Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d051307_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:152668573:152674431:-1 gene:Zm00001d051307 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:autophagy13a description:Autophagy-related protein 13a
Sequence	ATGGCGAGCCTGTCGGACTCGGCGGGCGCAGGCGGCGGCCGCGCCGGCGCGGAGCTGATG GTGCCACAGTTCCTACTCAAGGCGCTGCACGCCATCCTCGCCGTGCGGTCGCCGCGCCCG CACGCGCCGCCGGCCCCGGCGGCGTCGGCGTCGGCGTTCCGGAGGCGTGACCGGTGGTTC CACCTGCCGATCCACGCGCCGCCGCCGCCGCCCGCGGCGGAGCACCTGCCGGACCCGTCC CCCGGGGAGCCGCTCGTGGTGGACGTGTACCTGGCCCCATCGGGCGGCGGGCCAGAGGAG GTGCTCGAGAGGTGGACCGTGGCGTGCGAGCCCTGGCCGTCGCCCGCCGCGGCCGCCGCC GTCGGGGAGGGGCTGGCGGTCAACAGGGCGTACAAGCGATGCATCACGCTGCTCAGGTCG CTCTACGCCGCGCTCCGCTTCCTCCCGGCGTACCGCGCCTTCCGCAGGCTCTGCGCGTCT GGCCAGGTGTACAACTACTGCATGGGCCACCGCGTCGGCTCCTTCGCCGCGCCCTTCTCC CGCGCCGAGGAGGCGGCCATGCGCACCAAACGCCTCGCCCCCGTCGAGACCCAGCTCGGC CGCCTCGTCGTCTCCGTCCAGTACCTCCCCAGCCTCGCCGCCTTCAACTTCGAGGTCACT TCCCTCGCGTCCGCCGCGATCATCACGGATTACGTCGGCAGCCCCGCGGCCGAGCCTATG CGTGCCTTCCCACCTTCGCTCACGGAGGCCACCGGCTCGCCCTTTCCGCAGCCCTCGCGG CGCCCCAACAGCTGGGCGTCGCCAGCGCCCTGGCCGCACACGCTCGGGCAACCGGCTAAA TTCTCGCCTCCGCCGGCCCATTACGCGTCGCCCACGCCCTCGCCACCGACGTTTGGCTAT CTGCACTCGCGGTTTAGCGGTGAGACTGCACCAATGACCATACCGCAGGCCGGCGGTGGC AGGGGCACTGTGCACCATCGGAACATGTCGGAACCCAGTAGAGCCTTCATGTTTCCTCCA CCTTCGCCAAAGAATGTGCGAGGGGAGGCAGGGATGCAGGAGTCACCGACAGAGATCAAT CGGTCCTTCAAGAGGGCGGATGGCATCCGCATGGGAGATCTCTATTCAAACTTGCCGTCT GGTTCTAAGATTAAGGACACTAAGGATGAATCTGGCAGGTTCTCTGGTGTCTTCTCTTCT AGTGGTTCACCAAGACATGGTTTCTCAAGAAGTTCAAGCAGATTGTCCATGCAGGATGAT ACTGATGATGCAGATTTTCCTTTTGCTGTGGATGATGTTTATCCAGATTCACGGCCAGGG AGTAGTAGTGGAAAGGACACAGGGGATCAGGCTGGTTCGTCATCCCATAAATCCCAAGAT GCTGCTGTTGGGTATCTCGTCCACCTGCTGAAATCTGCACGTCCACTGAGAGATTCTACC TACTCATCTCATACATCAAGGGGTGAATCTACCGAAGCAGGAAGCACCAGCTCTTTCTTG TCCCGCAGGACATCCGACGCACTGGAGGAGTTTGAATCTTTCAAGGAAACAAGGGAGAAC CTGCTAGCACGTAGTAGATCTCGGCTGCAAGATTCATTGGATAAGCCCTAG

Peptide Sequence

PEP ID	Zm00001d051307_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:152668573:152674431:-1 gene:Zm00001d051307 transcript:Zm00001d051307_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:autophagy13a description:Autophagy-related protein 13a
Sequence	MASLSDSAGAGGGRAGAELMVPQFLLKALHAILAVRSPRPHAPPAPAASASAFRRRDRWF HLPIHAPPPPPAAEHLPDPSPGEPLVVDVYLAPSGGGPEEVLERWTVACEPWPSPAAAAA VGEGLAVNRAYKRCITLLRSLYAALRFLPAYRAFRRLCASGQVYNYCMGHRVGSFAAPFS RAEEAAMRTKRLAPVETQLGRLVVSVQYLPSLAAFNFEVTSLASAAIITDYVGSPAAEPM RAFPPSLTEATGSPFPQPSRRPNSWASPAPWPHTLGQPAKFSPPPAHYASPTPSPPTFGY LHSRFSGETAPMTIPQAGGGRGTVHHRNMSEPSRAFMFPPPSPKNVRGEAGMQESPTEIN RSFKRADGIRMGDLYSNLPSGSKIKDTKDESGRFSGVFSSSGSPRHGFSRSSSRLSMQDD TDDADFPFAVDDVYPDSRPGSSSGKDTGDQAGSSSHKSQDAAVGYLVHLLKSARPLRDST YSSHTSRGESTEAGSTSSFLSRRTSDALEEFESFKETRENLLARSRSRLQDSLDKP

