Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d050972_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:4:134412098:134416823:1 gene:Zm00001d050972 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Aux/IAA-transcription factor 17 description:3-hydroxy-3-methylglutaryl-coenzyme A reductase 2
Sequence	ATGGACGGATCGGCCGCGGAGCTGGAGGCGGCGAAGCGGGTGGTGATGCAGTGGGACTCG TCCTTGGCGTGCGGTGGCGCGGACGAGCCGATGTTGTTCGACGGCGGCGGAAACCGTGCC AAGGCCGACCGGTTCCTCCGTGCCGTCGACGACCTGCACCGGCTCGCGCCGCCATCGCCC GCAGCCGTGGGCAGCCTGCGCCGCCTCTCGTCGTCTTCGACGGCGAGGAGCGGTGCCATG CTGGTCGCTATGACACAGCTCGAGGACGAGTTCCGCCACGTGCTGTCATCGCGCGCCGTC GACCACGAGATCGAGGCGCTCACGTACCTTAGCTTGCTCTCCATCAACGCCGACCGCTCC AACTCGGCCTCCTCCGCCGACCTCCCCGCCGCCGACGAGGACGACTCTGTGTTCTCCTCC ATTGGCCACCGTAGCACCGCCTACCGCTCGCTCCGGAGCATCCGCGAGATCGACCTGCTG CCCGACGACGTCATCGCGGACCTCCGCGCCATCGCGTCCTGCATGGCCGCCGCCGGGCAC GACCGCGAGTGCGCGCAGGTGTACTCGTCCGTCCGCAAGCCCGCTGTCGACGCCTCCCTG CGCCGGCTCGGCGTCGAGCGCCTCAGCATCGGTGACGTCCAGCGCCTCGAGTGGGACGCG CTTGAGGCCAAGATCCGCCGGTGGATCCGCGCCGCCGTCCGCGGCGTCTTCGCCAGTGAG CGTCGCCTCTGCTTCCACATCTTCCACGACCTTCCCATCTCCGCCGCCTCGGTGCCCGCC ACGCACGACACCCCCTTCGCTGAGGCCGTCAAGGGCGCCGCGCTGCAGCTCTTCGGCTTC GCCGAGGCCATCAACATCGGTCACCGCTCCCCCAAGTATCTCTTCAAGATCATAGACCTC CACGATGTACTCTCGGACCTCCTACCGACGTCTCCGACATCTTCGCCGCCTCTAAGGTCG CGGAGTGCATATACGTGCAGGCCGCTGAGATCCAGACGCGCCTCGCCGATGCCGTGA

Peptide Sequence

PEP ID	Zm00001d050972_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:4:134412098:134416823:1 gene:Zm00001d050972 transcript:Zm00001d050972_T004 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Aux/IAA-transcription factor 17 description:3-hydroxy-3-methylglutaryl-coenzyme A reductase 2
Sequence	MDGSAAELEAAKRVVMQWDSSLACGGADEPMLFDGGGNRAKADRFLRAVDDLHRLAPPSP AAVGSLRRLSSSSTARSGAMLVAMTQLEDEFRHVLSSRAVDHEIEALTYLSLLSINADRS NSASSADLPAADEDDSVFSSIGHRSTAYRSLRSIREIDLLPDDVIADLRAIASCMAAAGH DRECAQVYSSVRKPAVDASLRRLGVERLSIGDVQRLEWDALEAKIRRWIRAAVRGVFASE RRLCFHIFHDLPISAASVPATHDTPFAEAVKGAALQLFGFAEAINIGHRSPKYLFKIIDL HDVLSDLLPTSPTSSPPLRSRSAYTCRPLRSRRASPMP

