Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d051103_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:4:142662758:142671086:1 gene:Zm00001d051103 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic translation initiation factor 3 subunit E
Sequence

ATGATAATATTGGCATCTGTTATATCATCTACTGTTTCAAATGTTTTACTTGGAGCCAGA
CCAGCTTTTATAGTGCCAGCCTATGAGCTAAAATCTGCTGCCGGATTGACCTTTTTGGTT
GGAATGGCTGCTACACTAGCTTCAGTCTGTTCAGTCCCATTGACTTCAGTACTGCTTCTC
TTTGAGCTGACAAAGGATTACAGGATTTTGCTTCCTCTCATGATCGGTCTTGACCAGATT
GAAGCTCTGTATCAGTATGCCCAATTTCAGTTTGAGTGTGGTAACTACTCAGGGGCTGCT
GATTACCTTTACCAGTATGGTGCTTTGTGCACAAACAGTGAGCGAAATGTGAGTGCCCTC
TGGGGAAAGCTAGCAGCAGAAATCCTAATGCAGAACTGGGACCTAGCTTTGGAGGAACTC
AACCGCTTGAAGGAAATAATTGATTCAAAGCTCCAGAATAGGATATGGCTGATGCATTGG
GCTCTGTTCATCTTCTTTAACCATATCAGGTACTTGAATGCTATACAGACAAATGCACAC
CATCTTATTAGGCCGATCAAGTTCATTATCTTGAATACACCAAAGTGCAACTTTGCATTC
TCTTATAACCTCTTCCAAGTTGAACTCACCATGTAG

Peptide Sequence

PEP ID

Zm00001d051103_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:4:142662758:142671086:1 gene:Zm00001d051103 transcript:Zm00001d051103_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic translation initiation factor 3 subunit E
Sequence

MIILASVISSTVSNVLLGARPAFIVPAYELKSAAGLTFLVGMAATLASVCSVPLTSVLLL
FELTKDYRILLPLMIGLDQIEALYQYAQFQFECGNYSGAADYLYQYGALCTNSERNVSAL
WGKLAAEILMQNWDLALEELNRLKEIIDSKLQNRIWLMHWALFIFFNHIRYLNAIQTNAH
HLIRPIKFIILNTPKCNFAFSYNLFQVELTM

Transcript Sequence

Transcript ID

Zm00001d051103_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:142662758:142671086:1 gene:Zm00001d051103 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic translation initiation factor 3 subunit E
Sequence

GGCCCATCTCCCCAGCCGCCGTCCCTGCACTATCCTCCCTCAGGCCGCCGCCGCCCCTGG
TAGCCGTCGCCTCTCCTTGCTCTGCTCCTCTCTCTCCCAAGCGGCTCTCCCTCTATCTCC
TCGTTTCTCTCCCCTCCTCTTCTACAGCCGCTGCCAGGCAACCGACCGCCGAGCAGCGCA
GCCACCCGAGCCCCACGCCCGCCGCGCCAGGAACCAGCGCCCCTGCTCTCGCCAGGACGC
CAGGAATTGCTCTTTCTATAGCAAGTTTATGAGTTCAGTTTATATTCCATTGAATATTTG
TTGCAGTGAAGAGAAATGAGAGAAAGCCTTCGGTTGTAGCCTTCAGTTTATATTCCATTG
AATATTTGTTGCATCCGACTCATCTCTGTTTCGATTCCATCCGGTTTGGCTCATTTTTTA
ATCGAGTGTGTTGTAGTTTTGTACCCTAATGTCGTGGGAGTGCTACCGAAGTACTGATAG
CATCACTTTAATTTCATTAGCTCCGTCCTGGCAATCACTTTGGGAAGGTGGTCAGTGGAA
TAACTTTGCTTAAAAAGCTTGAAGCAGTTGGTAGTGAAACTGGAAATCCTTCTTATCAAG
TGAAAATTGTAGACTGTGGTGAAGTTTCCAACACAAATTCTCAGGATCCGCTAAAGGGAG
ATAAAGTAAGCTCAAAGACAGATAACAGCAGTTCAGACAGTGAAAAGGGTGGCCATCGTA
CCAAGCGTTCCTTGACGAAAGGCTTCAATGCAGCAGTTGCTGGGTGCTTCTTTGCCATTG
AAACTGTATTAAGACCTCTTAAAGCAGAAAATTCACCTCCATTTACGACTGCAATGATAA
TATTGGCATCTGTTATATCATCTACTGTTTCAAATGTTTTACTTGGAGCCAGACCAGCTT
TTATAGTGCCAGCCTATGAGCTAAAATCTGCTGCCGGATTGACCTTTTTGGTTGGAATGG
CTGCTACACTAGCTTCAGTCTGTTCAGTCCCATTGACTTCAGTACTGCTTCTCTTTGAGC
TGACAAAGGATTACAGGATTTTGCTTCCTCTCATGATCGGTCTTGACCAGATTGAAGCTC
TGTATCAGTATGCCCAATTTCAGTTTGAGTGTGGTAACTACTCAGGGGCTGCTGATTACC
TTTACCAGTATGGTGCTTTGTGCACAAACAGTGAGCGAAATGTGAGTGCCCTCTGGGGAA
AGCTAGCAGCAGAAATCCTAATGCAGAACTGGGACCTAGCTTTGGAGGAACTCAACCGCT
TGAAGGAAATAATTGATTCAAAGCTCCAGAATAGGATATGGCTGATGCATTGGGCTCTGT
TCATCTTCTTTAACCATATCAGGTACTTGAATGCTATACAGACAAATGCACACCATCTTA
TTAGGCCGATCAAGTTCATTATCTTGAATACACCAAAGTGCAACTTTGCATTCTCTTATA
ACCTCTTCCAAGTTGAACTCACCATGTAG