Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d051234_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:149421262:149424901:-1 gene:Zm00001d051234 gene_biotype:protein_coding transcript_biotype:protein_coding description:hydroxyproline-rich glycoprotein family protein
Sequence	ATGCAGAGCCCTTATTCTTGGTTGGGCCACGGCCTCAACACCCAGCCGCCGCCGCCCGGC AGTTCCGTCTCCCTTCTTCGCCTTCTCAGTCAAGCTAAAACCTCGCTCGCCTCGTCCAGT CAGACATGGCATGAAACCCTAGGGCGCCCGCCTCCCCTCCGCAATTTGCCATTGCGCTCC GCGATGCAGGCATCCGCGCGCCTCTCCTACTCCGTGGCCTCCAGGAAAGTGATCGCGGGT GTCTCTATCGCGCCCCCACGGTCGTGCTATCGGACCTCCCGAGGGAAGGCGCATGCGGCG CCGCTGCCTGCGCAGGAGCCGCCACCGAAGGGGCTGAAGAGGATTACAAAGCAGGAGCGG AGGGTTCGAATAGTGGAATTTGTTGAGAATTATAGGGCTTCAAACGAAGGCAAGTTTCCT ACTGTAAAAAATATCTGTCAGCAAATTGGAGGTGGTTACTATGCAGTGCGTGAGTTACTT CAAGAAATGAAATATAATCATGCAAAATTACCACTGGGTAATGCTAAGGCAGCTCCACTT CAAACAACAGTTGAAGTCACTGAACACCCCATGCCTAAGGATGAAGCTAGAGTGGTTGAA AGTCAAGGAATACTAGAAGTTTCTGAGCACTCCATGGCCAAGGATGATGCTGAAGTGGCT CAACCTCAAGGAACAGCTGAAGTTTTTGAGCACTTCTTATCTAAAGATGAAGGTAAGGTG GCTCAGTGTCAAGGAACGTTTCACTTTCCTGAGCACTCAAGACCTAAGGATGACAGTGGA AAGACTGCTCGACATGATATGGACACTTCAGAAACCTGTAAGACTGCAGATGCCCCAGCT TTATCTGATCTAACAGAGAATGAGGGAATTTTATCTGACCAAACAGAGAGTGAGGACAAA CCAGATCCTGGAAATCAGCAAAGAGAAATAGAAGCTAACAAATTTGATTTGAAGAATTTC GAAAAAAATCTGAATGCAAATGATTCAAACGCATCAGATCAAAGTGGAAGTGATACGGTG AATGAGGCAAAGACACATGCCAGGGGAGACAACCCAAAGCTTGAGGAATCCGCGAACACG GGTCTTTTGGGCAGCCTGAGATCTTTTGCTTATGGCATCAGAAACTTCTGGAAAAATATG TAA

Peptide Sequence

PEP ID	Zm00001d051234_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:149421262:149424901:-1 gene:Zm00001d051234 transcript:Zm00001d051234_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:hydroxyproline-rich glycoprotein family protein
Sequence	MQSPYSWLGHGLNTQPPPPGSSVSLLRLLSQAKTSLASSSQTWHETLGRPPPLRNLPLRS AMQASARLSYSVASRKVIAGVSIAPPRSCYRTSRGKAHAAPLPAQEPPPKGLKRITKQER RVRIVEFVENYRASNEGKFPTVKNICQQIGGGYYAVRELLQEMKYNHAKLPLGNAKAAPL QTTVEVTEHPMPKDEARVVESQGILEVSEHSMAKDDAEVAQPQGTAEVFEHFLSKDEGKV AQCQGTFHFPEHSRPKDDSGKTARHDMDTSETCKTADAPALSDLTENEGILSDQTESEDK PDPGNQQREIEANKFDLKNFEKNLNANDSNASDQSGSDTVNEAKTHARGDNPKLEESANT GLLGSLRSFAYGIRNFWKNM

