Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d051321_T011
CDS Infomation	cds chromosome:B73_RefGen_v4:4:154082193:154088581:1 gene:Zm00001d051321 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent zinc metalloprotease FTSH 7 chloroplastic
Sequence	ATGGGCTTCCTCCTGCTCCAGCTCGGCTTCGCCGTATTCGCGCTACGCATGCTTCGACCG GAGATCGCGTTGCCTGGCTCAGAGCCCCGCCCGCAGACCACGTACGTCAGTGTACCGTAC AGCGACTTCCTGGCGAGCATAGACAAGGACCAGGTGAAGAAGGTTGAGGTGGACGGGGTG CACGTCATGTTCCGACTCCGTCCAGAGGTTGAGTCCCAGGTCCGTGTGGAGCAGACACCA TCACAGCGCGGAACAGATGCTGTCGTCGATAATGCTGGAGTCTCGAGGAGAATTGTGTTC ACCACGACTCGTCCAGTGGACATAAAGACGCCATACGAGAAGATGGTGGAAAACATGGTT GAATTTGGGTCACCGGACAAGAGGTCTGGCGGCACGCTCAATTCTGCGCTGGTAGCTCTT ATTTATGTCGTATTGATTGCAGTAGTTTTGCAGCGTTTGCCAATAAGCTTTTCTCAGCAT TCAGCCGGTCAGTTGAGGAACAGGAAGAATTCTAATTCTGGTAGAGCAAAAGTTTCTGAA AGTACAGATATAGTTACATTTGCTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTT GAAGAAATTGTGGAGTTCTTAAGGAACCCAGAAAGATATGTTCGTCTTGGTGCTCGCCCT CCTCGTGGTGTCTTATTGGTGGGTCTTCCAGGGACTGGAAAGACACTTCTTGCAAAAGCC GTAGCAGGAGAAGCAGAAGTCCCGTTCATAAGTTGCTCTGCTAGTGAATTTGTTGAGCTA TATGTAGGCATGGGAGCAGCTCGAGTACGTGACCTATTTGCTAAGGCCAAAAAGGAATCA CCGTCGATTATTTTTATCGATGAGATTGATGCTGTTGCAAAAAGCCGTGATGGTCGATAT CGCATTGTCAGTAATGATGAACGTGAGCAGACACTAAACCAATTGCTCACGGAAATGGAT GGCTTCGACACCAATTCGGCTGTCATTGTACTAGGGGCAACAAATCGAGCTGATGTTTTG GATCCTGCCCTTAGGCGACCTGGGAGATTTGACCGTGTAGTTATGGTTGAAGCTCCTGAT AGGTTTGGAAGAGAATCAATTCTAAAAGTTCATGTGAGCAGAAGAGAGCTTCCACTGAGT AAAGATGTAGATCTAGCCGATATTGCTGCAATGACAACTGGTTTTACTGGAGCAGACCTT GCAAACTTGGTAAATGAAGCTGCTTTGTTGGCTGGGCGATTAAATAAAGAAATTGTGGAA AAGATTGACTTCATCCATGCGGTTGAGCGATCTATAGCTGGGATAGAGAAAAAGCATGCA AAATTGAAGGGTAATGAAAAGGCTGTCGTTGCACGGCATGAAGTAGGTCATGCACTCGTG GGAACTGCTGTAGCGAACCTTCTTCCTGGACAGCCACGTGTTGAGAAATTGAGTATATTG CCAAGGTCAGGAGGTGCATTAGGCTTTACATACACCCCTCCCACCACAGAGGATAGATAT TTACTCTTTGTTGATGAACTACGTGGCCGTTTAGTAACACTTCTGGGTGGGAGGGCAGCA GAGGAAGTTGTTTTAGCAGGACGGGTTTCCACTGGTGCACTTGATGACATAAGACGTGCT ACTGACATGGCCTACAAAGCTGTAGCAGAATACGGTCTTAATCAGCGCATCGGGCCAATA TCACTTGCTACACTGTCAAATGGTGGGTTAGATGACTCTGGTGGTTCTCCATGGGGAAGA GATCAGGGCCATCTAGTTGATCTCGTTCAGAGGGAAGTAAAAGCGCTTTTACAGACGGCA CTGGAAGTAGCTCTTTCAGTTATTCGTGCTAATCCTGCAGTTTTGGAAGGCCTCGGAGCA TATTTAGAAGAGAATGAAAAGGTTGAAGGCGAGGAACTTGAAGAGTGGCTAAAGTCAGTT GTTGCATCAAAAGAGTTGACCTCTTTTATCAGAGGACAGCAAGAGCAAGTTCTTCAGCTG GAAGCAGGCTCCTAG

