Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d050978_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:4:134816363:134819668:-1 gene:Zm00001d050978 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar protein sorting-associated protein 20 homolog 2
Sequence

ATGGGGAACATCTTCGTGAAGAAGCCCAAGATCACTGACGTCGATAGGGCCATCCTCACC
CTCAAGACGCAGCGCCGCAAGCTCGCCCAGTTTCAACAGCAGCTTGAGAAGGTAATCGAA
GCAGAAAAGGAAGCTGCACGGCAGTTGGTTCAACAGAAGAAGAGAGACAGAGCTTTGATT
GCTCTGAAGAAGAAGAAAGCTCAGGAAGAGCTGTTGAAACAAGTTGACACATGGCAAATG
AATGTTGAACAACAGCTGGCAGATATTGAACTAGCAAGTAAACAAAAGGCTGTATTTGAA
AGCCTGAAGGCTGGAAATGCTGCCCTGAAGTCTATACAGAATGAGATAAACATTGATGAT
GTCCAAAAGCTGATGGATGACACAGCCGAGGCTAAGGCTTATCAAGATGAAATAAATGCT
GTTCTGGGCGAGCAGCTTTCAGCTGAGGATGAAGAAGCTGTCATGGCCGAGTTTGAAAAT
TTGGAAGCTCAGCTTGCCGTTGAGTCTTTGCCAGACGCTCCTGCTACCGAAGTAAGGCCT
GAAGAGAAAACGAAAGCTCCGGCTGACACAGAAGCTGCTCCTGAGGACATCGATGACGTT
ATTGAGCTTCCTGATGTGCCTACGAAAGTGCCAGAGAGGCCTGAAGCTCCAGAAAAAAAC
AAAGTTTTGGAGGAGCCGCTACCTGCATAA

Peptide Sequence

PEP ID

Zm00001d050978_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:4:134816363:134819668:-1 gene:Zm00001d050978 transcript:Zm00001d050978_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar protein sorting-associated protein 20 homolog 2
Sequence

MGNIFVKKPKITDVDRAILTLKTQRRKLAQFQQQLEKVIEAEKEAARQLVQQKKRDRALI
ALKKKKAQEELLKQVDTWQMNVEQQLADIELASKQKAVFESLKAGNAALKSIQNEINIDD
VQKLMDDTAEAKAYQDEINAVLGEQLSAEDEEAVMAEFENLEAQLAVESLPDAPATEVRP
EEKTKAPADTEAAPEDIDDVIELPDVPTKVPERPEAPEKNKVLEEPLPA

Transcript Sequence

Transcript ID

Zm00001d050978_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:134816363:134819668:-1 gene:Zm00001d050978 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar protein sorting-associated protein 20 homolog 2
Sequence

GTCTCGTCCCCGTCCAGTCCACCTTTTCCTCCTCTCCGACTCCACCGCCGTCACGCCATC
TCGCCGGGGGCGGAACCCCGACCGCGAGTATGGGGAACATCTTCGTGAAGAAGCCCAAGA
TCACTGACGTCGATAGGGCCATCCTCACCCTCAAGACGCAGCGCCGCAAGCTCGCCCAGT
TTCAACAGCAGCTTGAGAAGGTAATCGAAGCAGAAAAGGAAGCTGCACGGCAGTTGGTTC
AACAGAAGAAGAGAGACAGAGCTTTGATTGCTCTGAAGAAGAAGAAAGCTCAGGAAGAGC
TGTTGAAACAAGTTGACACATGGCAAATGAATGTTGAACAACAGCTGGCAGATATTGAAC
TAGCAAGTAAACAAAAGGCTGTATTTGAAAGCCTGAAGGCTGGAAATGCTGCCCTGAAGT
CTATACAGAATGAGATAAACATTGATGATGTCCAAAAGCTGATGGATGACACAGCCGAGG
CTAAGGCTTATCAAGATGAAATAAATGCTGTTCTGGGCGAGCAGCTTTCAGCTGAGGATG
AAGAAGCTGTCATGGCCGAGTTTGAAAATTTGGAAGCTCAGCTTGCCGTTGAGTCTTTGC
CAGACGCTCCTGCTACCGAAGTAAGGCCTGAAGAGAAAACGAAAGCTCCGGCTGACACAG
AAGCTGCTCCTGAGGACATCGATGACGTTATTGAGCTTCCTGATGTGCCTACGAAAGTGC
CAGAGAGGCCTGAAGCTCCAGAAAAAAACAAAGTTTTGGAGGAGCCGCTACCTGCATAAG
TGGATGGAGCTGAGATGAATACGGCACACTTTTAGTTTGCAGGAAATTGTAACATACCCA
CCATTTCATTGTACTATCTCATTCTCAGAATTTCATCGTGTACAGCAAGAAAAATTTGTT
GTCTTTGACTATCAGTTGTCACCAGTTTGGATTTCTCAGTGCCCGTTTATTATCCTATCC
TACGGGGTAAACATAATATTTTTCCATTGTGTTTCTTTGTAAGGCAGAAATGCTGAAGTC
TGCAAGCACATACCTTGTTCCGTATGAATATATACGTGTGTTTTTTTTGTGCCAAAGCTG
TAAAATGTACGGCATTTGTAGGTGCCATTTGTTGCTTGAATTTAATTGGTGGAGCGTGTA
AGATAGAATACTCAAATCAGAGCAGTCTGTCTGTATCGAGTACATTGAATTGCCTATATA
AGGTGCCTTTTTTTGTTTTTG