Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d050961_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:4:133641572:133644568:-1 gene:Zm00001d050961 gene_biotype:protein_coding transcript_biotype:protein_coding description:N-acetylglucosaminyltransferase III

Sequence

ATGTCAAGGCTGAAGTGCGCACTGCGGGGATTTGATCTGAGGGTTCTCTTGATCCTACTG
ATTGGTGTGCCAATTTTGATCTTTGCCATATATGTGCATGGCCAGAAGGTGACTTACTTC
CTCCGACCAATCTGGGAGAAGCCCCCAAAGCCCTTCACAATACTCCCTCACTATTACCAT
GAAAATGTCTCGATGGGTAACCTATGCAAGTTGCATGGATGGAAAGTCAGGGAGACTCCA
CGCCGTGTCTTTGATGCCGTGCTCTTCAGCAATGAGCTTGACATCCTTGATATCCGCTGG
CACGAGCTTAGCCCGTATGTGTCAGAATTTGTGCTGCTTGAGTCCAATTCAACTTTTACC
GGCATAAAGAAGGACCTTCACTTCAAGGAAAACCGCCAACGGTTTGGCTTTGCAGAGTCA
CGGTTGACCTATGGCATGATAGGTGGAAGGTTTGTGAAGGGAGAGAACCCATTTGTCGAG
GAGTCGTATCAAAGGGTTGCTCTCGACCAGCTCATTAAGATTGCGGGCATCACGGATGAC
GACCTGCTGATCATGTCTGATGTTGATGAGATCCCAAGTGGACACACCATCGACCTCTTG
AGATGGTGCGATGACGTTCCGGAGATACTCCATCTCCAGCTCAGGAACTACCTCTACTCG
TTCCAATTCCTACTTGACGACAAGAGCTGGAGGGCTTCAGTGCACAGATACAGAGCTGGG
AAGACGAGGTATGCACATTTCCGGCAGACGGACGACCTCCTGGCTGATTCAGGGTGGCAC
TGCAGCTTCTGCTTCCGCTACATAAACGACTTCATCTTCAAGATGAAAGCCTACAGCCAC
GTCGACCGGATCAGATTCAAGTACTTCCTGAACCCGAAGAGGATTCAGCATGTGATTTGC
GAAGGGGCTGACCTTTTCGACATGCTTCCCGAAGAGTACACGTTCCAAGAGATCATCGCC
AAGCTGGGGCCTATCCCGAGTACATTCTCCGCCGTTCATCTCCCTGCCTATCTGCTGGAG
CAATTCGATCGGTACAGGTACCTTCTCCCAGGCAACTGCGTTAGAGAGAGTGGCTAG

Peptide Sequence

PEP ID

Zm00001d050961_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:4:133641572:133644568:-1 gene:Zm00001d050961 transcript:Zm00001d050961_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:N-acetylglucosaminyltransferase III

Sequence

MSRLKCALRGFDLRVLLILLIGVPILIFAIYVHGQKVTYFLRPIWEKPPKPFTILPHYYH
ENVSMGNLCKLHGWKVRETPRRVFDAVLFSNELDILDIRWHELSPYVSEFVLLESNSTFT
GIKKDLHFKENRQRFGFAESRLTYGMIGGRFVKGENPFVEESYQRVALDQLIKIAGITDD
DLLIMSDVDEIPSGHTIDLLRWCDDVPEILHLQLRNYLYSFQFLLDDKSWRASVHRYRAG
KTRYAHFRQTDDLLADSGWHCSFCFRYINDFIFKMKAYSHVDRIRFKYFLNPKRIQHVIC
EGADLFDMLPEEYTFQEIIAKLGPIPSTFSAVHLPAYLLEQFDRYRYLLPGNCVRESG

Transcript Sequence

Transcript ID

Zm00001d050961_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:133641572:133644568:-1 gene:Zm00001d050961 gene_biotype:protein_coding transcript_biotype:protein_coding description:N-acetylglucosaminyltransferase III