Transcript Sequence

Transcript ID	Zm00001d050972_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:134412098:134416823:1 gene:Zm00001d050972 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Aux/IAA-transcription factor 17 description:3-hydroxy-3-methylglutaryl-coenzyme A reductase 2
Sequence	AGGCTGCCTCCCCTGGTTCTGCCTTCGGTGAATCTGCATTGTCCGCTCGCTTCCGTAAAT CTACACCGTCCGCCCGCCCACGCCCACGTTCGTCCGCCCGCCCACGCCCACGTTCGTCCC CCCACCCCGCGTGAGCTTCGGATCGAGGAAGAGGAGGCGGTGGAGGCGAGGAGTCAACTA AACTTGCCATCCATGGACGGATCGGCCGCGGAGCTGGAGGCGGCGAAGCGGGTGGTGATG CAGTGGGACTCGTCCTTGGCGTGCGGTGGCGCGGACGAGCCGATGTTGTTCGACGGCGGC GGAAACCGTGCCAAGGCCGACCGGTTCCTCCGTGCCGTCGACGACCTGCACCGGCTCGCG CCGCCATCGCCCGCAGCCGTGGGCAGCCTGCGCCGCCTCTCGTCGTCTTCGACGGCGAGG AGCGGTGCCATGCTGGTCGCTATGACACAGCTCGAGGACGAGTTCCGCCACGTGCTGTCA TCGCGCGCCGTCGACCACGAGATCGAGGCGCTCACGTACCTTAGCTTGCTCTCCATCAAC GCCGACCGCTCCAACTCGGCCTCCTCCGCCGACCTCCCCGCCGCCGACGAGGACGACTCT GTGTTCTCCTCCATTGGCCACCGTAGCACCGCCTACCGCTCGCTCCGGAGCATCCGCGAG ATCGACCTGCTGCCCGACGACGTCATCGCGGACCTCCGCGCCATCGCGTCCTGCATGGCC GCCGCCGGGCACGACCGCGAGTGCGCGCAGGTGTACTCGTCCGTCCGCAAGCCCGCTGTC GACGCCTCCCTGCGCCGGCTCGGCGTCGAGCGCCTCAGCATCGGTGACGTCCAGCGCCTC GAGTGGGACGCGCTTGAGGCCAAGATCCGCCGGTGGATCCGCGCCGCCGTCCGCGGCGTC TTCGCCAGTGAGCGTCGCCTCTGCTTCCACATCTTCCACGACCTTCCCATCTCCGCCGCC TCGGTGCCCGCCACGCACGACACCCCCTTCGCTGAGGCCGTCAAGGGCGCCGCGCTGCAG CTCTTCGGCTTCGCCGAGGCCATCAACATCGGTCACCGCTCCCCCAAGTATCTCTTCAAG ATCATAGACCTCCACGATGTACTCTCGGACCTCCTACCGACGTCTCCGACATCTTCGCCG CCTCTAAGGTCGCGGAGTGCATATACGTGCAGGCCGCTGAGATCCAGACGCGCCTCGCCG ATGCCGTGAGAGGGATATTCTCAGAGTTCGAGAACACCGTGCTCCGCGACCCACCCAAGA CCGCGGTGCCTGGCGGTACCGTCCACCCGCTCACTCGCTAGCGCTCGTCTTGCTGCCGAG GGCAATGAGCTCGCGTCGTCCTTAGCTGACCTCGAGCTCCCCGAGCTTGAGAACCAGTTA CCACTTGCCTCTCACATTGTCTGGATCATTGTTATTCTTGAACACAACCTGGAGGGCAAG GCAGCACTCTACAAGGATCCAGCTCTCTCGCATCTGTTCATGATGAACAATGTGCACTAC ATCGTTCACAAGGTGAAAGATTCGTCAGATCTCTGGGGCATGATAGCTGATGATTACCTG AAACGACTTACTGGCAAGTTCACAATGGCGGCCACAAACTACCAGCACGCCTCGTGGTTG AAGATCCTGAATTGTTTGCGTGATGAGGGGCTCCATGTAAGTGGTGGCTTTTTGTCAGGG ATATCCAAGTCGGCACTGCGAGAGCGGTTCAAGTCCTTCAACGCTACATTTGAGGACATG CATAGGGTGGTGCGTGCCAGACAACAAGTTGAGGGAGGAGCTTAGGATCTCGATTGCTGA GAAGCTGCTGCCAGCATACCGGTCATTCCTTGACAGGTTTCGGCATCATATAGAAAATGG GAAGCATCCAGAGCTGTACATTAAGTACTCTATTGAGGACCTTGAGATAGCTGTGGGTGA TTTCTTTGAGGGCGTTCCTCCTTCTCCGCATCACAGGAGGAGATCACATGGGTGAAGAAC CTGTACATCAGGTATTCAACTAGCTGTTGTTGCTATTTATTCTTTTATTCTTCACGAGGA AGCTGGTGCTAGTATTTGGGCTCGATTTCTTCTATCCTGATAGATGTGAGTATAAATTTG GTGATCTTCAATCAAAGATGGCAAATATGAATACATTTTGGGGGTCTTTCTAAAGCTGTC AATCGGCACAGTGGTTCCTACTCCGTAAGAAAAGTTGTTCATTTGGCTTCAATCAAAGAT GTTATATAGATCTTGCAAGTAGCATGTCCATATAGGAAATTTTTTCAGTAACGTGGATAG TTGGAACAACCCATGGCATTTCTGCCCCTGTTTTGCACCAGCCTTTTGTTATTCTTTTCA ATGTTAACAAGTATCCAAAGGGTCTATGCTTTGTGAGTTAGATGTAAAAAGATTTATATA ACTCTCATGTACCACATGATTTTGTAATCTGATAATATCATGCTTTTACAAATTTAAAAA AAAGCTTCAAGTCTTCTCCATGGCACAGTTCTATCCAGATAACTACCAAAGTGGCATTGT TGATCCCTCCATAAGATTTACACTGTTACTATTTTAGTATATGATCAGTAAGTTAGAAAA TGGATGCTATTTGGCAGCAATGTTTTGCTTTGGGATGCTGTCCTTTTGAAAGGCCTCTTT TTACTAGAGTTGAGTTTGTGGTCCCTGACGCTGATTAGTTGATAGTACAAAAAATGTACT GAGAAAAATCTACAAAAGAGAGGTCTTCTATGTCCAAATAATTTTCTTTTGTCCCTTGTT TTCTTTTGGGGTGGATCATGGATGTCAAAGCTGTGCTTATTTAATAGGAAAACAGATTGA GCTATTCAGGACATAAAAATGAAGAATAACAAGTCTGAAATGTCATGCTTGCCACTGTTC ATGTTTCAAAAACATATGTATTTCTTCACAAAAT