Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d051288_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:4:151822045:151825605:-1 gene:Zm00001d051288 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vesicle-associated protein 1-1
Sequence

ATGAGCACCGAGTCCGGGGAGCTGCTCGGGATCGACCCCGTCGAGCTCCGGTTCCCATTC
GAATTAAATAAGCAGATCTCCTGCACGCTGCAGCTGACGAACAAGACAGACAAGCAGGTC
GCGTTCAAGGTGAAGACGACAAGCCCGAAAAAGTACTGCGTTCGCCCAAACAACGGCATG
GTGGCGCCCCGGTCCAAGGCTGACGTTGTTGTTACGATGCAAGCGCAGCGGGACGTGCCA
CCGGACATGCAATGCAAGGACAAGTTCCTTGTGCAGAGCGCCACTGTCGCCAAGGAGGTC
GTGCCAAAGGAGGTCACTGGAGACATGTTTACCAAAGATTCAGGCAATGTAGTGGAAGAA
GTGAAGTTGAAGGTAGTTTATGTAGCACCATCGTCCTCTCAAAGCGAAAGATTTGAGGAT
GGTAATCTCGGCAGTTTGAGTTATCAAGAGGAAACAAAGGAACCTAAAGAATCAGAAAAA
ATAATCACTGAGCCATTTGCTTTGATTTCGAAACTGATGGAGGAGAAGAATTCTGCTATT
GAACTGAACAACAAGGTTCGACAAGAATTGGATTTTCTAAGGCGAGACATCAGCAGGCGG
CATGGTGGTTTCTCATTAGTTTTAGTACTGGTGGTTGCTATTCTGGGAATACTGCTAGGG
TTCCTCATGAAGAGATGA

Peptide Sequence

PEP ID

Zm00001d051288_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:4:151822045:151825605:-1 gene:Zm00001d051288 transcript:Zm00001d051288_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vesicle-associated protein 1-1
Sequence

MSTESGELLGIDPVELRFPFELNKQISCTLQLTNKTDKQVAFKVKTTSPKKYCVRPNNGM
VAPRSKADVVVTMQAQRDVPPDMQCKDKFLVQSATVAKEVVPKEVTGDMFTKDSGNVVEE
VKLKVVYVAPSSSQSERFEDGNLGSLSYQEETKEPKESEKIITEPFALISKLMEEKNSAI
ELNNKVRQELDFLRRDISRRHGGFSLVLVLVVAILGILLGFLMKR

Transcript Sequence

Transcript ID

Zm00001d051288_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:151822045:151825605:-1 gene:Zm00001d051288 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vesicle-associated protein 1-1
Sequence

CAAGTGAAGTCCTACGTGATGCGGACGCTGCAACCAACCGGCTCCCTGCGTCCTGCTCTG
CAGCTGCTGACCCCTTCTCCCGCCTCCGAAGGAAAACGGGCGGGCAACCTTCTCGTCCCT
TCCAAAATCCCGAGTTTCCCCCCGATTTCGACCCTCCGTTTTCCCCCCGCTTCCTTCTCT
GCTCCACCGCCTCAGGAATATAGATAGTCGGAGAAAAAAAAAACTGAGAGAGAAAGAGAG
AGGAGGAGGAGGCAGGGGAGTGGAGGGGAGGGGAAGCATCGCAATTCCGAACCCCCACCT
CGCCGCTCCCACCACCGCGGCCGGGTTGCGTCCGTTTCGATTGCCCAGGATGAGCACCGA
GTCCGGGGAGCTGCTCGGGATCGACCCCGTCGAGCTCCGGTTCCCATTCGAATTAAATAA
GCAGATCTCCTGCACGCTGCAGCTGACGAACAAGACAGACAAGCAGGTCGCGTTCAAGGT
GAAGACGACAAGCCCGAAAAAGTACTGCGTTCGCCCAAACAACGGCATGGTGGCGCCCCG
GTCCAAGGCTGACGTTGTTGTTACGATGCAAGCGCAGCGGGACGTGCCACCGGACATGCA
ATGCAAGGACAAGTTCCTTGTGCAGAGCGCCACTGTCGCCAAGGAGGTCGTGCCAAAGGA
GGTCACTGGAGACATGTTTACCAAAGATTCAGGCAATGTAGTGGAAGAAGTGAAGTTGAA
GGTAGTTTATGTAGCACCATCGTCCTCTCAAAGCGAAAGATTTGAGGATGGTAATCTCGG
CAGTTTGAGTTATCAAGAGGAAACAAAGGAACCTAAAGAATCAGAAAAAATAATCACTGA
GCCATTTGCTTTGATTTCGAAACTGATGGAGGAGAAGAATTCTGCTATTGAACTGAACAA
CAAGGTTCGACAAGAATTGGATTTTCTAAGGCGAGACATCAGCAGGCGGCATGGTGGTTT
CTCATTAGTTTTAGTACTGGTGGTTGCTATTCTGGGAATACTGCTAGGGTTCCTCATGAA
GAGATGAGTGTATGTAATGATTTATCTTGTTTGGCCTTTTCTGAACTAAACAAAATTGTA
TGTGCTCTGTGTGCTTGCTGTTGTACAACTCAGTGATCTGTTAATCATAGTATCTGAGGC
CTATTGTAATTTTCTGATTCATATTATAAACTTTAG