00001d051415_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mechanosensitive ion channel protein 6
Sequence	MDRGRSESGLRSHGSGKVSSRPGSGSLAFPEEQPILADRDGGDRREVVVKIDGSGNGHAP FSFHGADAGADGGGGKAENATSSTNSTATTPQAESRSMSSETNYPMPPANVCRREGSYEF WNNDGGSAEAFSFQNRPPQGPHSSSPSISPPLPPEGGGMDPPARLNGSFHRKQVASDGEM SLDLDLEMDELGRTAAQLRSHPSFSSSLERDDRVSLQEPQKRHSASSCSFDSDTGDGRKR RGDDGEVVRCTSSSSAAGAGPLLRVNTRSRLMDPPPQSQRAPAPAASSVVDEERKSSGLR TPTKSGRLFSRLMSGNKSGPIAGKSGPMDDEEDDPFVDEDIPDDFKRGKLDALTVLQWLG LFLIIAALACSLSIKILSTKKVLGLHLWKWELLVFVLICGRLVSGWVIRIAVFGVERNFL LRKRVLYFVYGVRSAVQNALWLGLVLASWHFLFDENVQQETNSPVLPYVTKVLFCFLVAT LIRLVKTLLLKVLASSFHVSTYFDRIQEALFNQYVIQTLSGPPLVEENHVLEEVHELQRA GATIPKELRDAVPTKHVSEQRNIQLSGVMPEGQGSKQLSKEKRDGISIDALNKLNQRNVS AWNMKRLMRIVQFGTLTTMDEQIQQARGKGDESATQIRSEYEAKIAAKKIFSNVAKPGSK YIYLSDLMRFMRQEEAVKAMDLFEGAQEHSRVSKRSLKNWVVNAFRERKALALTLNDTKT AVNKLNQMANVIVGIIVFALWLLILGIATANFFVFLTSQILLAVFVFGNTLKTLFEAIVF LFVMHPFDVGDRCEIEGVQLVVEEMNLMTTVFLRSDNLKIYYPNSVLATKPIMNFYRSPD MGEAIDFSIHVATPAEKLALMKERILRYIDNKKEHWYPGAMVVLRDVDDTNKLKVSIWLR HTLNFQDMGTRFVRRELVLQEMIKVLKDLEVEYRMLPLDVNVRSAPPIQSTRMPTTWSYS

Transcript Sequence

Transcript ID	Zm00001d051415_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:157604148:157608446:1 gene:Zm00001d051415 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mechanosensitive ion channel protein 6
Sequence	GTATTGTAGTTGTAGGCTTGTAGCCTTGTAGGCTTGCCGGCTGCGGCTGCTCAGCTCTAC GTTGTTCCGGAACATTCTGCTTCGCCGTCCCGCGACCGCGAGCACCACCGCTAGCATAAA CCGGCGACGCGCTATTAATCCAACCCAAAAGTCAGGCATCACTGCGAGCCAAGTATAGCA GGCGCGGAAAGGGGCCAAGGGGGCGAGTGGAGTTGCTGCGGTGCCCGTCTATCTTCGGGG AGCGTCTGGGGTTGCCGGCGGGGAGGCCATGGACCGGGGTCGAAGCGAGAGCGGCCTGCG GTCGCACGGGTCCGGCAAGGTCTCCTCTCGGCCGGGGTCGGGGTCGCTTGCGTTCCCAGA GGAGCAACCGATACTAGCCGATCGCGACGGCGGCGACCGCCGAGAGGTTGTCGTGAAGAT CGATGGGAGCGGGAACGGGCACGCGCCGTTCTCCTTCCATGGAGCGGACGCAGGTGCTGA CGGTGGCGGGGGGAAGGCGGAGAATGCGACCTCCAGCACGAACTCCACAGCGACCACGCC GCAGGCCGAGAGCAGGTCGATGTCGAGCGAGACCAACTATCCTATGCCACCGGCCAATGT GTGCCGGCGGGAGGGGAGCTACGAGTTCTGGAACAATGACGGCGGCAGCGCCGAGGCGTT CAGCTTCCAGAACCGTCCGCCGCAGGGGCCGCACTCGTCGTCCCCTTCAATATCGCCGCC GCTGCCGCCAGAAGGGGGCGGCATGGACCCACCCGCCCGGCTCAACGGCAGCTTCCACCG GAAGCAGGTGGCGTCCGACGGCGAGATGTCGCTCGACCTCGACCTGGAGATGGACGAGCT CGGGAGGACGGCCGCGCAGCTGCGCTCGCACCCATCCTTTTCCAGCTCGCTCGAAAGGGA CGACCGCGTCTCGTTGCAGGAGCCACAAAAGCGGCACTCCGCGTCGTCCTGCTCATTCGA TTCCGACACCGGCGACGGCCGAAAGCGCCGCGGCGACGACGGCGAGGTCGTTCGGTGCAC GTCCTCCTCTAGTGCTGCGGGAGCGGGGCCGTTGCTGCGAGTCAACACGCGCTCCCGGCT CATGGACCCGCCGCCGCAGTCGCAGCGGGCGCCGGCACCTGCCGCGTCTTCTGTCGTCGA