Sequence

TCGCACCGCAGCAATTCCCCGGCCCCTTCGCACCGTTTCCCTCTGCGCTCCCACCCCCCG
CCCCCCGAAATCACCGCCGCGCCCCGCGTCTCGCCCACGCTCACAAGGAAAGGAGCGCGG
ACCCCTCGAGTAGGGCGAGGTCCGGGCTCCGCTCCCGGTTTCCGGGGAGAGTGCGGAGGA
CCCCCATCGTGCGCGCCCGGGGAGAGGGCGGAGGACCCGATCGTGCCGTCTCAACCCGCT
CCGCACCCGCGCGGCCGCGGGCGTGGTGCTCCTGCTTCTCCGTGCGCCCTCGGCTCCATG
GAGGCCGGCTACTGCAACCGCAAGAAGACCGACGGCATCTGCGAGTCAGTCTGCGACAGC
GAGGTGAGGCACCGCTCCGGCGCGGTGCTTGTCTTTTCCTCTTCCACGCTGCTTAAACGC
GTTTTGCTCCACGCTGAGCTGCTTGCTTGCTTCGACCTTTTCACCGCTCCAGTTGCGCGG
CGTGTTCGCGGCGGCTGCTATTTTGCCGATCTCAGCAGGGTTGCTGTCTTGGATCGGGTG
CTCGTGAGATTTCCACAGCCTGGGATCGCATATGCTCGCTTAATTGCGTCCGCGGCAGGC
ATCTTCCACCTGCCGCGGGTGCTGTGGATTAGGTGGTGCTAAACAAACTGGGGCGCCTGG
ATGCTTCCGGCTGCGCTAGAATCTCTCCACCTGTATGGATCGGGTCGTCTGCCTAATACC
GGAATGAATCTGTCTCTCCACCTGTAAAAGTTTCCAGCTTTTTTTTTTGAACAATCCCCG
ATTGGTTCCCGTGCCGTAGATGGTGAGGGTTCATGCCGCAAAAGTAATTTTACAGGCTGT
TTCCTTCCTTTATATGATACACAAATAAAATTAGCTGATGATTGCTTTCCTCTGTTGGTG
GATCCGCACCAGCCTATCACTGATAGATATATTGTTTTCAAAACAGAAAATGCGCATATT
CCACCAGACCACCGCTTACTTCTTTAATCTACTGCACATGCATTGTTTTGATGGCCTTTA
ACACAGCTGCACACTCACGGCGCGGCGGATATTTTAGAAGCTCGTGTTCTCAACATAGGA
GTTTGTGATGGCTGTGATGTTCCCTATGTTCAGCCGTTGGATTCATGGTGCTATGTCCAG
CACTGTTTCAGAGTACAGTTCATTGTATCTGTCACATGTTGTAGCTTTCCAGTTTACTTC
TAGTTTAATTTATGCCTTGTTATGATGTGTATTGGTGCATGTCTGATTTCTTATTTGCTC
CCTGATACTGTCTGCAGTTTGGCTCGAAGTCAGTCCTGAGCATGTCAAGGCTGAAGTGCG
CACTGCGGGGATTTGATCTGAGGGTTCTCTTGATCCTACTGATTGGTGTGCCAATTTTGA
TCTTTGCCATATATGTGCATGGCCAGAAGGTGACTTACTTCCTCCGACCAATCTGGGAGA
AGCCCCCAAAGCCCTTCACAATACTCCCTCACTATTACCATGAAAATGTCTCGATGGGTA
ACCTATGCAAGTTGCATGGATGGAAAGTCAGGGAGACTCCACGCCGTGTCTTTGATGCCG
TGCTCTTCAGCAATGAGCTTGACATCCTTGATATCCGCTGGCACGAGCTTAGCCCGTATG
TGTCAGAATTTGTGCTGCTTGAGTCCAATTCAACTTTTACCGGCATAAAGAAGGACCTTC
ACTTCAAGGAAAACCGCCAACGGTTTGGCTTTGCAGAGTCACGGTTGACCTATGGCATGA
TAGGTGGAAGGTTTGTGAAGGGAGAGAACCCATTTGTCGAGGAGTCGTATCAAAGGGTTG
CTCTCGACCAGCTCATTAAGATTGCGGGCATCACGGATGACGACCTGCTGATCATGTCTG
ATGTTGATGAGATCCCAAGTGGACACACCATCGACCTCTTGAGATGGTGCGATGACGTTC
CGGAGATACTCCATCTCCAGCTCAGGAACTACCTCTACTCGTTCCAATTCCTACTTGACG
ACAAGAGCTGGAGGGCTTCAGTGCACAGATACAGAGCTGGGAAGACGAGGTATGCACATT
TCCGGCAGACGGACGACCTCCTGGCTGATTCAGGGTGGCACTGCAGCTTCTGCTTCCGCT
ACATAAACGACTTCATCTTCAAGATGAAAGCCTACAGCCACGTCGACCGGATCAGATTCA
AGTACTTCCTGAACCCGAAGAGGATTCAGCATGTGATTTGCGAAGGGGCTGACCTTTTCG
ACATGCTTCCCGAAGAGTACACGTTCCAAGAGATCATCGCCAAGCTGGGGCCTATCCCGA
GTACATTCTCCGCCGTTCATCTCCCTGCCTATCTGCTGGAGCAATTCGATCGGTACAGGT
ACCTTCTCCCAGGCAACTGCGTTAGAGAGAGTGGCTAGGCAGCTGGCTGCCCGCCGTCTG
CATCATGACCCTGAGGCGCACGGACGTCGCTCTCTCGCGGATGTCTGTCTTATGGCGGCG
GGGGTTGTGTCCGATACGATTGGCTGACTTAGTTGAGTGATCGCTTGGCTGCTGGTTGAG
TTCATATGGGATTTTTGTGTACCGTGTAACAGAAACCATGGAAGGCCTGACGGCTGCGTA
GCGCAGCGCGT