Transcript Sequence

Transcript ID	Zm00001d051307_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:152668573:152674431:-1 gene:Zm00001d051307 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:autophagy13a description:Autophagy-related protein 13a
Sequence	AAATCATTCGAAACGCCAAAATAAATAAATTCGTGCTTCAGTGACGGCACCAACAGCGAC CCGTTCGATACCCGGATTCAAAACCGGAGAGGAATCCATCCCCAATTCCCTTCCTCCCCC CACCCCGTCGCCCAACAGATCTGGTTCTCCTTCCCAAACAGTTCGAATTCGATCGCGCCA CGGTCCGTCACCCGCGCCGGCCAGATTTATGCAGCCATGCAGAGCGGCGGGGCCCGGTGC AGTTTGACTACTGCCGCTGCCGCTGCTACGGGGCTGAGGAGGGACCACTTTCGGGATCCG CAATGGCGAGCCTGTCGGACTCGGCGGGCGCAGGCGGCGGCCGCGCCGGCGCGGAGCTGA TGGTGCCACAGTTCCTACTCAAGGCGCTGCACGCCATCCTCGCCGTGCGGTCGCCGCGCC CGCACGCGCCGCCGGCCCCGGCGGCGTCGGCGTCGGCGTTCCGGAGGCGTGACCGGTGGT TCCACCTGCCGATCCACGCGCCGCCGCCGCCGCCCGCGGCGGAGCACCTGCCGGACCCGT CCCCCGGGGAGCCGCTCGTGGTGGACGTGTACCTGGCCCCATCGGGCGGCGGGCCAGAGG AGGTGCTCGAGAGGTGGACCGTGGCGTGCGAGCCCTGGCCGTCGCCCGCCGCGGCCGCCG CCGTCGGGGAGGGGCTGGCGGTCAACAGGGCGTACAAGCGATGCATCACGCTGCTCAGGT CGCTCTACGCCGCGCTCCGCTTCCTCCCGGCGTACCGCGCCTTCCGCAGGCTCTGCGCGT CTGGCCAGGTGTACAACTACTGCATGGGCCACCGCGTCGGCTCCTTCGCCGCGCCCTTCT CCCGCGCCGAGGAGGCGGCCATGCGCACCAAACGCCTCGCCCCCGTCGAGACCCAGCTCG GCCGCCTCGTCGTCTCCGTCCAGTACCTCCCCAGCCTCGCCGCCTTCAACTTCGAGGTCA CTTCCCTCGCGTCCGCCGCGATCATCACGGATTACGTCGGCAGCCCCGCGGCCGAGCCTA TGCGTGCCTTCCCACCTTCGCTCACGGAGGCCACCGGCTCGCCCTTTCCGCAGCCCTCGC GGCGCCCCAACAGCTGGGCGTCGCCAGCGCCCTGGCCGCACACGCTCGGGCAACCGGCTA AATTCTCGCCTCCGCCGGCCCATTACGCGTCGCCCACGCCCTCGCCACCGACGTTTGGCT ATCTGCACTCGCGGTTTAGCGGTGAGACTGCACCAATGACCATACCGCAGGCCGGCGGTG GCAGGGGCACTGTGCACCATCGGAACATGTCGGAACCCAGTAGAGCCTTCATGTTTCCTC CACCTTCGCCAAAGAATGTGCGAGGGGAGGCAGGGATGCAGGAGTCACCGACAGAGATCA ATCGGTCCTTCAAGAGGGCGGATGGCATCCGCATGGGAGATCTCTATTCAAACTTGCCGT CTGGTTCTAAGATTAAGGACACTAAGGATGAATCTGGCAGGTTCTCTGGTGTCTTCTCTT CTAGTGGTTCACCAAGACATGGTTTCTCAAGAAGTTCAAGCAGATTGTCCATGCAGGATG ATACTGATGATGCAGATTTTCCTTTTGCTGTGGATGATGTTTATCCAGATTCACGGCCAG GGAGTAGTAGTGGAAAGGACACAGGGGATCAGGCTGGTTCGTCATCCCATAAATCCCAAG ATGCTGCTGTTGGGTATCTCGTCCACCTGCTGAAATCTGCACGTCCACTGAGAGATTCTA CCTACTCATCTCATACATCAAGGGGTGAATCTACCGAAGCAGGAAGCACCAGCTCTTTCT TGTCCCGCAGGACATCCGACGCACTGGAGGAGTTTGAATCTTTCAAGGAAACAAGGGAGA ACCTGCTAGCACGTAGTAGATCTCGGCTGCAAGATTCATTGGATAAGCCCTAGTGTTGAT GCAGTCTGTGGTTCGATTCCTCAAAAGGTGAAGGGTCCAAACTGTAGAGTAAAGATCATA TGGCGAGCCTGGGTAAACTCTTTATTTCAGACTAGTCCGTGTGTAAATAGCTAATTAACT GGCGCTTGATTCCGAAAGAGAATACACAGGTCGCCGTTGATTCTATTGTTGGAAACTTGT CATTCTTAAACTCAAAGCAGGAATATCGTGTGCC