Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d051033_T006
CDS Infomation

cds chromosome:B73_RefGen_v4:4:137842391:137846386:-1 gene:Zm00001d051033 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:autophagy101 description:Autophagy-related protein 101
Sequence

ATGAACTGCGAGACCTGTCAGCTGAAAGAACTGGAGCTGGAACTGACGGAGATCAGGGAT
GTTCTGCGCTGTATTTTGCACACCATATTCTTCCATAGAACCCTCAGCCTGGTTCGCCCC
AAAGATGTTGACTGTGATTTCCTCGATATTACTTATGTACAATGTGGTCTACCGGAACTA
GAAAAGGAAGTTGACGAAAAGATAGACCAGTTCAGTGCATGGGTGGAGAAACACCCAAAC
CGCAGAAGCCAGATCTGCCTCTCCTTTTTCGACGAGAAACACAGACACCCTGGTTGGTTT
GTCAACAAAACAGAGCGCATCTATTGGGAGCAATGGTTCATCAATTTGCAAGTCATGTTC
CCCAAAAGATACAGCAAGTCAAACAGCTCCAAAGGGCTGACAAACATCCAAGCAAATGCC
GTGGAGGAGACCAGCACAAGGCGTGCTGCATTGGAGGCGTCGATTAACGAAGTGCTGTTC
CAGATCATAAAGTTCGCCAACGAGAAAAAGGACCACATTCCTGCTATCCCTGACAGGATT
TTCAATCACGAGATCATGATCCCAAGGTGA

Peptide Sequence

PEP ID

Zm00001d051033_P006
PEP Infomation

pep chromosome:B73_RefGen_v4:4:137842391:137846386:-1 gene:Zm00001d051033 transcript:Zm00001d051033_T006 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:autophagy101 description:Autophagy-related protein 101
Sequence

MNCETCQLKELELELTEIRDVLRCILHTIFFHRTLSLVRPKDVDCDFLDITYVQCGLPEL
EKEVDEKIDQFSAWVEKHPNRRSQICLSFFDEKHRHPGWFVNKTERIYWEQWFINLQVMF
PKRYSKSNSSKGLTNIQANAVEETSTRRAALEASINEVLFQIIKFANEKKDHIPAIPDRI
FNHEIMIPR

Transcript Sequence

Transcript ID

Zm00001d051033_T006
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:137842391:137846386:-1 gene:Zm00001d051033 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:autophagy101 description:Autophagy-related protein 101
Sequence

TCCATAATATTTTTCTAAAACCGCATATTCGTCTCTTCGATACTATTTTTCTAAGATCGG
ATATTTTAATGGTACAGATCTAATTATCCCAAGCACGCTTCCTCGACTTCCTATCTCGAC
TCTCCCAAGTCACAACCCTCGACCTCCCCCCTACTCCAACTACTGGAAGCGCCGATCCAT
CAGGTTCTGATCGATTCTTCTGCCCCGATCCGCAGCGGCAAGCGGAGATGAACTGCGAGA
CCTGTCAGCTGAAAGAACTGGAGCTGGAACTGACGGAGATCAGGGATGTTCTGCGCTGTA
TTTTGCACACCATATTCTTCCATAGAACCCTCAGCCTGGTTCGCCCCAAAGATGTTGACT
GTGATTTCCTCGATATTACTTATGTACAATGTGGTCTACCGGAACTAGAAAAGGAAGTTG
ACGAAAAGATAGACCAGTTCAGTGCATGGGTGGAGAAACACCCAAACCGCAGAAGCCAGA
TCTGCCTCTCCTTTTTCGACGAGAAACACAGACACCCTGGTTGGTTTGTCAACAAAACAG
AGCGCATCTATTGGGAGCAATGGTTCATCAATTTGCAAGTCATGTTCCCCAAAAGATACA
GCAAGTCAAACAGCTCCAAAGGGCTGACAAACATCCAAGCAAATGCCGTGGAGGAGACCA
GCACAAGGCGTGCTGCATTGGAGGCGTCGATTAACGAAGTGCTGTTCCAGATCATAAAGT
TCGCCAACGAGAAAAAGGACCACATTCCTGCTATCCCTGACAGGATTTTCAATCACGAGA
TCATGATCCCAAGGTGACCCCTTTTCCTTGGACGTGTTGACAGCTCGGATTCTGTATTTG
GATGGAACACGGACGTCATTCGCAGAGTTCTGAATAGCGGGCACCCATACTCGCTTTAAC
TGAAGACGACATCTCAGTGGGCGCCCGTATTCAGTTTATTAGCGTGCTGCCGCCCTGTTT
GGAAGACGGCTCTGTTAACCATCGTGGTGAACCATATAATATGCCTAAGGAAAAACCTAG
TTCTGTGTACATCACCCTGCTCATCTGGCATGTACATACTGTGTTGGGATCTTGCTCATC
GGTCAAACATTCTTAAGTTCGATTAAGTTTATAAATAACAATATTATGATT