Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d051383_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:4:156517895:156521289:1 gene:Zm00001d051383 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vesicle-associated protein 1-3
Sequence

ATGAGTAACACGCTGCTTCGGGTCTGCCCGTCCGACCTGAAGATGCCATTCGAGGTCAAG
AAGCACAGTTCGGCATGTCTCGAGCTCGTCAACAGGACCGATCGGTGGGTGGCTTTCAAG
GTCAAGACGACGAACCCTAGGAAGTACTCGGTGCGGCCTGCCTCCGGCGTCGTGCAGCCC
AGGGGATCCTGCGGCATCACAATCACGATGCAAGCGCCCAAGGAGGTGCCCCCGGACTAC
CAGTGCAAGGACAAGTTTCTCGTTCAGAGCGTCGCGGCGGCGGAGGGGACGACGCACAAG
GGCATTGTCCCTGGCATGTTCAGCAAAGCGCCAGGTAAGTTGGTTGAGGAGTTCAAGTTG
AGGGTGGTCTATGTCCCTGCCAACCCTCCGTCACCAGTGCCCGAGGAAACAGAGGAAGAT
GACGGATCTCTTGATTCAGATGTGGACCATGAAGTGGGGACACCATCGACGTCCAACTGT
GCAGCAGGACAAGGGCATACATGTAGATCACAAGCTTCAGATGACGAGGGTGACTCTACA
TCCAAGTTAGGACTGGAAAGTAGATATGCAGAGGAAAACAAGATGGTTCAGAAAGACCTG
ATACAGGATGCCTCTATATCCGAGTTAGAACTGGAAAGTAGATATGCAGAGGAAAACAAG
AAGATCCAGAAAGAGCTGGATCTCCTCCGGAAGACACATGCATCTCCTGGGGACTTCTCG
GCGACGTCTGTGCTGCTTGTCTTCTTGTTATCTTCACTTGTTGGATACCTGATGTTCGGA
AGCAAAACTTAG

Peptide Sequence

PEP ID

Zm00001d051383_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:4:156517895:156521289:1 gene:Zm00001d051383 transcript:Zm00001d051383_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vesicle-associated protein 1-3
Sequence

MSNTLLRVCPSDLKMPFEVKKHSSACLELVNRTDRWVAFKVKTTNPRKYSVRPASGVVQP
RGSCGITITMQAPKEVPPDYQCKDKFLVQSVAAAEGTTHKGIVPGMFSKAPGKLVEEFKL
RVVYVPANPPSPVPEETEEDDGSLDSDVDHEVGTPSTSNCAAGQGHTCRSQASDDEGDST
SKLGLESRYAEENKMVQKDLIQDASISELELESRYAEENKKIQKELDLLRKTHASPGDFS
ATSVLLVFLLSSLVGYLMFGSKT

Transcript Sequence

Transcript ID

Zm00001d051383_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:156517895:156521289:1 gene:Zm00001d051383 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vesicle-associated protein 1-3
Sequence

AAACGGATCGAGCCCTGCGCTACGCTGCCAACCGTACTACACTCCAGAAAAACGTCGCCG
GGGCCCTCCCCCGTCTTGGGATATTTCATCAGTTTTCAGGTTCTTGGCTCTTGGGATCGG
ATCTTCCATATTCTTTGGTTCTCGAGACTCCAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GGAGGAAGCGGGGGTGATCGTTGTTTCTTGATCGCCGCCATGAGTAACACGCTGCTTCGG
GTCTGCCCGTCCGACCTGAAGATGCCATTCGAGGTCAAGAAGCACAGTTCGGCATGTCTC
GAGCTCGTCAACAGGACCGATCGGTGGGTGGCTTTCAAGGTCAAGACGACGAACCCTAGG
AAGTACTCGGTGCGGCCTGCCTCCGGCGTCGTGCAGCCCAGGGGATCCTGCGGCATCACA
ATCACGATGCAAGCGCCCAAGGAGGTGCCCCCGGACTACCAGTGCAAGGACAAGTTTCTC
GTTCAGAGCGTCGCGGCGGCGGAGGGGACGACGCACAAGGGCATTGTCCCTGGCATGTTC
AGCAAAGCGCCAGGTAAGTTGGTTGAGGAGTTCAAGTTGAGGGTGGTCTATGTCCCTGCC
AACCCTCCGTCACCAGTGCCCGAGGAAACAGAGGAAGATGACGGATCTCTTGATTCAGAT
GTGGACCATGAAGTGGGGACACCATCGACGTCCAACTGTGCAGCAGGACAAGGGCATACA
TGTAGATCACAAGCTTCAGATGACGAGGGTGACTCTACATCCAAGTTAGGACTGGAAAGT
AGATATGCAGAGGAAAACAAGATGGTTCAGAAAGACCTGATACAGGATGCCTCTATATCC
GAGTTAGAACTGGAAAGTAGATATGCAGAGGAAAACAAGAAGATCCAGAAAGAGCTGGAT
CTCCTCCGGAAGACACATGCATCTCCTGGGGACTTCTCGGCGACGTCTGTGCTGCTTGTC
TTCTTGTTATCTTCACTTGTTGGATACCTGATGTTCGGAAGCAAAACTTAGCAAGTTCTT
AGAAGCAAGATAATGACAGCACATCATTCTGCGGCTCCGGCACAGCTCTATCGTCTTTTG
TGTATTGCTCCTTTTAGTACAAAATATATATAGTTAAGTAGTCCACAATACATGACAGAT
ACTCCTCCCTTGCTAGTCCCGTATGAACAGATACTCCTCCCTTCTTGAGTAGGTGTTTTT
TTCTTTCTAAGGGCTAGTTTGGGAGCCACAAAACCGGAGTGGATTGAATTGTCTGAAATC
TCCTTCTTAATTAATTTTAAATAAAAAGTGAATTTTAACA