Transcript Sequence

Transcript ID	Zm00001d051234_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:149421262:149424901:-1 gene:Zm00001d051234 gene_biotype:protein_coding transcript_biotype:protein_coding description:hydroxyproline-rich glycoprotein family protein
Sequence	GAAGTCGACTGCTTAACTCAATGGGCCGTGCATCTTCGGTAATCTTTGTTTTTGGGGGGA ATGCAGAGCCCTTATTCTTGGTTGGGCCACGGCCTCAACACCCAGCCGCCGCCGCCCGGC AGTTCCGTCTCCCTTCTTCGCCTTCTCAGTCAAGCTAAAACCTCGCTCGCCTCGTCCAGT CAGACATGGCATGAAACCCTAGGGCGCCCGCCTCCCCTCCGCAATTTGCCATTGCGCTCC GCGATGCAGGCATCCGCGCGCCTCTCCTACTCCGTGGCCTCCAGGAAAGTGATCGCGGGT GTCTCTATCGCGCCCCCACGGTCGTGCTATCGGACCTCCCGAGGGAAGGCGCATGCGGCG CCGCTGCCTGCGCAGGAGCCGCCACCGAAGGGGCTGAAGAGGATTACAAAGCAGGAGCGG AGGGTTCGAATAGTGGAATTTGTTGAGAATTATAGGGCTTCAAACGAAGGCAAGTTTCCT ACTGTAAAAAATATCTGTCAGCAAATTGGAGGTGGTTACTATGCAGTGCGTGAGTTACTT CAAGAAATGAAATATAATCATGCAAAATTACCACTGGGTAATGCTAAGGCAGCTCCACTT CAAACAACAGTTGAAGTCACTGAACACCCCATGCCTAAGGATGAAGCTAGAGTGGTTGAA AGTCAAGGAATACTAGAAGTTTCTGAGCACTCCATGGCCAAGGATGATGCTGAAGTGGCT CAACCTCAAGGAACAGCTGAAGTTTTTGAGCACTTCTTATCTAAAGATGAAGGTAAGGTG GCTCAGTGTCAAGGAACGTTTCACTTTCCTGAGCACTCAAGACCTAAGGATGACAGTGGA AAGACTGCTCGACATGATATGGACACTTCAGAAACCTGTAAGACTGCAGATGCCCCAGCT TTATCTGATCTAACAGAGAATGAGGGAATTTTATCTGACCAAACAGAGAGTGAGGACAAA CCAGATCCTGGAAATCAGCAAAGAGAAATAGAAGCTAACAAATTTGATTTGAAGAATTTC GAAAAAAATCTGAATGCAAATGATTCAAACGCATCAGATCAAAGTGGAAGTGATACGGTG AATGAGGCAAAGACACATGCCAGGGGAGACAACCCAAAGCTTGAGGAATCCGCGAACACG GGTCTTTTGGGCAGCCTGAGATCTTTTGCTTATGGCATCAGAAACTTCTGGAAAAATATG TAAATCTGTTGTTTTTTTGCCGTGAGTCACCTAAAATTGAAAAGGCTACAGAATCGAGAA CTTGCCTCTTTGTCACGGGCTTTTGGTTGCATAGGATCGGAGAGGAGAGGGCTTTTGGTT GGAGAGGATTGATGGTTTGTTTGGGAGCAAGGGGAGAGCCTCTCCAATTCACTTGCTCCC AAACAAAACAAGCCATGAGACAATCCCTTGCTATTACTAGTAAGAGATTATGTCTCTAAA TTCCCTTCAATCCTTATGCAATAAAAGCCCCAAGCGTTTGTGATACTGGATCAATTTGTA AAGTTCTTTTTGTGTCACACCAAATGGTCATGTTCCGCTATGACGTTTCGATAAAGCTAG ATAGGAGTATTATTAGTACTGCCCCTGTTGTGGCCCAAGTTCACATGGTATTTAAGTGTT GGTGGTATCTAACTGTGTTTGTCAATTGTTGTGCACACATTGAAGGCCCTATTTAGAAGT AAAATATTTTTTATAGTTTTTAGGAAATATTACAGTTTATTATAGAAATACAAGAGTATT TTATATTATAAGGTGTTTGGTTGTATTTGTAAAAAACTATTTTTTAAATCATAGTATT