Peptide Sequence

PEP ID	Zm00001d051321_P011
PEP Infomation	pep chromosome:B73_RefGen_v4:4:154082193:154088581:1 gene:Zm00001d051321 transcript:Zm00001d051321_T011 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent zinc metalloprotease FTSH 7 chloroplastic
Sequence	MGFLLLQLGFAVFALRMLRPEIALPGSEPRPQTTYVSVPYSDFLASIDKDQVKKVEVDGV HVMFRLRPEVESQVRVEQTPSQRGTDAVVDNAGVSRRIVFTTTRPVDIKTPYEKMVENMV EFGSPDKRSGGTLNSALVALIYVVLIAVVLQRLPISFSQHSAGQLRNRKNSNSGRAKVSE STDIVTFADVAGVDEAKEELEEIVEFLRNPERYVRLGARPPRGVLLVGLPGTGKTLLAKA VAGEAEVPFISCSASEFVELYVGMGAARVRDLFAKAKKESPSIIFIDEIDAVAKSRDGRY RIVSNDEREQTLNQLLTEMDGFDTNSAVIVLGATNRADVLDPALRRPGRFDRVVMVEAPD RFGRESILKVHVSRRELPLSKDVDLADIAAMTTGFTGADLANLVNEAALLAGRLNKEIVE KIDFIHAVERSIAGIEKKHAKLKGNEKAVVARHEVGHALVGTAVANLLPGQPRVEKLSIL PRSGGALGFTYTPPTTEDRYLLFVDELRGRLVTLLGGRAAEEVVLAGRVSTGALDDIRRA TDMAYKAVAEYGLNQRIGPISLATLSNGGLDDSGGSPWGRDQGHLVDLVQREVKALLQTA LEVALSVIRANPAVLEGLGAYLEENEKVEGEELEEWLKSVVASKELTSFIRGQQEQVLQL EAGS

Transcript Sequence

Transcript ID	Zm00001d051321_T011
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:154082193:154088581:1 gene:Zm00001d051321 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent zinc metalloprotease FTSH 7 chloroplastic
Sequence	GCCTCTTTCCTTCCTCATCTTCGTCTCTTTCCTCACCCCGACCCCCCCGCACCGACTCCT CCACGCGCACGCGCGCGGCGGCGGCGGCGGAGTCGGGAGAGGTCCCTGGTGCTGCTTCTC GCTCAACCCGTACGCTACTCCTTCCTCTCCGTATGGCTTCCGCCGCCGTGGAAACCCTCG TCTCGTTCCCAATCGCATCCCGTCCCCGCTCGCTCCTACGCCCCTTCCCGCGGCGACCTG CCGCCGCCGCCGCCGCCGGGGGATGCGCGCCTTCGATCCGGCGACGGCGCCTCTGGTAAC GGCGAGCCGTCGTCCTCGTCCGGGGACGGCGACCGCGACGCGGCTGCGGACTCGGGGGGC GACACCACCGGCACGAGCACCACGAGCGCCGCCCAGACGCCGCCGCCGCCCTCGTCGAAG AGGGGCGAAAACAAGTGGCGGCGGAGGCTGACTAAGGGAGGTGGCGTCGGGCGCTGGCTA TGGGAGCCCATAGTCCAGGGGCGGGAGATGGGCTTCCTCCTGCTCCAGCTCGGCTTCGCC GTATTCGCGCTACGCATGCTTCGACCGGAGATCGCGTTGCCTGGCTCAGAGCCCCGCCCG CAGACCACGTACGTCAGTGTACCGTACAGCGACTTCCTGGCGAGCATAGACAAGGACCAG GTGAAGAAGGTTGAGGTGGACGGGGTGCACGTCATGTTCCGACTCCGTCCAGAGGTTGAG TCCCAGGTCCGTGTGGAGCAGACACCATCACAGCGCGGAACAGATGCTGTCGTCGATAAT GCTGGAGTCTCGAGGAGAATTGTGTTCACCACGACTCGTCCAGTGGACATAAAGACGCCA TACGAGAAGATGGTGGAAAACATGGTTGAATTTGGGTCACCGGACAAGAGGTCTGGCGGC