Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d051001_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:4:136187554:136190530:1 gene:Zm00001d051001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:glyceraldehyde-3-phosphate dehydrogenase3 description:Glyceraldehyde-3-phosphate dehydrogenase 3%2C cytosolic

Sequence

ATGACCTACATGTTCAAGTATGACACTGTGCACGGACAGTGGAAGCACCATGAGGTCAAG
GTGAAGGACTCCAAGACCCTTCTCTTTGGTGAGAAGGAGGTTGCTGTGTTTGGCTGCAGG
AACCCTGAGGAGATCCCATGGGGTTCGGTTGGCGCTGAATATGTTGTTGAGTCTACTGGT
GTTTTCACTGACCAGGAGAAGGCTGCAGCTCACTTGAAGGGTGGTGCCAAGAAGGTTGTC
ATTTCTGCTCCTAGCAAGGATGCCCCCATGTTCGTTGTTGGTGTCAACGAGAAGGAGTAC
AAGTCTGACATCAACATTGTCTCTAATGCTAGCTGCACAACCAACTGCCTTGCTCCGCTT
GCTAAGGTCATCAATGACAAGTTCGGTATTGTTGAGGGTCTGATGACCACTGTTCATGCC
ATCACTGCTACCCAGAAGACTGTTGATGGGCCCTCATCTAAGGACTGGAGGGGTGGAAGG
GCTGCTAGTTTCAACATCATTCCCAGCAGCACTGGAGCTGCTAAGGCTGTTGGCAAAGTG
CTTCCTGTCCTCAATGGAAAATTGACTGGAATGTCTTTCCGTGTCCCAACTGTCGATGTT
TCTGTTGTTGATCTGACTGTTAGGCTTGAGAAGTCTGCCACCTATGATGAGATCAAGGCT
GCGGTCAAGGCCGAGGCAGAGGGTAGCCTCAAGGGCATTCTGGGTTATGTCGAGGAGGAC
CTTGTTTCCACCGATTTCCAGGGTGACAGCAGGTCTAGCATCTTTGATGCGAAGGCTGGC
ATTGCCTTGAACGGCAACTTTGTGAAGCTTGTGTCCTGGTACGACAACGAGTGGGGATAC
AGCACCCGAGTGGTCGACCTGATCCGCCACATGAACAGCACCAAGTAA

Peptide Sequence

PEP ID

Zm00001d051001_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:4:136187554:136190530:1 gene:Zm00001d051001 transcript:Zm00001d051001_T004 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:glyceraldehyde-3-phosphate dehydrogenase3 description:Glyceraldehyde-3-phosphate dehydrogenase 3%2C cytosolic

Sequence

MTYMFKYDTVHGQWKHHEVKVKDSKTLLFGEKEVAVFGCRNPEEIPWGSVGAEYVVESTG
VFTDQEKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEKEYKSDINIVSNASCTTNCLAPL
AKVINDKFGIVEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKV
LPVLNGKLTGMSFRVPTVDVSVVDLTVRLEKSATYDEIKAAVKAEAEGSLKGILGYVEED
LVSTDFQGDSRSSIFDAKAGIALNGNFVKLVSWYDNEWGYSTRVVDLIRHMNSTK

Transcript Sequence

Transcript ID

Zm00001d051001_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:136187554:136190530:1 gene:Zm00001d051001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:glyceraldehyde-3-phosphate dehydrogenase3 description:Glyceraldehyde-3-phosphate dehydrogenase 3%2C cytosolic

Sequence

TTGGTTGCTTGTGTTTGTGCTCTGGTATACGCAGCCAAGATCAAGATCGGGATCAATGGG
TTTGGCAGGATCGGAAGGCTGGTGGCCAGGGTGGCCCTGCAGAGCGACGACGTCGAGCTC
GTCGCCGTGAACGACCCCTTCATCAGCACCGATTACATGACCTACATGTTCAAGTATGAC
ACTGTGCACGGACAGTGGAAGCACCATGAGGTCAAGGTGAAGGACTCCAAGACCCTTCTC
TTTGGTGAGAAGGAGGTTGCTGTGTTTGGCTGCAGGAACCCTGAGGAGATCCCATGGGGT
TCGGTTGGCGCTGAATATGTTGTTGAGTCTACTGGTGTTTTCACTGACCAGGAGAAGGCT
GCAGCTCACTTGAAGGGTGGTGCCAAGAAGGTTGTCATTTCTGCTCCTAGCAAGGATGCC
CCCATGTTCGTTGTTGGTGTCAACGAGAAGGAGTACAAGTCTGACATCAACATTGTCTCT
AATGCTAGCTGCACAACCAACTGCCTTGCTCCGCTTGCTAAGGTCATCAATGACAAGTTC
GGTATTGTTGAGGGTCTGATGACCACTGTTCATGCCATCACTGCTACCCAGAAGACTGTT
GATGGGCCCTCATCTAAGGACTGGAGGGGTGGAAGGGCTGCTAGTTTCAACATCATTCCC
AGCAGCACTGGAGCTGCTAAGGCTGTTGGCAAAGTGCTTCCTGTCCTCAATGGAAAATTG
ACTGGAATGTCTTTCCGTGTCCCAACTGTCGATGTTTCTGTTGTTGATCTGACTGTTAGG
CTTGAGAAGTCTGCCACCTATGATGAGATCAAGGCTGCGGTCAAGGCCGAGGCAGAGGGT
AGCCTCAAGGGCATTCTGGGTTATGTCGAGGAGGACCTTGTTTCCACCGATTTCCAGGGT
GACAGCAGGTCTAGCATCTTTGATGCGAAGGCTGGCATTGCCTTGAACGGCAACTTTGTG
AAGCTTGTGTCCTGGTACGACAACGAGTGGGGATACAGCACCCGAGTGGTCGACCTGATC
CGCCACATGAACAGCACCAAGTAAATGAACAAACTGATGAAAGCATGCAAAGAGTGATGA
AAGCATGCAAAGAGAGTTGTGTTTCTTCCCCGGAAGTGCTTCCGAGAATAAATTTTTCTT
ATCTGATTGTCTAAAACCTATAATTGGTGTAATGGTATCGTAGTGGTTGGTTGAGCATTG
AGTGACTCATATTTTGTCAGGTCTATGTGTTATCGTTAAACTTTTAACGGTCATTCTATT
TCAAAAGTTTTGCATTTTGCAATCTTTGACGCTCCATTTCACTTCATAGTTCCACGTCAT
TTCTTCCTTCATTTGGCTATTTGGTTGTCGGCTTC