Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d051242_T015
CDS Infomation	cds chromosome:B73_RefGen_v4:4:150058935:150063598:1 gene:Zm00001d051242 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA polymerase II C-terminal domain phosphatase-like 1
Sequence	ATGCACACCGTGGCCGTCGGCGCCCGATGCCTCGTCATGGAGTCCAGGCCGCCCGTTGTC GCCGACGTTGTGCCGCCTCTCGTCGTCATGCACACCGCTTGCCTCAGGGAGAACAAGACT GCGGTTGTTCCACTTGGAGATGAAGAGTTGCATTTAGTTGCGATGACATCCAGAAGAAAC TTGACAAATCATGCATGTTTCTGGGGCTATAAATTGCCATTTGGTTTGTATAATTCTTGC TTGACCATGTTAAATCTTCGGTGCCTGGGTATTGTATTTGACCTTGATGAGACATTGATT GTCGCCAATACATCACGGTCTTTTGAGGACAGAATTGACGCACTTCAAAGAAAGCTGAGT AATGAGACTGATCCACAACGTAGGAATGGTATGCTATCAGAGATCAAGAGGTACCAGGAT GATAAGTCCATCCTAAAGCAATATATAGAAGGTGATCAGGTCTATGATGATGGAAAAGTG TATAAAGCACAACCTGAGATTGTTCCACCATTGTCTGATAACCAGCAACCAATGACACGT CCAGTTATAAGATTACAAGATAAAAACATTATCCTGACAAGAATAAATCCTCTGATTAGG GATACCAGTGTGCTTGTATGTTTAAGGCCAGCCTGGGAGGATCTTCGCAGCTACTTAATT GCCAGAGGTCGCAAGCGTTTTGAGGTCTATGTGTGTACGATGGCTGAAAGAGACTATGCT TTAGAAATGTGGAGATTGCTTGATCCAGATTCAAGATTGATTAATTCTGTTCAACTCCAT GATCGGATGGTGTGTGTAAAATCTGGTTTAAAAAAGTCCTTGCTAAATGTCTTCCATGAT GGTTCTTGCCATCCTGGTATGGCATTAGTAATTGATGATCGCCTGAAAGTTTGGGATGAG AAGGATCAATTACGAGTTCATGTGGTTCCTGCATTTACTCCATATTATGCTCCTCAGGCG GAGGCAAATTGTTCTATCCCAGTTCTGTGTGTAGCCAGAAACGTTGCATGCAATGTTAGG GGTGGTTTCTTCAAAGACTTTGATGAAGGCCTCTTACCAAGGATTAGCAATGTTCACTAT GAGGATGAAGTAAATGAGATATCTGCGCCAGATGTTGGCAATTATTTGATAACAGATGAT GAAAATGTCGCATTAGTGAATGGGAATAGAGATTCATTGCCTTTTGATGGTATGGCAGAT GCAGAGGTTGAGCGGAGAATGAAGGAAGCCAATGCTCAATCATTCCATCAAACAGCGGGA GACTTTGTCATGCCAGTAGCCCCTGCCCAGAATTTCGTTTCGACTTCAGTTGCATCATTA GCCCCACCTCTTGGCATGATGCCATCTCCATTTAGCCAGCCAGTTGCTCCACCAGGTTTT TCAGATTCACTGCAAGGTTCTCCAGCTAGAGAAGAGGGTGAAGTTCCAGAGTCTGAGTTG GATCCGGACACAAGGAGAAGGCTTCTTATATTACAGCATGGCCAAGACACAAGAGATCCT ACATCTCCACTACCAGCAATACCACCCGTCCAAGTTCCAGTTCCTCCAGTGCAACCCCAT GGGAATTGGTTTCCCACAGAGGATGGGATAAACCAAAGTAACCTGAATAGAGGCTCAGCA GGATTCACTGTAGAATCTGATTCTATTGTCTATGAGAAAAAGCAACCACCTCATCCTTCA TTCTTTCATGGTGGGGATAGTCCTATGCCGTCTGATAGATTTGGCTATCAGAACCAGAGG TTTCCCTCTCAGCTACCACACGAGGATCACCCCATGATGCAGAACCATGCACCTCCAAAA TACAGATCCTTTTCTGGTATGTTTATCATTTTTATTTCTGCCTTAGTTTTATTGTTCACC TTGGGGCCACTTTCCATGCGTTCCCTTGCCATGTGTTGCCACTCATATTCTAGGTGCAGT CACAACCCCATTACAAATGCTTTGGTTATGATTAGAGACAAGCTAAATAAGATTTAA

Peptide Sequence

PEP ID	Zm00001d051242_P015
PEP Infomation	pep chromosome:B73_RefGen_v4:4:150058935:150063598:1 gene:Zm00001d051242 transcript:Zm00001d051242_T015 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA polymerase II C-terminal domain phosphatase-like 1
Sequence	MHTVAVGARCLVMESRPPVVADVVPPLVVMHTACLRENKTAVVPLGDEELHLVAMTSRRN LTNHACFWGYKLPFGLYNSCLTMLNLRCLGIVFDLDETLIVANTSRSFEDRIDALQRKLS NETDPQRRNGMLSEIKRYQDDKSILKQYIEGDQVYDDGKVYKAQPEIVPPLSDNQQPMTR PVIRLQDKNIILTRINPLIRDTSVLVCLRPAWEDLRSYLIARGRKRFEVYVCTMAERDYA LEMWRLLDPDSRLINSVQLHDRMVCVKSGLKKSLLNVFHDGSCHPGMALVIDDRLKVWDE KDQLRVHVVPAFTPYYAPQAEANCSIPVLCVARNVACNVRGGFFKDFDEGLLPRISNVHY EDEVNEISAPDVGNYLITDDENVALVNGNRDSLPFDGMADAEVERRMKEANAQSFHQTAG DFVMPVAPAQNFVSTSVASLAPPLGMMPSPFSQPVAPPGFSDSLQGSPAREEGEVPESEL DPDTRRRLLILQHGQDTRDPTSPLPAIPPVQVPVPPVQPHGNWFPTEDGINQSNLNRGSA GFTVESDSIVYEKKQPPHPSFFHGGDSPMPSDRFGYQNQRFPSQLPHEDHPMMQNHAPPK YRSFSGMFIIFISALVLLFTLGPLSMRSLAMCCHSYSRCSHNPITNALVMIRDKLNKI