ACGCTCAATTCTGCGCTGGTAGCTCTTATTTATGTCGTATTGATTGCAGTAGTTTTGCAG CGTTTGCCAATAAGCTTTTCTCAGCATTCAGCCGGTCAGTTGAGGAACAGGAAGAATTCT AATTCTGGTAGAGCAAAAGTTTCTGAAAGTACAGATATAGTTACATTTGCTGATGTGGCT GGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTGGAGTTCTTAAGGAACCCAGAA AGATATGTTCGTCTTGGTGCTCGCCCTCCTCGTGGTGTCTTATTGGTGGGTCTTCCAGGG ACTGGAAAGACACTTCTTGCAAAAGCCGTAGCAGGAGAAGCAGAAGTCCCGTTCATAAGT TGCTCTGCTAGTGAATTTGTTGAGCTATATGTAGGCATGGGAGCAGCTCGAGTACGTGAC CTATTTGCTAAGGCCAAAAAGGAATCACCGTCGATTATTTTTATCGATGAGATTGATGCT GTTGCAAAAAGCCGTGATGGTCGATATCGCATTGTCAGTAATGATGAACGTGAGCAGACA CTAAACCAATTGCTCACGGAAATGGATGGCTTCGACACCAATTCGGCTGTCATTGTACTA GGGGCAACAAATCGAGCTGATGTTTTGGATCCTGCCCTTAGGCGACCTGGGAGATTTGAC CGTGTAGTTATGGTTGAAGCTCCTGATAGGTTTGGAAGAGAATCAATTCTAAAAGTTCAT GTGAGCAGAAGAGAGCTTCCACTGAGTAAAGATGTAGATCTAGCCGATATTGCTGCAATG ACAACTGGTTTTACTGGAGCAGACCTTGCAAACTTGGTAAATGAAGCTGCTTTGTTGGCT GGGCGATTAAATAAAGAAATTGTGGAAAAGATTGACTTCATCCATGCGGTTGAGCGATCT ATAGCTGGGATAGAGAAAAAGCATGCAAAATTGAAGGGTAATGAAAAGGCTGTCGTTGCA CGGCATGAAGTAGGTCATGCACTCGTGGGAACTGCTGTAGCGAACCTTCTTCCTGGACAG CCACGTGTTGAGAAATTGAGTATATTGCCAAGGTCAGGAGGTGCATTAGGCTTTACATAC ACCCCTCCCACCACAGAGGATAGATATTTACTCTTTGTTGATGAACTACGTGGCCGTTTA GTAACACTTCTGGGTGGGAGGGCAGCAGAGGAAGTTGTTTTAGCAGGACGGGTTTCCACT GGTGCACTTGATGACATAAGACGTGCTACTGACATGGCCTACAAAGCTGTAGCAGAATAC GGTCTTAATCAGCGCATCGGGCCAATATCACTTGCTACACTGTCAAATGGTGGGTTAGAT GACTCTGGTGGTTCTCCATGGGGAAGAGATCAGGGCCATCTAGTTGATCTCGTTCAGAGG GAAGTAAAAGCGCTTTTACAGACGGCACTGGAAGTAGCTCTTTCAGTTATTCGTGCTAAT CCTGCAGTTTTGGAAGGCCTCGGAGCATATTTAGAAGAGAATGAAAAGGTTGAAGGCGAG GAACTTGAAGAGTGGCTAAAGTCAGTTGTTGCATCAAAAGAGTTGACCTCTTTTATCAGA GGACAGCAAGAGCAAGTTCTTCAGCTGGAAGCAGGCTCCTAGCGTCAGGACTCTTAAAAT TAATTACTTACAGAAGTCTTCCAGCAATTAGAACATACAATGCGAGTTCCAAGGTATGCA ATGGAAACCTTGATACTGGGGACAGATCTGTGGCCATGTGGTGGATTGTATGACCTCTCC CACCCACTCATGCTAAGACAAACTTGGGTTGGGCGCCCACCCTTCGTTCGTTGAATCATG AGCTCGAGCCTTAGAGGAGAATTTTCAGAAAAGGAAATCTACATGCCCGAGTGACCATGT AAATATTTACCATTGCAGTTCGCGGACCCATGAGTACCAAAAAAAAGAGATGATTCATAT TGACCTGTAACATTGTAAGATCAACCTCAGGAATATTTGAAGCGGTTAGTTTTCACATGT TCATAGATCGGGTCGGTGTTACACATGTAAAAGATTCTTTTTTTGCCCTAGGTTCTTGTC CTCACCCTGTTAGAAGTTATTTTCCTCTTTACAATATGATCCTAGAGATGATCAATAGGA TAATTAATGCTTATACGGACTATGGTTCCTGTATTGATATACTCTTTCCAATATACTTCG GGCTTCAAAT