CGAGGAGCGAAAATCTTCAGGCTTGCGGACTCCTACAAAGTCGGGCCGCCTCTTCTCCAG GCTTATGTCCGGCAACAAGTCCGGTCCCATTGCTGGCAAGTCAGGTCCCATGGACGACGA GGAGGACGATCCATTCGTGGACGAAGACATTCCCGATGACTTCAAGCGTGGGAAGCTGGA CGCTTTGACGGTCTTGCAGTGGCTCGGCTTGTTCCTTATCATCGCGGCCTTGGCATGCAG TCTCAGCATAAAGATCTTGTCCACGAAGAAGGTGCTGGGTTTGCACCTCTGGAAGTGGGA GCTCCTCGTGTTCGTGCTCATCTGCGGCCGTCTCGTCTCCGGATGGGTCATCAGGATTGC CGTCTTCGGTGTCGAACGCAACTTCTTGCTGAGGAAGCGCGTGCTCTACTTTGTGTATGG AGTGCGCAGCGCCGTGCAGAACGCGCTCTGGCTCGGCCTGGTGCTCGCCTCTTGGCACTT CTTGTTTGACGAGAATGTCCAGCAGGAGACGAACTCTCCAGTACTGCCCTATGTGACGAA GGTACTATTCTGCTTTCTTGTTGCCACGCTCATCCGCCTTGTCAAGACATTGCTGCTGAA GGTACTGGCCTCCTCCTTCCATGTCTCGACGTACTTTGATCGGATTCAAGAGGCATTGTT CAATCAATACGTCATCCAGACACTCTCTGGGCCGCCACTAGTAGAAGAAAACCATGTGCT TGAGGAGGTTCATGAGCTCCAACGTGCAGGTGCAACTATACCAAAGGAGCTGCGTGATGC AGTACCAACCAAACATGTATCTGAGCAGAGGAACATTCAGTTATCAGGGGTCATGCCTGA GGGACAAGGTAGCAAGCAGCTGTCGAAAGAGAAAAGGGACGGGATCTCTATTGATGCACT TAACAAGCTCAACCAGCGAAATGTCTCAGCTTGGAACATGAAGAGGCTGATGAGGATTGT TCAATTTGGGACATTAACGACTATGGATGAGCAGATACAACAGGCAAGAGGTAAGGGAGA TGAATCAGCAACACAGATACGAAGTGAATATGAGGCAAAGATAGCTGCCAAGAAGATCTT TAGCAATGTAGCAAAGCCAGGTTCCAAGTACATATACTTGTCGGACTTGATGAGATTCAT GAGGCAGGAAGAGGCTGTTAAAGCAATGGATCTTTTTGAAGGGGCACAGGAGCACAGCAG GGTCAGCAAGAGGTCTCTCAAGAACTGGGTGGTGAATGCATTTAGAGAGCGCAAAGCTCT TGCCCTTACACTCAATGATACGAAAACTGCAGTAAACAAGCTGAACCAGATGGCTAACGT TATTGTGGGGATCATTGTGTTTGCTCTCTGGCTTCTTATCCTGGGAATAGCAACAGCAAA TTTCTTTGTCTTTCTCACTTCACAGATTCTCCTGGCAGTTTTCGTGTTTGGGAATACGTT GAAGACGCTCTTTGAGGCAATTGTCTTCTTGTTCGTGATGCATCCCTTTGATGTCGGTGA CCGCTGTGAAATTGAAGGTGTTCAGTTGGTTGTTGAGGAAATGAATCTCATGACAACGGT GTTTCTCCGATCTGATAACCTGAAGATATATTATCCGAACAGTGTACTCGCAACAAAACC AATTATGAATTTCTACAGAAGTCCTGATATGGGCGAAGCAATTGACTTCTCCATTCATGT TGCAACTCCTGCCGAGAAACTGGCCCTGATGAAGGAACGGATACTGCGCTACATTGACAA CAAGAAGGAACATTGGTACCCGGGCGCGATGGTTGTACTCCGGGACGTCGATGATACCAA CAAACTGAAAGTGTCAATATGGCTGCGACACACACTCAACTTCCAGGACATGGGCACGCG TTTCGTGAGGCGAGAGCTAGTGCTCCAGGAGATGATCAAAGTCCTGAAGGACCTCGAGGT TGAGTATCGGATGCTTCCACTTGATGTGAACGTTCGCAGTGCGCCTCCAATCCAGTCCAC AAGGATGCCTACAACATGGAGTTATTCGTGAAGCCAGTGACCAGGAACCGGACCATTTGG CCGTGGCATTCCGGATGAGGACTTGCTACGTTCCTCCATGGATTTGGTGGGTTTAAGCTG CAAGATCTTGTTGGCAGCGCAAATGGCGTGATGGTGGTGATCTTGGTAGCAAATCGAGCT AGAGATTAGCATATTACTATATTAGCATGTAGAGAGCTGTTAGTTGTGCCTGCACTCGTC ACTTGTGCAGAATGGATGGGATGGAACGCATGCCGGATGCGACAGCGGCAACGAAGATGG TGGGCGGATGGCAATAATGTAGTGCTCTGTTGATCTGTTGTATACTTGTATCTGTGAGTT GTGACGAGAAACCTGTTGTATACGGAGGTCCTGAACTTGCAGAATTCAAATTGGCAATGT ATTACAGATTCTC