Transcript Sequence

Transcript ID	Zm00001d051242_T015
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:150058935:150063598:1 gene:Zm00001d051242 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA polymerase II C-terminal domain phosphatase-like 1
Sequence	ATGCACACCGTGGCCGTCGGCGCCCGATGCCTCGTCATGGAGTCCAGGCCGCCCGTTGTC GCCGACGTTGTGCCGCCTCTCGTCGTCATGCACACCGCTTGCCTCAGGGAGAACAAGACT GCGGTTGTTCCACTTGGAGATGAAGAGTTGCATTTAGTTGCGATGACATCCAGAAGAAAC TTGACAAATCATGCATGTTTCTGGGGCTATAAATTGCCATTTGGTTTGTATAATTCTTGC TTGACCATGTTAAATCTTCGGTGCCTGGGTATTGTATTTGACCTTGATGAGACATTGATT GTCGCCAATACATCACGGTCTTTTGAGGACAGAATTGACGCACTTCAAAGAAAGCTGAGT AATGAGACTGATCCACAACGTAGGAATGGTATGCTATCAGAGATCAAGAGGTACCAGGAT GATAAGTCCATCCTAAAGCAATATATAGAAGGTGATCAGGTCTATGATGATGGAAAAGTG TATAAAGCACAACCTGAGATTGTTCCACCATTGTCTGATAACCAGCAACCAATGACACGT CCAGTTATAAGATTACAAGATAAAAACATTATCCTGACAAGAATAAATCCTCTGATTAGG GATACCAGTGTGCTTGTATGTTTAAGGCCAGCCTGGGAGGATCTTCGCAGCTACTTAATT GCCAGAGGTCGCAAGCGTTTTGAGGTCTATGTGTGTACGATGGCTGAAAGAGACTATGCT TTAGAAATGTGGAGATTGCTTGATCCAGATTCAAGATTGATTAATTCTGTTCAACTCCAT GATCGGATGGTGTGTGTAAAATCTGGTTTAAAAAAGTCCTTGCTAAATGTCTTCCATGAT GGTTCTTGCCATCCTGGTATGGCATTAGTAATTGATGATCGCCTGAAAGTTTGGGATGAG AAGGATCAATTACGAGTTCATGTGGTTCCTGCATTTACTCCATATTATGCTCCTCAGGCG GAGGCAAATTGTTCTATCCCAGTTCTGTGTGTAGCCAGAAACGTTGCATGCAATGTTAGG GGTGGTTTCTTCAAAGACTTTGATGAAGGCCTCTTACCAAGGATTAGCAATGTTCACTAT GAGGATGAAGTAAATGAGATATCTGCGCCAGATGTTGGCAATTATTTGATAACAGATGAT GAAAATGTCGCATTAGTGAATGGGAATAGAGATTCATTGCCTTTTGATGGTATGGCAGAT GCAGAGGTTGAGCGGAGAATGAAGGAAGCCAATGCTCAATCATTCCATCAAACAGCGGGA GACTTTGTCATGCCAGTAGCCCCTGCCCAGAATTTCGTTTCGACTTCAGTTGCATCATTA GCCCCACCTCTTGGCATGATGCCATCTCCATTTAGCCAGCCAGTTGCTCCACCAGGTTTT TCAGATTCACTGCAAGGTTCTCCAGCTAGAGAAGAGGGTGAAGTTCCAGAGTCTGAGTTG GATCCGGACACAAGGAGAAGGCTTCTTATATTACAGCATGGCCAAGACACAAGAGATCCT ACATCTCCACTACCAGCAATACCACCCGTCCAAGTTCCAGTTCCTCCAGTGCAACCCCAT GGGAATTGGTTTCCCACAGAGGATGGGATAAACCAAAGTAACCTGAATAGAGGCTCAGCA GGATTCACTGTAGAATCTGATTCTATTGTCTATGAGAAAAAGCAACCACCTCATCCTTCA TTCTTTCATGGTGGGGATAGTCCTATGCCGTCTGATAGATTTGGCTATCAGAACCAGAGG TTTCCCTCTCAGCTACCACACGAGGATCACCCCATGATGCAGAACCATGCACCTCCAAAA TACAGATCCTTTTCTGGTATGTTTATCATTTTTATTTCTGCCTTAGTTTTATTGTTCACC TTGGGGCCACTTTCCATGCGTTCCCTTGCCATGTGTTGCCACTCATATTCTAGGTGCAGT CACAACCCCATTACAAATGCTTTGGTTATGATTAGAGACAAGCTAAATAAGATTTAATTT ATTCCAAATTAGATAGAGAGAAGTTAGGTATAAGTTGGTCAGTAGTTGTTTGGTTTGTT